You are here

Home

KJC3_000881-T1, KJC3_000881-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000881-T1
Unique NameKJC3_000881-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2208219..2209911-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000881-T1 ID=KJC3_000881-T1|Name=KJC3_000881-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1693bp|location=Sequence derived from alignment at ch1:2208219..2209911- (Aspergillus niger KJC3)
CTTCTGGCTGTCAGATTAATAGGCGGCCCACTTGCCAACTGAGAGTTGCA
AATATAAGTTCTTGGAGCTGTTCTGGTGGGCGACGGCTTACAACTTTATT
TACCTCCTCCTCATTTCCTTATTCTAGAACGTCGCCGCTCCATCGAGTGA
CGCGAAAACCTCGAACAGATCAAAACACAGACTTTTGGGCCACGGCTTCT
AGATTATGGCCCCGAACAACACGTCATATTTAATCGTCGGCGCCGGAGTG
TTCGGTGTATCGACCGCCTACCACCTGATTCAGAAATACCCCAATGCGAC
CGTAACTTTGGTGGACCGAGATGCATACGATGCCGAGTCTCGTGTGGCCG
CCTCATGGGATTGGAACAAAGTCGTTCGTGCAGACTACGATGACATGACA
TATTGCAAATTAGCTCTCGAAGCGCAGGAAATCTTCAAGTCCGATCCACT
TTGGCAACCATACTTTCATCAGACGGGTGTCTATTGGACATGTCGCAGCG
ACTATGCGCAAAACGTCATCACCAATCACAAGAAGCTTGGCCGCAACGAC
GATATCATTGCCCTTCCGGTCGCCGAAGCTCGAAAGCTATATAACGGAAT
TTTTGACAATGCGGATTATACTGGGGTCAAAGAGGTTCTCATCAATCGGG
CCAGTGGCTGGGCTGCTGCTGGAGACGCCCTTCGAGCAGTGACCAAAAAG
TGCTTAGATCTGGGAGTCAAGTATGTCAAGGCTGATATTGCGACTTTGGA
ATTTGATGGTCGCGGCTCTTGCATTGGCGTCAGGACGAGAGATGGAGATG
TTCTATCGGCTTCACGGGTCGTAATTGCTGCCGGAGCGTTCACTCCCACC
CTGTTGGAATGGAGCGCTGCGAAGAGCGGCAACGGAGGTCTAAGAGCCGG
TGATCGTATCTTGGCCGCTGGTATCACGACAGGAATGGCACAGCTTGACA
AGGAGCAGTATGAACGGTTCAAGGATATGCCTGTTGGTTTCCAAGGCTAT
ACACCGGAAGAGGGTAAGTTGCCATCATTCGGAACATGCCTGTGAACCAA
CTAAGAATATCTCAGGCAAGCCCTTCATTGGCACCATTCCTCCGACTAAG
GATGGAGAGTTGAAATGGTGGGGTTCCAAGATTTTTACAAACACTCGCGA
GGTTCTACCAGGCCGCCACATCTCCTCTCCTCCTCCCACGGATGATTACA
ACCAATGGAAGGTTCCCGGACCTCTGAAGCAAGATATTGTCGAGTCAAGA
AACTTGTGGTATGGGCCTAAGAGCGCTGAATGGAAGATGACGAAGCACCG
AATTTGCTGGTTTGTACTCCTTTTAATTGTGACCTTCGAAAGAATTTCAG
GTCTAATGATCCCCAGGGACGCTTTTACCACTTCTGCCGACTTTATTATC
TCTCCTCACCCCGCCTCCAAAGGGCTATATGTGGCAACCTGCGGCTCATT
CCACGGATACAAGTTCTTCCCTGTGCTTGGAAAATACATCCTTCAAATGA
TTGAAGGTGAGCTGGAACCGGAGCTGGTTGAGAAATGGGCATGGGACCGA
CAGCGCCCTGATTCATCCCAAAATGTTGAATATCCGAACGCGGAGATGAA
GCATCTTCTGGAGCCCCCAGCGAAGCTCTAGTGAAGAGACAAAATCACTT
CTGAGTATTATGCCACGAGAACAAGATCACGGTAAACATGTGT
back to top

Coding sequence (CDS) from alignment at ch1:2208219..2209911-

>KJC3_000881-T1 ID=KJC3_000881-T1|Name=KJC3_000881-T1|organism=Aspergillus niger KJC3|type=CDS|length=3951bp|location=Sequence derived from alignment at ch1:2208219..2209911- (Aspergillus niger KJC3)
GGACGCTTTTACCACTTCTGCCGACTTTATTATCTCTCCTCACCCCGCCT
