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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2252369..2254190+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000897-T1 ID=KJC3_000897-T1|Name=KJC3_000897-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1822bp|location=Sequence derived from alignment at ch1:2252369..2254190+ (Aspergillus niger KJC3)
CCACAAGTATAATCTGCACCTCCAAATACCTGCTCCGTTCCTGCCCTGCC
GGCGTCGTCATCATGACGTAGCCATCCGGCGGCCCGCGCTCCACACCAAC
CATACACTTCTACTCTACTAGTACTTACTTACTCTTACGCTTCATCCTCA
TTCTTTTCTTTTGTGTACATTCCTAATTCTTAATATACATAGCTGCTAAA
GCATCACTCCATCATGGCCTCCATATCCATCAACGCCCCCGGCGCAACCG
GCTTCATCTACAACAACGCCAACCTAGGCACCGCCCGCGTATGCATCTCC
GCCGAGACCCCCGACTTCGATACCGAGACGCTGCGCGCCTGGGCAGACGA
GGGCTTCGATGTCGTCTATGCGCCGTACAACAATGGGGGGAAGGAGTACG
AAGCACGGTTGAAGTCCGTGAAGGAGGGGTTGGGCGTGGGGGATAATTAT
GCTGTTATTGGTAAATACACCCATGGATTAGAAATGGGCGTTGGTTATAT
ACTAACATGATGGGTGGTAGCATTCGGTGACGCCGCTTCCTACTGCCTCG
ACTACTACCTCAAATCAACAAACTGCAGCCGTCTGGCCGCTCTCATTGCA
TACTACCCCACTACGATCCCCGATACGCGATCGCGATTCCCCTTTTCGGT
GCGCGTGTTGACGCATCTTGCTGGAGATACAGTGGACGTGGTGACCATCC
CTACGGTTATTGGATTGCAAGGGAAGAAACATCGCTCGACGAAGCAGATC
ACCCCCGGTATCGGGACGGGAGAGAGGCTGCAGATCGGGTGGCCGGCGTT
TACGTATGAGTCGGCGCAGCCGGGGTTTGCGGAGCATGATCTGGAGGAGT
TTGATCGGTTGGCGTCGGATTTGGCGTTTAGTCGTACGCTGCAGGTGCTG
AGGAAGGCGTTTGGCAAGGATTTGGATTTGGAGAATAGGTGGGAGGAACA
GCTTGAGGGTGAGCATACCTTTATACCATGTATATGTCGGGCATCAGATG
CTAATTATATCAGCGCGCTTCTTCTCCATGAACCTTACTGGTACAATGGA
GCCCTATGTCGGTCACCTCAACCCGACACTCACTTGTACACCAACCATGA
GCGGTGGTATCGGAACCCATACGCTGCGTCGCTTCTACGAGCAGAACTTC
CTGCGCAAGTTGCCTCCGTCTATGCGTCTGCGGTTGATTTCTCGGACTGT
TGGGGCGGATCGTATTGTTGATGAGCTATATGCGACGTTTGAACATACCC
AGGAGATACCCTGGATGCTACCTGGTGTTCCGCCGACGAATCGTCACGTG
GAAATAGTCCTAGTCAGCATTGTTAGTCTGCGCGGGGGAAGGCTGTACTC
AGAACACATGTACTGGGATCAAGCCAGTGTATTGGTGCAGGTCGGACTGC
TGGATCCGAAGTACATACCAGAGGGAGCACCACAGGGCGTAGACCGCTTG
CCAGTCATTGGACGCGAGGCAGCCAGACGCATCGTCGAGGAAGACCCTGA
GGCCGAGGGCCGTGATTATCACAATCGGTTGATCCGGCGGGCAAAGGCTA
AGCGGGGAAAGGATAAGCCGGTGGAGGAGTCGGGGACGGAGCTGGCGAAG
AGTGATACGGAGAAGGTGGAGAGTAAGCCAGCTGGGGAGAGTAAGGGGAA
GACGGTGCAGAGGGAGCAGAATGGTAATGGGGCGGATGCATTGGAGAATC
ATGGAATGGAGGAGAATGAGAAAGATGGGGAGAAGAAGAATGGCGAGGAT
GCGAATGGCGAGGAAAAGAAGCCAGTTAATCCGGCTGCTGCTACGGTGGA
GGACACGAAAAGCGATGAATGA back to topCoding sequence (CDS) from alignment at ch1:2252369..2254190+ >KJC3_000897-T1 ID=KJC3_000897-T1|Name=KJC3_000897-T1|organism=Aspergillus niger KJC3|type=CDS|length=4482bp|location=Sequence derived from alignment at ch1:2252369..2254190+ (Aspergillus niger KJC3)
