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KJC3_000863-T1, KJC3_000863-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000863-T1
Unique NameKJC3_000863-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2155465..2158346-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000863-T1 ID=KJC3_000863-T1|Name=KJC3_000863-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2882bp|location=Sequence derived from alignment at ch1:2155465..2158346- (Aspergillus niger KJC3)
TTAAATTTCGTGTGTGACTCGCGCCGCCCAACCTCTGCGGCTCGGAACCC
TCACAACGGATTTTCCTGCCAGGCAAAAGAACCAGCCCGATCCGCCCTAC
CACCTGCGTGTTATCCCCCCGGCGACGACTGAGACCGCCGTTCTTCGATT
CCCGCGACTTTCCCGATCTCGAGCGTCTGAATAATATCCGCAAACATGTC
GCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCCAGCTCCTCTGAGG
AGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGTCCGAGGAGGAG
TCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCTTCCGAGGACGA
GGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAATGTTTCCGAAA
GCGAAGAGAGCGAGGATGAGGAACGAGTAACTATCGTCAAGAGTGCCAAG
GACAAGCGGTTGGAGGAACTGGAAAACACCGTCAAGTTGATTGAAAATGC
CGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGGTGCGTTTGGCCCTG
GAATCAAAGAATGGAATTGCGGGACCGGCAGCGGAGGGAAGGATGGGTTT
TCGATACTAACATCCGTTTTATAGAGTTTGACAAGCTGAACCGTCAAATC
GTCAAGATTGTCCAGTCTGGCCCGACCCCGAAGATCTACGTCAAGACCGT
TGCGGACCTGGAGGATTTCGTCAACGAGACCATCTCCAAGCAGAAGTCGA
GCAACAAGAAGATGAACGCCAGCAACGCCAAGGGATTCAACGCCGTTAAG
CAGCGTATCAAGAAGAACAACAAGGACTACGCCGTTCAGATCGACAAGTA
CAGGAAGGACAAGGATGGCTTCATGGAAGCCAAGGAGGAAGTGGCCCGTC
CCGTCGCCGCCGCCCCTCGCCTGACCAAGATTGAGCGTATCGAAGCCCCT
GCTCTTTCCACCGCCGGTGATGACGATGGTTTCGCGACCGTTGGCCGTGG
CGGCAAGACCCTCCAGTACACCCCCGAGAGCATCCTGAAGCACCTCCGCG
TTATCGTCGAATCCCGCGGAAAGAAGAACACCGACCGTTTGGAGCAGATC
CGCACGATGGAGAAGCTGTTGGAGGTTGCCCAGACTCCTTACCAGCGTAT
CCGCATCTACTTGACCATGATCTCCACCCGCTTCGATCTCACCTCTTCCT
CTACCAGCAACTACATGGCCGTCGATCAGTGGAAGTTCGCCGAGCAGGAG
TTCGCTACCCTTCTGTCCGTTCTCGAGAACAACCGCACCTATGTCGTGAC
CGAGGGTGCCGAAGAGTGGGAGGATGATGAGAAGCAGCCCACACCCGCCC
CCGGCGAGGTCGTTCACATCCCCGGCAGCATTGTCTCGTATGTCGAGAGA
CTGGATGATGAGCTCACCCGTTCCCTGCAGCACATTGACCCCCACACTGC
CGAGTACATCGACCGTCTGGGTGATGAGAAGCAGCTGTACGCCAACCTTG
TGCGCACCCAGGTCTACGTCGAGGGTCTTACTCAGTCCGAGAAGACCGAT
CCCCGTCAGGACAGCCTTAACCGCGTGGTCATGAGGAGACTGGAGCACAT
CTACTTCAAGCCCTCTCAGGTCGTCACGATCCTGGAGGAAGGTACCTGGA
AGGTCCTTCCCTCCGAATTGGAATCCAACGTCACTCCCCGTGGCAACACG
GGAGATGTGACCAACCTTGTGCAGACCCTTTGCAGCTACCTGTTCAAGCA
CAGCGACGGTATCATCCGTGCTCGTGCGATGCTGTGCCAGATCTACTTCC
TTGCTCTGCACGACCAGTACTACCGCTCTCGTGACCTGATGCTCATGTCC
CACCTTACCGAGAACATCGCCAACTTCGACGTTTCCACCCAGATCCTCTT
CAACCGCACCCTTGTTCAGATCGGTCTGTGTGCCTTCCGGGCCGGCCTGA
TCTACGAGGCTCAGACCACCCTCTCTGAGGTCTGCGGCAGTGGACGTCAG
AAAGAGCTGTTGGCTCAGGGCATCATCCTCCAGCGCTACTCCACCGTCTC
GCCGGAACAGGAGCGTCTGGAGCGTCAGCGTCAGCTGCCCTTCCACATGC