CCAAAGGGCTATATGTGGCAACCTGCGGCTCATTCCACGGATACAAGTTC
TTCCCTGTGCTTGGAAAATACATCCTTCAAATGATTGAAGGTGAGCTGGA
ACCGGAGCTGGTTGAGAAATGGGCATGGGACCGACAGCGCCCTGATTCAT
CCCAAAATGTTGAATATCCGAACGCGGAGATGAAGCATCTTCTGGAGCCC
CCAGCGAAGCTCTAGGCAAGCCCTTCATTGGCACCATTCCTCCGACTAAG
GATGGAGAGTTGAAATGGTGGGGTTCCAAGATTTTTACAAACACTCGCGA
GGTTCTACCAGGCCGCCACATCTCCTCTCCTCCTCCCACGGATGATTACA
ACCAATGGAAGGTTCCCGGACCTCTGAAGCAAGATATTGTCGAGTCAAGA
AACTTGTGGTATGGGCCTAAGAGCGCTGAATGGAAGATGACGAAGCACCG
AATTTGCTGATGGCCCCGAACAACACGTCATATTTAATCGTCGGCGCCGG
AGTGTTCGGTGTATCGACCGCCTACCACCTGATTCAGAAATACCCCAATG
CGACCGTAACTTTGGTGGACCGAGATGCATACGATGCCGAGTCTCGTGTG
GCCGCCTCATGGGATTGGAACAAAGTCGTTCGTGCAGACTACGATGACAT
GACATATTGCAAATTAGCTCTCGAAGCGCAGGAAATCTTCAAGTCCGATC
CACTTTGGCAACCATACTTTCATCAGACGGGTGTCTATTGGACATGTCGC
AGCGACTATGCGCAAAACGTCATCACCAATCACAAGAAGCTTGGCCGCAA
CGACGATATCATTGCCCTTCCGGTCGCCGAAGCTCGAAAGCTATATAACG
GAATTTTTGACAATGCGGATTATACTGGGGTCAAAGAGGTTCTCATCAAT
CGGGCCAGTGGCTGGGCTGCTGCTGGAGACGCCCTTCGAGCAGTGACCAA
AAAGTGCTTAGATCTGGGAGTCAAGTATGTCAAGGCTGATATTGCGACTT
TGGAATTTGATGGTCGCGGCTCTTGCATTGGCGTCAGGACGAGAGATGGA
GATGTTCTATCGGCTTCACGGGTCGTAATTGCTGCCGGAGCGTTCACTCC
CACCCTGTTGGAATGGAGCGCTGCGAAGAGCGGCAACGGAGGTCTAAGAG
CCGGTGATCGTATCTTGGCCGCTGGTATCACGACAGGAATGGCACAGCTT
GACAAGGAGCAGTATGAACGGTTCAAGGATATGCCTGTTGGTTTCCAAGG
CTATACACCGGAAGAGGGGACGCTTTTACCACTTCTGCCGACTTTATTAT
CTCTCCTCACCCCGCCTCCAAAGGGCTATATGTGGCAACCTGCGGCTCAT
TCCACGGATACAAGTTCTTCCCTGTGCTTGGAAAATACATCCTTCAAATG
ATTGAAGGTGAGCTGGAACCGGAGCTGGTTGAGAAATGGGCATGGGACCG
ACAGCGCCCTGATTCATCCCAAAATGTTGAATATCCGAACGCGGAGATGA
AGCATCTTCTGGAGCCCCCAGCGAAGCTCTAGGCAAGCCCTTCATTGGCA
CCATTCCTCCGACTAAGGATGGAGAGTTGAAATGGTGGGGTTCCAAGATT
TTTACAAACACTCGCGAGGTTCTACCAGGCCGCCACATCTCCTCTCCTCC
TCCCACGGATGATTACAACCAATGGAAGGTTCCCGGACCTCTGAAGCAAG
ATATTGTCGAGTCAAGAAACTTGTGGTATGGGCCTAAGAGCGCTGAATGG
AAGATGACGAAGCACCGAATTTGCTGATGGCCCCGAACAACACGTCATAT
TTAATCGTCGGCGCCGGAGTGTTCGGTGTATCGACCGCCTACCACCTGAT
TCAGAAATACCCCAATGCGACCGTAACTTTGGTGGACCGAGATGCATACG
ATGCCGAGTCTCGTGTGGCCGCCTCATGGGATTGGAACAAAGTCGTTCGT
GCAGACTACGATGACATGACATATTGCAAATTAGCTCTCGAAGCGCAGGA
AATCTTCAAGTCCGATCCACTTTGGCAACCATACTTTCATCAGACGGGTG
TCTATTGGACATGTCGCAGCGACTATGCGCAAAACGTCATCACCAATCAC
AAGAAGCTTGGCCGCAACGACGATATCATTGCCCTTCCGGTCGCCGAAGC
TCGAAAGCTATATAACGGAATTTTTGACAATGCGGATTATACTGGGGTCA
AAGAGGTTCTCATCAATCGGGCCAGTGGCTGGGCTGCTGCTGGAGACGCC
CTTCGAGCAGTGACCAAAAAGTGCTTAGATCTGGGAGTCAAGTATGTCAA
GGCTGATATTGCGACTTTGGAATTTGATGGTCGCGGCTCTTGCATTGGCG
TCAGGACGAGAGATGGAGATGTTCTATCGGCTTCACGGGTCGTAATTGCT