ATGGCCTCCATATCCATCAACGCCCCCGGCGCAACCGGCTTCATCTACAA
CAACGCCAACCTAGGCACCGCCCGCGTATGCATCTCCGCCGAGACCCCCG
ACTTCGATACCGAGACGCTGCGCGCCTGGGCAGACGAGGGCTTCGATGTC
GTCTATGCGCCGTACAACAATGGGGGGAAGGAGTACGAAGCACGGTTGAA
GTCCGTGAAGGAGGGGTTGGGCGTGGGGGATAATTATGCTGTTATTGCAT
TCGGTGACGCCGCTTCCTACTGCCTCGACTACTACCTCAAATCAACAAAC
TGCAGCCGTCTGGCCGCTCTCATTGCATACTACCCCACTACGATCCCCGA
TACGCGATCGCGATTCCCCTTTTCGGTGCGCGTGTTGACGCATCTTGCTG
GAGATACAGTGGACGTGGTGACCATCCCTACGGTTATTGGATTGCAAGGG
AAGAAACATCGCTCGACGAAGCAGATCACCCCCGGTATCGGGACGGGAGA
GAGGCTGCAGATCGGGTGGCCGGCGTTTACGTATGAGTCGGCGCAGCCGG
GGTTTGCGGAGCATGATCTGGAGGAGTTTGATCGGTTGGCGTCGGATTTG
GCGTTTAGTCGTACGCTGCAGGTGCTGAGGAAGGCGTTTGGCAAGGATTT
GGATTTGGAGAATAGGTGGGAGGAACAGCTTGAGGCGCGCTTCTTCTCCA
TGAACCTTACTGGTACAATGGAGCCCTATGTCGGTCACCTCAACCCGACA
CTCACTTGTACACCAACCATGAGCGGTGGTATCGGAACCCATACGCTGCG
TCGCTTCTACGAGCAGAACTTCCTGCGCAAGTTGCCTCCGTCTATGCGTC
TGCGGTTGATTTCTCGGACTGTTGGGGCGGATCGTATTGTTGATGAGCTA
TATGCGACGTTTGAACATACCCAGGAGATACCCTGGATGCTACCTGGTGT
TCCGCCGACGAATCGTCACGTGGAAATAGTCCTAGTCAGCATTGTTAGTC
TGCGCGGGGGAAGGCTGTACTCAGAACACATGTACTGGGATCAAGCCAGT
GTATTGGTGCAGGTCGGACTGCTGGATCCGAAGTACATACCAGAGGGAGC
ACCACAGGGCGTAGACCGCTTGCCAGTCATTGGACGCGAGGCAGCCAGAC
GCATCGTCGAGGAAGACCCTGAGGCCGAGGGCCGTGATTATCACAATCGG
TTGATCCGGCGGGCAAAGGCTAAGCGGGGAAAGGATAAGCCGGTGGAGGA
GTCGGGGACGGAGCTGGCGAAGAGTGATACGGAGAAGGTGGAGAGTAAGC
CAGCTGGGGAGAGTAAGGGGAAGACGGTGCAGAGGGAGCAGAATGGTAAT
GGGGCGGATGCATTGGAGAATCATGGAATGGAGGAGAATGAGAAAGATGG
GGAGAAGAAGAATGGCGAGGATGCGAATGGCGAGGAAAAGAAGCCAGTTA
ATCCGGCTGCTGCTACGGTGGAGGACACGAAAAGCGATGAATGAATGGCC
TCCATATCCATCAACGCCCCCGGCGCAACCGGCTTCATCTACAACAACGC
CAACCTAGGCACCGCCCGCGTATGCATCTCCGCCGAGACCCCCGACTTCG
ATACCGAGACGCTGCGCGCCTGGGCAGACGAGGGCTTCGATGTCGTCTAT
GCGCCGTACAACAATGGGGGGAAGGAGTACGAAGCACGGTTGAAGTCCGT
GAAGGAGGGGTTGGGCGTGGGGGATAATTATGCTGTTATTGCATTCGGTG
ACGCCGCTTCCTACTGCCTCGACTACTACCTCAAATCAACAAACTGCAGC
CGTCTGGCCGCTCTCATTGCATACTACCCCACTACGATCCCCGATACGCG
ATCGCGATTCCCCTTTTCGGTGCGCGTGTTGACGCATCTTGCTGGAGATA
CAGTGGACGTGGTGACCATCCCTACGGTTATTGGATTGCAAGGGAAGAAA
CATCGCTCGACGAAGCAGATCACCCCCGGTATCGGGACGGGAGAGAGGCT
GCAGATCGGGTGGCCGGCGTTTACGTATGAGTCGGCGCAGCCGGGGTTTG
CGGAGCATGATCTGGAGGAGTTTGATCGGTTGGCGTCGGATTTGGCGTTT
AGTCGTACGCTGCAGGTGCTGAGGAAGGCGTTTGGCAAGGATTTGGATTT
GGAGAATAGGTGGGAGGAACAGCTTGAGGCGCGCTTCTTCTCCATGAACC
TTACTGGTACAATGGAGCCCTATGTCGGTCACCTCAACCCGACACTCACT
TGTACACCAACCATGAGCGGTGGTATCGGAACCCATACGCTGCGTCGCTT
CTACGAGCAGAACTTCCTGCGCAAGTTGCCTCCGTCTATGCGTCTGCGGT