ACATCAACCTGGAGCTTCTCGAGTGCATCTACCTGACGTCGAGCATGTTC
CTGGAGGTCCCTCTGATGGCTCAGACTTCTTCCTCCCCCGAGATGAAGCG
TCGTGTCATCTCCAAGACCTTCCGTCGTATGCTGGACTACAACGAGCGCC
AGGTCTTCACTGGTCCTGCTGAGAACACCCGTGACGGTGTCATCATGAGT
GCCAAGTTCCTCGCCGCCGGAGACTGGAAGAAGGCCGCTGAGATGCTCAA
CTCGATCAAGATCTGGGATCTGATGCCCCAGCCCGACAAGGTCAAGGAGA
TGCTGTCCCAGCAGATCCAGGAGGAGGGTCTCCGCACCTACCTCTTCACC
TACGCCCCCTTCTACGACAGCCTCTCCATCTCCACCCTGGCTACCATGTT
CGAGCTCCCCGAGAAGAAGATCGCCGCTATCATCAGCCGTATGATCTCTC
ACGAGGAACTGGCCGCTGCTCTCGACCAGGTCAACGATGCCATTGTCTTC
CGCAAGGGTGTCGAGTTGTCGCGTCTCCAGTCCCAGATCGTCACCCTCGC
CGACAAGTCGATGAACCTTCTGGAGTCCAACGAAAAGACTCTCGAGCAGC
GTACGCAAGGCATGGCCAACGCCTTCCAGCGCGATCAGGGCGCCGGCGCC
CGTGGTGGCCGTGGTCCTCGAGGTGGTGGCCAAGCCCGTGGTGGTCCCAG
ATTCCCTGGTGGCCAACAAGGTCGTCGGCCTGGTGGACAGCAGTTTAGCG
GTGGTGCATTGGGCGGGGCGATCAAGGCATAA
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Coding sequence (CDS) from alignment at ch1:2155465..2158346-

>KJC3_000863-T1 ID=KJC3_000863-T1|Name=KJC3_000863-T1|organism=Aspergillus niger KJC3|type=CDS|length=5196bp|location=Sequence derived from alignment at ch1:2155465..2158346- (Aspergillus niger KJC3)
AGTTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCG
ACCCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAA
CGAGACCATCTCCAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCA
ACGCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAG
GACTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCAT
GGAAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGA
CCAAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGAC
GATGGTTTCGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCC
CGAGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGA
AGAACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAG
GTTGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGATCTC
CACCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCGTCG
ATCAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTC
GAGAACAACCGCACCTATGTCGTGACCGAGGGTGCCGAAGAGTGGGAGGA
TGATGAGAAGCAGCCCACACCCGCCCCCGGCGAGGTCGTTCACATCCCCG
GCAGCATTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCC
CTGCAGCACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGA
TGAGAAGCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGG
GTCTTACTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGC
GTGGTCATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGT
CACGATCCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAAT
CCAACGTCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAG
ACCCTTTGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCG
TGCGATGCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACC
GCTCTCGTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAAC
TTCGACGTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGG
TCTGTGTGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCT
CTGAGGTCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATC
ATCCTCCAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCG
TCAGCGTCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGT
GCATCTACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAG
ACTTCTTCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCG
TCGTATGCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGA
ACACCCGTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGAC
TGGAAGAAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGAT
GCCCCAGCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGG
AGGGTCTCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTC
TCCATCTCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGC
CGCTATCATCAGCCGTATGATCTCTCACGAGGAACTGGCCGCTGCTCTCG
ACCAGGTCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGT
CTCCAGTCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGA
GTCCAACGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCT
TCCAGCGCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGT
GGTGGCCAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCG
TCGGCCTGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCA
AGGCATAAATGTCGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCC
AGCTCCTCTGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCA
GTCCGAGGAGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCT
CTTCCGAGGACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAG
AATGTTTCCGAAAGCGAAGAGAGCGAGGATGAGGAACGAGTAACTATCGT
CAAGAGTGCCAAGGACAAGCGGTTGGAGGAACTGGAAAACACCGTCAAGT
TGATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAGAG
TTTGACAAGCTGAACCGTCAAATCGTCAAGATTGTCCAGTCTGGCCCGAC
CCCGAAGATCTACGTCAAGACCGTTGCGGACCTGGAGGATTTCGTCAACG
AGACCATCTCCAAGCAGAAGTCGAGCAACAAGAAGATGAACGCCAGCAAC
GCCAAGGGATTCAACGCCGTTAAGCAGCGTATCAAGAAGAACAACAAGGA
CTACGCCGTTCAGATCGACAAGTACAGGAAGGACAAGGATGGCTTCATGG
AAGCCAAGGAGGAAGTGGCCCGTCCCGTCGCCGCCGCCCCTCGCCTGACC
AAGATTGAGCGTATCGAAGCCCCTGCTCTTTCCACCGCCGGTGATGACGA
TGGTTTCGCGACCGTTGGCCGTGGCGGCAAGACCCTCCAGTACACCCCCG
AGAGCATCCTGAAGCACCTCCGCGTTATCGTCGAATCCCGCGGAAAGAAG
AACACCGACCGTTTGGAGCAGATCCGCACGATGGAGAAGCTGTTGGAGGT
TGCCCAGACTCCTTACCAGCGTATCCGCATCTACTTGACCATGATCTCCA
CCCGCTTCGATCTCACCTCTTCCTCTACCAGCAACTACATGGCCGTCGAT
CAGTGGAAGTTCGCCGAGCAGGAGTTCGCTACCCTTCTGTCCGTTCTCGA
GAACAACCGCACCTATGTCGTGACCGAGGGTGCCGAAGAGTGGGAGGATG
ATGAGAAGCAGCCCACACCCGCCCCCGGCGAGGTCGTTCACATCCCCGGC
AGCATTGTCTCGTATGTCGAGAGACTGGATGATGAGCTCACCCGTTCCCT
GCAGCACATTGACCCCCACACTGCCGAGTACATCGACCGTCTGGGTGATG
AGAAGCAGCTGTACGCCAACCTTGTGCGCACCCAGGTCTACGTCGAGGGT
CTTACTCAGTCCGAGAAGACCGATCCCCGTCAGGACAGCCTTAACCGCGT
GGTCATGAGGAGACTGGAGCACATCTACTTCAAGCCCTCTCAGGTCGTCA
CGATCCTGGAGGAAGGTACCTGGAAGGTCCTTCCCTCCGAATTGGAATCC
