|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2255977..2257931- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000899-T1 ID=KJC3_000899-T1|Name=KJC3_000899-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1955bp|location=Sequence derived from alignment at ch1:2255977..2257931- (Aspergillus niger KJC3)
TCCCATTAGCTTCAAATTACTCTATAGAAATACGTTACCGACCACCGGAC
CCGACGGCGCGCTATGCCGTCGCAATCATGGCGATCGACCAGCTCCTACG
TAGACCCTCGCTAGTTCCCAACCCAGCTTCCAGAGCACCTTTAAGTAGCA
ACAATTCCAAGAAATGCCCCCGTCCTACGCTCCCTTACAATCATCACCTT
AATTCTACACTTGCACATCATCCACAATGGCTACGACAATCACAGCAGAG
GACCTCCCTAACCTCCTCGCCAATGACATCAAAGTCAAAGTCGCCGGCGT
CGACTGCGACGGCATCCTTCGCGGCAAGGTCATGTCCAAGGAGAAGTTCC
TAGGCATTGCGCAAAAGGGATTCGGCTTCAGCTCCGCCGTGTTCGGGTGG
GACATGCAGGACGTGCTCTACACCACGGAGGCGAACATTGCGCCGGCCGA
CTCAGGATACGTGGATTTTCTGGCGGTGCCGGATCTGAACTCTTTCCGTC
GTATACCTTGGGAAGATGATATTCCTTTCTTCCTGGTAAGGTTCGTGCAG
AACGATAAGCCGGTTTCGGCCGATGGGAGGAGCATGTTGAGGTCGATTTG
CGATAAGTTGGCGGCGAATAATTGCAAGGGAATGGCGGGAGGTTGGTCAC
CCCCCCAAGATAGAGAAGATGTCATGGGTGCAAGTTTAGCTGACGTATGT
AGTGGAATTGGAGTTTATGAACTTCCAGACCCCCTCCGAAGACGGATACG
GCGCCAGTGGCTCCCAAACCCGCGATATCGCCGCCTTTCTCGATAAGAAT
GCCCCCGGTGCGCTGCGCCCCTTGACTGCAGGCAGCTTCTCCTACAGCGC
GACGCGACCCGTGGCATACAAGAAATATTTCTATGATATCTTCGATACCA
GCGCGCGGTTCAACTGCGGCATTGAGGGATGGCACACTGAGGGTGGACCG
GGAGTCTATGAAGCGGTGAGTTGGCTTCAATTGAGTGCGCGGACCGCGCT
GAGCTAACCAAATCAGGCATTGAAAGTATGCGATGTCAGCGACATGGCCG
ACAAGGTGTCTCTGTTCAAGTATGTCCACTACATATCTATTAGTTCTGTG
TAGACAAGCTAACGAACAGACTCCTCGCAAAATCCATCGGCGTCGAACAC
GGCATCACGCCCTGCTTCATGGCCAAGCCCATGCAAGGCCAACCCGGCAG
CTCGGGCCACATCCACGTCTCCCTCACCGATCTAGAGGGCAAGAACCTCT
TCGCGCGCGACACTCCCGATCCCAATGCCCCCTGGTCCGACGCAGCCGGG
TTGTCCGACCTGGGCCGACACTTCCTCGCAGGCGTGCTGGAAGCGCTTCC
GGACATCATGCCGCTATTCGCGCCCACCATTAACTCGTACAAGCGGCTGG
TGGAGAACTTCTGGGCGCCGGTGAATATCAGCTGGGGGTTGGAGGACCGC
ATGGCCTCGGTAAGAATTATCACGCCGCCGGTGTGCAAGCCGGGAGCGAC
GCGATTCGAGGTGCGGATCCCTGGCGCGGATTTGCACCCGCATTATGCCC
