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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2197552..2199164- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000877-T1 ID=KJC3_000877-T1|Name=KJC3_000877-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1613bp|location=Sequence derived from alignment at ch1:2197552..2199164- (Aspergillus niger KJC3)
GGTGAGTGAAGAATAATTTAACCCAGGCTGGGCGCCCCTCGCCCCTTCCC
GCCAGCTAATGTTCACGTCGCCTTCAACTTAGTACTGGAATAACCCATCA
GATGCAATGCCTGCCAAACGATCAACCACCCAAGCCAAGCCTTTCAGATA
TGTCGATGAGTGTCAAACACGCTCAAGTGCAAGCCTTGGGGATCTCAAAC
TTGGCAGAATTCGCGTCGATTGCTGCTTTCTGATATCCAAGACGCAGTGG
GGTAAGCTTCGTGGACAGGATGCAGGACTGATGTATTTGGATCTCACATT
TCATCAACCCACCGACTGCAAGCTCTCACAAGCGACCATTACCATGAACT
TCCATGAGGCCGAGCACCGGAGGAGGCGAATTAACACAGGTCTCGAGGTC
ACTGAGTTCTTTGGACCAAAAATCCTCACCGGGGAGAAACGAGAGCGACA
AGTGTCGAAGTCTTTCGAGGCCACTCCCAAAGTAGGCACCGCTAATGCCA
GTGTCGAAGGTATTGGCATTTCACGAAAGACTCAAGCCAGTTATGCGTCG
CGGTGGAAATTCACTGGTTCCCGATTTACGGATGACTCTGATGACGAATC
ATATACTCCAAACAATCGATATAGACAGCTTGTTTGGCACCTGGAAGAAA
ATGAACTAGAGCGACAAGCGGTTCACCACTCAATCGTGCACACTGCACTT
ACCTTCCATCATGACTCCTCTCCATTCTACCTCGACCTGCAGATCGAAGT
CAAGATGCAGCGATGGCATCACCGAGTCCGGCAACGCCTTGTTTGTCCGC
CACGGAATAAGAAGGCCCTTACTCGAGCTAAGATCAAGCCCGTCGTCTCT
GCAACAGACGATCCTTACTTTTCCAAGTTAGTCAGGAATATAGATCAAGT
TATGGTCGAAGAGAACTTACATCCAGTGGCAGGTAAGTCACTCTGGAGAT
CGGCAACTCACTGAACATATTCATTAAGAGACTTACAGAAGTATCCGACC
CCAAACCTGCTGCTGTTCCAGATGACACACTAGGCAAAGATCCTGACACG
GAATTTAGCGAGATCTGTCTTCCGAATGAAGCCTTGCTCGAGCTGGCACG
ACAGTTGACTGGAAACAAATCTCCAAGTACCCTGGCGCCGCCCAGGAGCA
GCTCGGCTGCATCCACACAGACCGTGAACAGCTCTGACTCTACCCTTGTC
GAATCTGAGACGATAAGCCAGTCCGATGAACAGGCAGAAATAAAATGTAC
CAGTTCCGAGGCTGGTAATCCGATAACCGTCGATCCTCCTAAGGAGATTA
TCAAGACCACTACGATCCCGGAACATGCATCCCGCGTGGCACTCTCTGGG
GCTCGGCATACTTCGCAAGTTCTGGCGGCTTTGATAGCATGGCTAATCCT
GGGTTTGAATGGACTACACGCGGGGCTTACTCGAGCTGGTAGGGGCCTTG
AAAAGAGCTGATGTCGCATTATGCGGTCAGACTACGTCGACATCATGTAT
TGAGCTCCAGAGCTGGACTCATGTCTTTCATTGTTCTTTCTCTTTCCTGC
TTTATAGATTTTTATTCTGTATAATAAATATTTACAATTCATATCATTAC
CTCAGTTCAATCA back to topCoding sequence (CDS) from alignment at ch1:2197552..2199164- >KJC3_000877-T1 ID=KJC3_000877-T1|Name=KJC3_000877-T1|organism=Aspergillus niger KJC3|type=CDS|length=2598bp|location=Sequence derived from alignment at ch1:2197552..2199164- (Aspergillus niger KJC3)
AAGTATCCGACCCCAAACCTGCTGCTGTTCCAGATGACACACTAGGCAAA
GATCCTGACACGGAATTTAGCGAGATCTGTCTTCCGAATGAAGCCTTGCT
CGAGCTGGCACGACAGTTGACTGGAAACAAATCTCCAAGTACCCTGGCGC
CGCCCAGGAGCAGCTCGGCTGCATCCACACAGACCGTGAACAGCTCTGAC
TCTACCCTTGTCGAATCTGAGACGATAAGCCAGTCCGATGAACAGGCAGA
AATAAAATGTACCAGTTCCGAGGCTGGTAATCCGATAACCGTCGATCCTC