AACGTCACTCCCCGTGGCAACACGGGAGATGTGACCAACCTTGTGCAGAC
CCTTTGCAGCTACCTGTTCAAGCACAGCGACGGTATCATCCGTGCTCGTG
CGATGCTGTGCCAGATCTACTTCCTTGCTCTGCACGACCAGTACTACCGC
TCTCGTGACCTGATGCTCATGTCCCACCTTACCGAGAACATCGCCAACTT
CGACGTTTCCACCCAGATCCTCTTCAACCGCACCCTTGTTCAGATCGGTC
TGTGTGCCTTCCGGGCCGGCCTGATCTACGAGGCTCAGACCACCCTCTCT
GAGGTCTGCGGCAGTGGACGTCAGAAAGAGCTGTTGGCTCAGGGCATCAT
CCTCCAGCGCTACTCCACCGTCTCGCCGGAACAGGAGCGTCTGGAGCGTC
AGCGTCAGCTGCCCTTCCACATGCACATCAACCTGGAGCTTCTCGAGTGC
ATCTACCTGACGTCGAGCATGTTCCTGGAGGTCCCTCTGATGGCTCAGAC
TTCTTCCTCCCCCGAGATGAAGCGTCGTGTCATCTCCAAGACCTTCCGTC
GTATGCTGGACTACAACGAGCGCCAGGTCTTCACTGGTCCTGCTGAGAAC
ACCCGTGACGGTGTCATCATGAGTGCCAAGTTCCTCGCCGCCGGAGACTG
GAAGAAGGCCGCTGAGATGCTCAACTCGATCAAGATCTGGGATCTGATGC
CCCAGCCCGACAAGGTCAAGGAGATGCTGTCCCAGCAGATCCAGGAGGAG
GGTCTCCGCACCTACCTCTTCACCTACGCCCCCTTCTACGACAGCCTCTC
CATCTCCACCCTGGCTACCATGTTCGAGCTCCCCGAGAAGAAGATCGCCG
CTATCATCAGCCGTATGATCTCTCACGAGGAACTGGCCGCTGCTCTCGAC
CAGGTCAACGATGCCATTGTCTTCCGCAAGGGTGTCGAGTTGTCGCGTCT
CCAGTCCCAGATCGTCACCCTCGCCGACAAGTCGATGAACCTTCTGGAGT
CCAACGAAAAGACTCTCGAGCAGCGTACGCAAGGCATGGCCAACGCCTTC
CAGCGCGATCAGGGCGCCGGCGCCCGTGGTGGCCGTGGTCCTCGAGGTGG
TGGCCAAGCCCGTGGTGGTCCCAGATTCCCTGGTGGCCAACAAGGTCGTC
GGCCTGGTGGACAGCAGTTTAGCGGTGGTGCATTGGGCGGGGCGATCAAG
GCATAAATGTCGCGCTTTTTCTACGGTGGCGGTAGCGACAGCGAGTCCAG
CTCCTCTGAGGAGGAGGAGCTCTACAGTGATCGCGAGGAGGAGGAGCAGT
CCGAGGAGGAGTCCAGCGAGGAAGAGTCTGAGGAGGAGGAGGAGTCCTCT
TCCGAGGACGAGGATGCCGGCAAGACCGGTGCCAACCGTTTCATGAAGAA
TGTTTCCGAAAGCGAAGAGAGCGAGGATGAGGAACGAGTAACTATCGTCA
AGAGTGCCAAGGACAAGCGGTTGGAGGAACTGGAAAACACCGTCAAGTTG
ATTGAAAATGCCGAGAAGATCAGCGACTGGGCGGTTATCTCGACAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005852eukaryotic translation initiation factor 3 complex
Vocabulary: Biological Process
TermDefinition
GO:0006413translational initiation
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0031369translation initiation factor binding
GO:0003743translation initiation factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
NIP1KJC3_000863Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000863-T1KJC3_000863-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000863-T1.cdsKJC3_000863-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000863-T1.exon2KJC3_000863-T1.exon2Aspergillus niger KJC3exon
KJC3_000863-T1.exon1KJC3_000863-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000863-T1.utr5p1KJC3_000863-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092616QN
DBxrefInterPro:IPR036390
DBxrefInterPro:IPR027516
DBxrefInterPro:IPR036388
DBxrefInterPro:IPR008905
DBxrefInterPro:IPR000717
DBxrefPFAM:PF01399
ProductTranslation initiation factor 3 subunit c
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2155465..2158346 -
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