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KJC3_000869-T1, KJC3_000869-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000869-T1
Unique NameKJC3_000869-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2174581..2176987-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000869-T1 ID=KJC3_000869-T1|Name=KJC3_000869-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2407bp|location=Sequence derived from alignment at ch1:2174581..2176987- (Aspergillus niger KJC3)
CCATAGCCTGCTGCGCCAATTTCGACTCTTGATTTTTGAGATCACTTAGA
ATTTGAATCAGATACACGACTGAAAAAGACGTACTTCACTCTTGTTTATA
CGTGCATTCATAGTTCAGCTTGTCAATTACCTAACCTGGACTGGATACAC
GTGCTGGCCTATCACCTGACGATTGCTGAACTTCCCTCCATCTTATAAAC
TGCGCGCTAGCTTTACGATAAATCCTCGCTGCCATCCTATCTTCACTGAC
AGTGGCAATGGCATCCGCTCCCAACCCAGGTCAAACGCTTCCTAGGATGC
CAGTGGTTGTTCCTGCAATGGTTCCTCCCTCGAATGGCGCTGAAGCCTCT
ACAGGGGGTGCTAGTAACACTGACCCCAGTCCTGATGCCTGGGACTCCGA
AATGCAACTTGTTTCCTCGCTCGCGAAACTCCAGAAGATGGAAGCAATGG
TGAGTATAACCCCCTGAGGTCCAAGCTCAAACACCAATTAACTCGTTATG
ACAGATTCACCAACTGCGGACTCTACTCCCTGAGCGCCTTCTGGAACCCC
TGGCACCCATTGTCAACCCCAAGGCCGCTGCGGGAAGACCCGTCCCCAAG
TCCCCGCAAATGCTGTACGAGCAGCTGGCTCAAGCTGCACGCGCGGGTGT
TTCCGAGCTGCAAGAGTTTCAGTCGATGTGGAGAAGTCCCGAGATGAAAG
CGGTCTGGGATCGCATTGACGCGCAGATTAAAGAAAATGGCGGCGTGATG
CTGCAGCCCACGGGGAAATGGGAGAGAGATTACGATACCATTCTTGCGGA
TCTTCGCGAGGAGGAGCAGACTCAGAATGAGCAGCAGCAGAAAGCTAATG
AGGAGATGGAGCGATCGAAGATTCAGGCCACTGAGGGTGGATGGAGAGCG
ATTGTTGAGGGCTTTGCTCAAAAGAATGTGCCTGGTGTGCGTGTTTTGGC
GAGTCAAAGTGAAGCGGCTGTCACGGTTGTGCTTGTCAAAGCTGGGATGG
TGTTCAGAGTTGAGGCTATTGCTGGTCAGGATGGGAATGGTGTTCCTGAC
TGGCGGGTCTTTACTAGGACGCCTGGGGGGCAAACGCCTTCGAAGGTCGA
GACGGCGGTGGCGCAGTGCTTGAATTCAAGGCCTCGACAGTGGGATTTAC
TTTATCTACTTGTAAGACCTGGCCCTTCTTTCTACGTTGCTCAATATGGT
TTATGTGGACAAAACGCTGATATTTTATGTTAGGACATGATATCGTCCTA
CTCAACTATCAAACAGACACCCTGTGCAAAATGCACCAAGATGACCGACA
GCACAGCAACCCTTCCCACCATCCGCAAACCATCCTCTACTCCCCAAGAA
CAGGGAAGTCAAACCTGGGAAGCCTATCATCAAGGCTGCACTGAATGAAA
GAGGAACAAAGAAAACAAAACAAATGAGGAATATATATATCATGAATGAT
GGAATATCCCATTCCAACAATTCCCCAGATGCCTCAACGTCTCATATAAT
CAGACAAGTCGGTCCCAGATTAATATTCACGTCAATGGCATTTCGCGGGT
ATAATCAATGCATGTTCCTCGGAACATCCAACACAAACAAAACCAAAGGT
GCATCTGGCATTCAACACCTACTCCTCCACATCCACCAACTTTGTCGGAA
AGAAACTTGCCACTTTTCCCTCAAAAAGTGGCTCAAGCACCAGCTGACCG
CGAGGCCGACGAGCGCCGTGCTCGTCCCTGACAGCCCTCATGACCGTAAT
TCCCATGGTCCCCTTCGTACATAACAACCACCACCATGGCGGACTGCCCT
TGCGACGGACGAGTACGATGTCGTCAGATCTTGAGGATGACGATCTCTGC
CGATGGGGTGCCGGTGTCGACGACCCAAACAGTGGTATCGTGTCTTGTTC