TGATTTCTCGGACTGTTGGGGCGGATCGTATTGTTGATGAGCTATATGCG
ACGTTTGAACATACCCAGGAGATACCCTGGATGCTACCTGGTGTTCCGCC
GACGAATCGTCACGTGGAAATAGTCCTAGTCAGCATTGTTAGTCTGCGCG
GGGGAAGGCTGTACTCAGAACACATGTACTGGGATCAAGCCAGTGTATTG
GTGCAGGTCGGACTGCTGGATCCGAAGTACATACCAGAGGGAGCACCACA
GGGCGTAGACCGCTTGCCAGTCATTGGACGCGAGGCAGCCAGACGCATCG
TCGAGGAAGACCCTGAGGCCGAGGGCCGTGATTATCACAATCGGTTGATC
CGGCGGGCAAAGGCTAAGCGGGGAAAGGATAAGCCGGTGGAGGAGTCGGG
GACGGAGCTGGCGAAGAGTGATACGGAGAAGGTGGAGAGTAAGCCAGCTG
GGGAGAGTAAGGGGAAGACGGTGCAGAGGGAGCAGAATGGTAATGGGGCG
GATGCATTGGAGAATCATGGAATGGAGGAGAATGAGAAAGATGGGGAGAA
GAAGAATGGCGAGGATGCGAATGGCGAGGAAAAGAAGCCAGTTAATCCGG
CTGCTGCTACGGTGGAGGACACGAAAAGCGATGAATGAATGGCCTCCATA
TCCATCAACGCCCCCGGCGCAACCGGCTTCATCTACAACAACGCCAACCT
AGGCACCGCCCGCGTATGCATCTCCGCCGAGACCCCCGACTTCGATACCG
AGACGCTGCGCGCCTGGGCAGACGAGGGCTTCGATGTCGTCTATGCGCCG
TACAACAATGGGGGGAAGGAGTACGAAGCACGGTTGAAGTCCGTGAAGGA
GGGGTTGGGCGTGGGGGATAATTATGCTGTTATTGCATTCGGTGACGCCG
CTTCCTACTGCCTCGACTACTACCTCAAATCAACAAACTGCAGCCGTCTG
GCCGCTCTCATTGCATACTACCCCACTACGATCCCCGATACGCGATCGCG
ATTCCCCTTTTCGGTGCGCGTGTTGACGCATCTTGCTGGAGATACAGTGG
ACGTGGTGACCATCCCTACGGTTATTGGATTGCAAGGGAAGAAACATCGC
TCGACGAAGCAGATCACCCCCGGTATCGGGACGGGAGAGAGGCTGCAGAT
CGGGTGGCCGGCGTTTACGTATGAGTCGGCGCAGCCGGGGTTTGCGGAGC
ATGATCTGGAGGAGTTTGATCGGTTGGCGTCGGATTTGGCGTTTAGTCGT
ACGCTGCAGGTGCTGAGGAAGGCGTTTGGCAAGGATTTGGATTTGGAGAA
TAGGTGGGAGGAACAGCTTGAGGCGCGCTTCTTCTCCATGAACCTTACTG
GTACAATGGAGCCCTATGTCGGTCACCTCAACCCGACACTCACTTGTACA
CCAACCATGAGCGGTGGTATCGGAACCCATACGCTGCGTCGCTTCTACGA
GCAGAACTTCCTGCGCAAGTTGCCTCCGTCTATGCGTCTGCGGTTGATTT
CTCGGACTGTTGGGGCGGATCGTATTGTTGATGAGCTATATGCGACGTTT
GAACATACCCAGGAGATACCCTGGATGCTACCTGGTGTTCCGCCGACGAA
TCGTCACGTGGAAATAGTCCTAGTCAGCATTGTTAGTCTGCGCGGGGGAA
GGCTGTACTCAGAACACATGTACTGGGATCAAGCCAGTGTATTGGTGCAG
GTCGGACTGCTGGATCCGAAGTACATACCAGAGGGAGCACCACAGGGCGT
AGACCGCTTGCCAGTCATTGGACGCGAGGCAGCCAGACGCATCGTCGAGG
AAGACCCTGAGGCCGAGGGCCGTGATTATCACAATCGGTTGATCCGGCGG
GCAAAGGCTAAGCGGGGAAAGGATAAGCCGGTGGAGGAGTCGGGGACGGA
GCTGGCGAAGAGTGATACGGAGAAGGTGGAGAGTAAGCCAGCTGGGGAGA
GTAAGGGGAAGACGGTGCAGAGGGAGCAGAATGGTAATGGGGCGGATGCA
TTGGAGAATCATGGAATGGAGGAGAATGAGAAAGATGGGGAGAAGAAGAA
TGGCGAGGATGCGAATGGCGAGGAAAAGAAGCCAGTTAATCCGGCTGCTG
CTACGGTGGAGGACACGAAAAGCGATGAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000897-T1.utr5p1 | KJC3_000897-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR032710 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2252369..2254190 + |
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