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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2203042..2204115+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000879-T1 ID=KJC3_000879-T1|Name=KJC3_000879-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1074bp|location=Sequence derived from alignment at ch1:2203042..2204115+ (Aspergillus niger KJC3)
CTTTTCTCTCCATGTTCAGCATTCCCATCGAACCTCACTTGTCACCTCCG
CCATGCCCGCCAACGCCATCACCATCATCTTCTCACCCTACCACGTCGGC
ATCCGCGACCACCGAGTTGGCAACGGCCCCCACCGCATCCGCCAACACGG
AATCATCCAAGCCCTCGAAGACCTAGGCGTAAAAGTCAACTTCATCGAAC
TCGACCGTGTCGACGAATTCGAAGGCGAAATTGGTCGCAGCTTCGAGCTC
CTCCGACGCACATCTACGGCCGTCACCCAAGCCGTGAAAAACAACACCTT
CCCTATCATCCTATCAGGCAACTGCATGGCAAGCGCAGCGGTAGCCTGCG
GTCTCAACACCGATGATCTGAAATTCATCTACTTCGACGCTCACGATGAT
CTCGACTCACCGGACGTCAACGAGAACGGCTATCTCGACGCGATGGGACT
TTCCATGCTCCGTGGGGAGAGCTGGAAGACTCTTACGAGGACGGTTCCGG
GATTCAAGCCTTTCACTTATGATGGCAACTTTTTGTACTGTGGGCTACGG
GATCAGAGCGATGTTCAGCGTCAGAGGGTATTTGATGCGGGGATGGTTGC
CATATGGGGTGAAACCGAGCGTAAGGTTGATTTTGTGGGTGAGTTGAGTA
AGCAGTTGGAAGCAAAGTCGTATGATCCGGCTTTGGTGCATTTGGATTTG
GATGTATTGGACGAGTCATATGGGAAGGTTAATGATTATCCTTCTCCCGG
GGGATTATTTGAGTCCGAATTGTTGGGTTGTATGGATCTTGTACCTAGGA
GGAGTACGCCTAGGTCTTTGACTGTCTGTTCTTTTGATCCTGATGCGGGC
GATGGGGATAGGATTGCGGTGATTGCTGTTCGTGCGGTTACTTCTTTTGT
TCAGTCTTTGTTGGATACAGGGGCTTTGATTAATGATGCTTAATTCAGTT
GTAAAACGAACTTATAGTCTGAAGGTCGGCAGATGTCTCATGATTAGGGC
TGGCTGCTATGTGTAACGCGGAGCTGCGTAGCCAAGGAACACGCTTTCTA
TATACTACATGGTCAAAAGTCTCG back to topCoding sequence (CDS) from alignment at ch1:2203042..2204115+ >KJC3_000879-T1 ID=KJC3_000879-T1|Name=KJC3_000879-T1|organism=Aspergillus niger KJC3|type=CDS|length=891bp|location=Sequence derived from alignment at ch1:2203042..2204115+ (Aspergillus niger KJC3)
ATGCCCGCCAACGCCATCACCATCATCTTCTCACCCTACCACGTCGGCAT
CCGCGACCACCGAGTTGGCAACGGCCCCCACCGCATCCGCCAACACGGAA
TCATCCAAGCCCTCGAAGACCTAGGCGTAAAAGTCAACTTCATCGAACTC
GACCGTGTCGACGAATTCGAAGGCGAAATTGGTCGCAGCTTCGAGCTCCT
CCGACGCACATCTACGGCCGTCACCCAAGCCGTGAAAAACAACACCTTCC
CTATCATCCTATCAGGCAACTGCATGGCAAGCGCAGCGGTAGCCTGCGGT
CTCAACACCGATGATCTGAAATTCATCTACTTCGACGCTCACGATGATCT
CGACTCACCGGACGTCAACGAGAACGGCTATCTCGACGCGATGGGACTTT
CCATGCTCCGTGGGGAGAGCTGGAAGACTCTTACGAGGACGGTTCCGGGA
TTCAAGCCTTTCACTTATGATGGCAACTTTTTGTACTGTGGGCTACGGGA
TCAGAGCGATGTTCAGCGTCAGAGGGTATTTGATGCGGGGATGGTTGCCA
TATGGGGTGAAACCGAGCGTAAGGTTGATTTTGTGGGTGAGTTGAGTAAG
CAGTTGGAAGCAAAGTCGTATGATCCGGCTTTGGTGCATTTGGATTTGGA
TGTATTGGACGAGTCATATGGGAAGGTTAATGATTATCCTTCTCCCGGGG
GATTATTTGAGTCCGAATTGTTGGGTTGTATGGATCTTGTACCTAGGAGG
AGTACGCCTAGGTCTTTGACTGTCTGTTCTTTTGATCCTGATGCGGGCGA
TGGGGATAGGATTGCGGTGATTGCTGTTCGTGCGGTTACTTCTTTTGTTC
AGTCTTTGTTGGATACAGGGGCTTTGATTAATGATGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046872 | metal ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000879-T1.utr5p1 | KJC3_000879-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000879-T1.utr3p1 | KJC3_000879-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR023696 |
| DBxref | InterPro:IPR006035 |
| DBxref | PFAM:PF00491 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2203042..2204115 + |
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