GCCGGAGCGTTCACTCCCACCCTGTTGGAATGGAGCGCTGCGAAGAGCGG
CAACGGAGGTCTAAGAGCCGGTGATCGTATCTTGGCCGCTGGTATCACGA
CAGGAATGGCACAGCTTGACAAGGAGCAGTATGAACGGTTCAAGGATATG
CCTGTTGGTTTCCAAGGCTATACACCGGAAGAGGGGACGCTTTTACCACT
TCTGCCGACTTTATTATCTCTCCTCACCCCGCCTCCAAAGGGCTATATGT
GGCAACCTGCGGCTCATTCCACGGATACAAGTTCTTCCCTGTGCTTGGAA
AATACATCCTTCAAATGATTGAAGGTGAGCTGGAACCGGAGCTGGTTGAG
AAATGGGCATGGGACCGACAGCGCCCTGATTCATCCCAAAATGTTGAATA
TCCGAACGCGGAGATGAAGCATCTTCTGGAGCCCCCAGCGAAGCTCTAGG
CAAGCCCTTCATTGGCACCATTCCTCCGACTAAGGATGGAGAGTTGAAAT
GGTGGGGTTCCAAGATTTTTACAAACACTCGCGAGGTTCTACCAGGCCGC
CACATCTCCTCTCCTCCTCCCACGGATGATTACAACCAATGGAAGGTTCC
CGGACCTCTGAAGCAAGATATTGTCGAGTCAAGAAACTTGTGGTATGGGC
CTAAGAGCGCTGAATGGAAGATGACGAAGCACCGAATTTGCTGATGGCCC
CGAACAACACGTCATATTTAATCGTCGGCGCCGGAGTGTTCGGTGTATCG
ACCGCCTACCACCTGATTCAGAAATACCCCAATGCGACCGTAACTTTGGT
GGACCGAGATGCATACGATGCCGAGTCTCGTGTGGCCGCCTCATGGGATT
GGAACAAAGTCGTTCGTGCAGACTACGATGACATGACATATTGCAAATTA
GCTCTCGAAGCGCAGGAAATCTTCAAGTCCGATCCACTTTGGCAACCATA
CTTTCATCAGACGGGTGTCTATTGGACATGTCGCAGCGACTATGCGCAAA
ACGTCATCACCAATCACAAGAAGCTTGGCCGCAACGACGATATCATTGCC
CTTCCGGTCGCCGAAGCTCGAAAGCTATATAACGGAATTTTTGACAATGC
GGATTATACTGGGGTCAAAGAGGTTCTCATCAATCGGGCCAGTGGCTGGG
CTGCTGCTGGAGACGCCCTTCGAGCAGTGACCAAAAAGTGCTTAGATCTG
GGAGTCAAGTATGTCAAGGCTGATATTGCGACTTTGGAATTTGATGGTCG
CGGCTCTTGCATTGGCGTCAGGACGAGAGATGGAGATGTTCTATCGGCTT
CACGGGTCGTAATTGCTGCCGGAGCGTTCACTCCCACCCTGTTGGAATGG
AGCGCTGCGAAGAGCGGCAACGGAGGTCTAAGAGCCGGTGATCGTATCTT
GGCCGCTGGTATCACGACAGGAATGGCACAGCTTGACAAGGAGCAGTATG
AACGGTTCAAGGATATGCCTGTTGGTTTCCAAGGCTATACACCGGAAGAG
G
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000881KJC3_000881Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000881-T1KJC3_000881-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000881-T1.cdsKJC3_000881-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000881-T1.utr3p1KJC3_000881-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000881-T1.exon4KJC3_000881-T1.exon4Aspergillus niger KJC3exon
KJC3_000881-T1.exon3KJC3_000881-T1.exon3Aspergillus niger KJC3exon
KJC3_000881-T1.exon2KJC3_000881-T1.exon2Aspergillus niger KJC3exon
KJC3_000881-T1.exon1KJC3_000881-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000881-T1.utr5p2KJC3_000881-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000881-T1.utr5p1KJC3_000881-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001478
DBxrefInterPro:IPR006076
DBxrefInterPro:IPR036188
DBxrefPFAM:PF01266
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2208219..2209911 -
Powered by Drupal