CTAAGGAGATTATCAAGACCACTACGATCCCGGAACATGCATCCCGCGTG
GCACTCTCTGGGGCTCGGCATACTTCGCAAGTTCTGGCGGCTTTGATAGC
ATGGCTAATCCTGGGTTTGAATGGACTACACGCGGGGCTTACTCGAGCTG
GTAGGGGCCTTGAAAAGAGCTGAATGCCTGCCAAACGATCAACCACCCAA
GCCAAGCCTTTCAGATATGTCGATGAGTGTCAAACACGCTCAAGTGCAAG
CCTTGGGGATCTCAAACTTGGCAGAATTCGCGTCGATTGCTGCTTTCTGA
TATCCAAGACGCAGTGGGGTAAGCTTCGTGGACAGGATGCAGGACTGATG
TATTTGGATCTCACATTTCATCAACCCACCGACTGCAAGCTCTCACAAGC
GACCATTACCATGAACTTCCATGAGGCCGAGCACCGGAGGAGGCGAATTA
ACACAGGTCTCGAGGTCACTGAGTTCTTTGGACCAAAAATCCTCACCGGG
GAGAAACGAGAGCGACAAGTGTCGAAGTCTTTCGAGGCCACTCCCAAAGT
AGGCACCGCTAATGCCAGTGTCGAAGGTATTGGCATTTCACGAAAGACTC
AAGCCAGTTATGCGTCGCGGTGGAAATTCACTGGTTCCCGATTTACGGAT
GACTCTGATGACGAATCATATACTCCAAACAATCGATATAGACAGCTTGT
TTGGCACCTGGAAGAAAATGAACTAGAGCGACAAGCGGTTCACCACTCAA
TCGTGCACACTGCACTTACCTTCCATCATGACTCCTCTCCATTCTACCTC
GACCTGCAGATCGAAGTCAAGATGCAGCGATGGCATCACCGAGTCCGGCA
ACGCCTTGTTTGTCCGCCACGGAATAAGAAGGCCCTTACTCGAGCTAAGA
TCAAGCCCGTCGTCTCTGCAACAGACGATCCTTACTTTTCCAAGTTAGTC
AGGAATATAGATCAAGTTATGGTCGAAGAGAACTTACATCCAGTGGCAGA
AGTATCCGACCCCAAACCTGCTGCTGTTCCAGATGACACACTAGGCAAAG
ATCCTGACACGGAATTTAGCGAGATCTGTCTTCCGAATGAAGCCTTGCTC
GAGCTGGCACGACAGTTGACTGGAAACAAATCTCCAAGTACCCTGGCGCC
GCCCAGGAGCAGCTCGGCTGCATCCACACAGACCGTGAACAGCTCTGACT
CTACCCTTGTCGAATCTGAGACGATAAGCCAGTCCGATGAACAGGCAGAA
ATAAAATGTACCAGTTCCGAGGCTGGTAATCCGATAACCGTCGATCCTCC
TAAGGAGATTATCAAGACCACTACGATCCCGGAACATGCATCCCGCGTGG
CACTCTCTGGGGCTCGGCATACTTCGCAAGTTCTGGCGGCTTTGATAGCA
TGGCTAATCCTGGGTTTGAATGGACTACACGCGGGGCTTACTCGAGCTGG
TAGGGGCCTTGAAAAGAGCTGAATGCCTGCCAAACGATCAACCACCCAAG
CCAAGCCTTTCAGATATGTCGATGAGTGTCAAACACGCTCAAGTGCAAGC
CTTGGGGATCTCAAACTTGGCAGAATTCGCGTCGATTGCTGCTTTCTGAT
ATCCAAGACGCAGTGGGGTAAGCTTCGTGGACAGGATGCAGGACTGATGT
ATTTGGATCTCACATTTCATCAACCCACCGACTGCAAGCTCTCACAAGCG
ACCATTACCATGAACTTCCATGAGGCCGAGCACCGGAGGAGGCGAATTAA
CACAGGTCTCGAGGTCACTGAGTTCTTTGGACCAAAAATCCTCACCGGGG
AGAAACGAGAGCGACAAGTGTCGAAGTCTTTCGAGGCCACTCCCAAAGTA
GGCACCGCTAATGCCAGTGTCGAAGGTATTGGCATTTCACGAAAGACTCA
AGCCAGTTATGCGTCGCGGTGGAAATTCACTGGTTCCCGATTTACGGATG
ACTCTGATGACGAATCATATACTCCAAACAATCGATATAGACAGCTTGTT
TGGCACCTGGAAGAAAATGAACTAGAGCGACAAGCGGTTCACCACTCAAT
CGTGCACACTGCACTTACCTTCCATCATGACTCCTCTCCATTCTACCTCG
ACCTGCAGATCGAAGTCAAGATGCAGCGATGGCATCACCGAGTCCGGCAA
CGCCTTGTTTGTCCGCCACGGAATAAGAAGGCCCTTACTCGAGCTAAGAT
CAAGCCCGTCGTCTCTGCAACAGACGATCCTTACTTTTCCAAGTTAGTCA
GGAATATAGATCAAGTTATGGTCGAAGAGAACTTACATCCAGTGGCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000877-T1.utr3p1 | KJC3_000877-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000877-T1.utr5p1 | KJC3_000877-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2197552..2199164 - |
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