TCGCTGTTTGCCTTTGTTTCTCCACCTTCTCTTGTGGTGGTGGCTGCTGC
TGCTGGTGGGGATGTTGGTGGGGTTCCAGAAACTGGACATTTTGTTTTTA
TCTTCCGAGAAAATCGGCTTGTGGTCGATGGCGAATCTGTCACGAGGGTG
ACTTAGCAAGAGAAAGTTGGAGTATAGTCAAGGATCGCATCAATTGTGAG
AAACACAAAGAATGATGAGGAGTGAGAAATGGATAATGAAGTCGAGATAG
ATGGACTTATTTGTATCCAACTCCTCACATAGATCCATCGACCCAAGTCG
AGTGCCCGATAATCCAGCCATCAATAAACGCGGTTATCTCCTATATTCTG
AATACTAGCAAGTGTCCGCATCTCGTCCCATGTATCGGTAGAAGTCTTGA
TTATGAGACATTGATAAGTTGATTTTACTTCACTGATGGATGTAGAGTAT
ATCTTAATCTAACTCCCACGATTTAATCTTTGATCTTCCAGTCTGTCAAC
ACTGGTT
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Coding sequence (CDS) from alignment at ch1:2174581..2176987-

>KJC3_000869-T1 ID=KJC3_000869-T1|Name=KJC3_000869-T1|organism=Aspergillus niger KJC3|type=CDS|length=3042bp|location=Sequence derived from alignment at ch1:2174581..2176987- (Aspergillus niger KJC3)
GACATGATATCGTCCTACTCAACTATCAAACAGACACCCTGTGCAAAATG
CACCAAGATGACCGACAGCACAGCAACCCTTCCCACCATCCGCAAACCAT
CCTCTACTCCCCAAGAACAGGGAAGTCAAACCTGGGAAGCCTATCATCAA
GGCTGCACTGAATGAATTCACCAACTGCGGACTCTACTCCCTGAGCGCCT
TCTGGAACCCCTGGCACCCATTGTCAACCCCAAGGCCGCTGCGGGAAGAC
CCGTCCCCAAGTCCCCGCAAATGCTGTACGAGCAGCTGGCTCAAGCTGCA
CGCGCGGGTGTTTCCGAGCTGCAAGAGTTTCAGTCGATGTGGAGAAGTCC
CGAGATGAAAGCGGTCTGGGATCGCATTGACGCGCAGATTAAAGAAAATG
GCGGCGTGATGCTGCAGCCCACGGGGAAATGGGAGAGAGATTACGATACC
ATTCTTGCGGATCTTCGCGAGGAGGAGCAGACTCAGAATGAGCAGCAGCA
GAAAGCTAATGAGGAGATGGAGCGATCGAAGATTCAGGCCACTGAGGGTG
GATGGAGAGCGATTGTTGAGGGCTTTGCTCAAAAGAATGTGCCTGGTGTG
CGTGTTTTGGCGAGTCAAAGTGAAGCGGCTGTCACGGTTGTGCTTGTCAA
AGCTGGGATGGTGTTCAGAGTTGAGGCTATTGCTGGTCAGGATGGGAATG
GTGTTCCTGACTGGCGGGTCTTTACTAGGACGCCTGGGGGGCAAACGCCT
TCGAAGGTCGAGACGGCGGTGGCGCAGTGCTTGAATTCAAGGCCTCGACA
GTGGGATTTACTTTATCTACTTATGGCATCCGCTCCCAACCCAGGTCAAA
CGCTTCCTAGGATGCCAGTGGTTGTTCCTGCAATGGTTCCTCCCTCGAAT
GGCGCTGAAGCCTCTACAGGGGGTGCTAGTAACACTGACCCCAGTCCTGA
TGCCTGGGACTCCGAAATGCAACTTGTTTCCTCGCTCGCGAAACTCCAGA
AGATGGAAGCAATGGACATGATATCGTCCTACTCAACTATCAAACAGACA
CCCTGTGCAAAATGCACCAAGATGACCGACAGCACAGCAACCCTTCCCAC
CATCCGCAAACCATCCTCTACTCCCCAAGAACAGGGAAGTCAAACCTGGG
AAGCCTATCATCAAGGCTGCACTGAATGAATTCACCAACTGCGGACTCTA
CTCCCTGAGCGCCTTCTGGAACCCCTGGCACCCATTGTCAACCCCAAGGC
CGCTGCGGGAAGACCCGTCCCCAAGTCCCCGCAAATGCTGTACGAGCAGC
TGGCTCAAGCTGCACGCGCGGGTGTTTCCGAGCTGCAAGAGTTTCAGTCG
ATGTGGAGAAGTCCCGAGATGAAAGCGGTCTGGGATCGCATTGACGCGCA
GATTAAAGAAAATGGCGGCGTGATGCTGCAGCCCACGGGGAAATGGGAGA
GAGATTACGATACCATTCTTGCGGATCTTCGCGAGGAGGAGCAGACTCAG
AATGAGCAGCAGCAGAAAGCTAATGAGGAGATGGAGCGATCGAAGATTCA
GGCCACTGAGGGTGGATGGAGAGCGATTGTTGAGGGCTTTGCTCAAAAGA
ATGTGCCTGGTGTGCGTGTTTTGGCGAGTCAAAGTGAAGCGGCTGTCACG
GTTGTGCTTGTCAAAGCTGGGATGGTGTTCAGAGTTGAGGCTATTGCTGG
TCAGGATGGGAATGGTGTTCCTGACTGGCGGGTCTTTACTAGGACGCCTG
GGGGGCAAACGCCTTCGAAGGTCGAGACGGCGGTGGCGCAGTGCTTGAAT
TCAAGGCCTCGACAGTGGGATTTACTTTATCTACTTATGGCATCCGCTCC
CAACCCAGGTCAAACGCTTCCTAGGATGCCAGTGGTTGTTCCTGCAATGG
TTCCTCCCTCGAATGGCGCTGAAGCCTCTACAGGGGGTGCTAGTAACACT
GACCCCAGTCCTGATGCCTGGGACTCCGAAATGCAACTTGTTTCCTCGCT
CGCGAAACTCCAGAAGATGGAAGCAATGGACATGATATCGTCCTACTCAA
CTATCAAACAGACACCCTGTGCAAAATGCACCAAGATGACCGACAGCACA
GCAACCCTTCCCACCATCCGCAAACCATCCTCTACTCCCCAAGAACAGGG
AAGTCAAACCTGGGAAGCCTATCATCAAGGCTGCACTGAATGAATTCACC
AACTGCGGACTCTACTCCCTGAGCGCCTTCTGGAACCCCTGGCACCCATT
GTCAACCCCAAGGCCGCTGCGGGAAGACCCGTCCCCAAGTCCCCGCAAAT
GCTGTACGAGCAGCTGGCTCAAGCTGCACGCGCGGGTGTTTCCGAGCTGC
AAGAGTTTCAGTCGATGTGGAGAAGTCCCGAGATGAAAGCGGTCTGGGAT
CGCATTGACGCGCAGATTAAAGAAAATGGCGGCGTGATGCTGCAGCCCAC
GGGGAAATGGGAGAGAGATTACGATACCATTCTTGCGGATCTTCGCGAGG
AGGAGCAGACTCAGAATGAGCAGCAGCAGAAAGCTAATGAGGAGATGGAG
CGATCGAAGATTCAGGCCACTGAGGGTGGATGGAGAGCGATTGTTGAGGG
CTTTGCTCAAAAGAATGTGCCTGGTGTGCGTGTTTTGGCGAGTCAAAGTG
AAGCGGCTGTCACGGTTGTGCTTGTCAAAGCTGGGATGGTGTTCAGAGTT
GAGGCTATTGCTGGTCAGGATGGGAATGGTGTTCCTGACTGGCGGGTCTT
TACTAGGACGCCTGGGGGGCAAACGCCTTCGAAGGTCGAGACGGCGGTGG
CGCAGTGCTTGAATTCAAGGCCTCGACAGTGGGATTTACTTTATCTACTT
ATGGCATCCGCTCCCAACCCAGGTCAAACGCTTCCTAGGATGCCAGTGGT
TGTTCCTGCAATGGTTCCTCCCTCGAATGGCGCTGAAGCCTCTACAGGGG
GTGCTAGTAACACTGACCCCAGTCCTGATGCCTGGGACTCCGAAATGCAA
CTTGTTTCCTCGCTCGCGAAACTCCAGAAGATGGAAGCAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016592mediator complex
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000869KJC3_000869Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000869-T1KJC3_000869-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000869-T1.cdsKJC3_000869-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000869-T1.utr3p1KJC3_000869-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000869-T1.exon3KJC3_000869-T1.exon3Aspergillus niger KJC3exon
KJC3_000869-T1.exon2KJC3_000869-T1.exon2Aspergillus niger KJC3exon
KJC3_000869-T1.exon1KJC3_000869-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000869-T1.utr5p1KJC3_000869-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR021627
DBxrefPFAM:PF11571
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2174581..2176987 -
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