TTAGTGTGATTCTGGCGGCGGGATGGAGGGGCGTGGAGAAGAAGTTGGAT
ATTAAGGTGCCGCCAGTGAATGTGCAGAAGGCGGAGAAGATCAAGGCGGA
GTTGCTGCCGAATACATTGGAGGAGGCCCTGAAGAGGTTTAGTGACAAGG
GGAGTGTTGCGAGGGAGATTCTGGATCCGGAGTTTGTGGACTTTTTCACG
GCAACGAGAGAGCATGAGTTGAGGGTATGGAGAGAGGCGGTTACGGATTG
GTAAGTCCTTTGTTTCCACCCTTCTATTGCCTGATTGCTGACTGCGTTAT
AGGGAGTTTAAGCGTTATATCGAGACTGTATAGATACCTTTGTATAGATC
AAGTTCATTAGTTATTTACCAATTGACTTTTCCAAGTAGCAGCTGTAGTG
AGCGG back to topCoding sequence (CDS) from alignment at ch1:2255977..2257931- >KJC3_000899-T1 ID=KJC3_000899-T1|Name=KJC3_000899-T1|organism=Aspergillus niger KJC3|type=CDS|length=5664bp|location=Sequence derived from alignment at ch1:2255977..2257931- (Aspergillus niger KJC3)
ACTCCTCGCAAAATCCATCGGCGTCGAACACGGCATCACGCCCTGCTTCA
TGGCCAAGCCCATGCAAGGCCAACCCGGCAGCTCGGGCCACATCCACGTC
TCCCTCACCGATCTAGAGGGCAAGAACCTCTTCGCGCGCGACACTCCCGA
TCCCAATGCCCCCTGGTCCGACGCAGCCGGGTTGTCCGACCTGGGCCGAC
ACTTCCTCGCAGGCGTGCTGGAAGCGCTTCCGGACATCATGCCGCTATTC
GCGCCCACCATTAACTCGTACAAGCGGCTGGTGGAGAACTTCTGGGCGCC
GGTGAATATCAGCTGGGGGTTGGAGGACCGCATGGCCTCGGTAAGAATTA
TCACGCCGCCGGTGTGCAAGCCGGGAGCGACGCGATTCGAGGTGCGGATC
CCTGGCGCGGATTTGCACCCGCATTATGCCCTTAGTGTGATTCTGGCGGC
GGGATGGAGGGGCGTGGAGAAGAAGTTGGATATTAAGGTGCCGCCAGTGA
ATGTGCAGAAGGCGGAGAAGATCAAGGCGGAGTTGCTGCCGAATACATTG
GAGGAGGCCCTGAAGAGGTTTAGTGACAAGGGGAGTGTTGCGAGGGAGAT
TCTGGATCCGGAGTTTGTGGACTTTTTCACGGCAACGAGAGAGCATGAGT
TGAGGGTATGGAGAGAGGCGGTTACGGATTGGTAAGCATTGAAAGTATGC
GATGTCAGCGACATGGCCGACAAGGTGTCTCTGTTCAATGGAATTGGAGT
TTATGAACTTCCAGACCCCCTCCGAAGACGGATACGGCGCCAGTGGCTCC
CAAACCCGCGATATCGCCGCCTTTCTCGATAAGAATGCCCCCGGTGCGCT
GCGCCCCTTGACTGCAGGCAGCTTCTCCTACAGCGCGACGCGACCCGTGG
CATACAAGAAATATTTCTATGATATCTTCGATACCAGCGCGCGGTTCAAC
TGCGGCATTGAGGGATGGCACACTGAGGGTGGACCGGGAGTCTATGAAGC
GATGGCTACGACAATCACAGCAGAGGACCTCCCTAACCTCCTCGCCAATG
ACATCAAAGTCAAAGTCGCCGGCGTCGACTGCGACGGCATCCTTCGCGGC
AAGGTCATGTCCAAGGAGAAGTTCCTAGGCATTGCGCAAAAGGGATTCGG
CTTCAGCTCCGCCGTGTTCGGGTGGGACATGCAGGACGTGCTCTACACCA
CGGAGGCGAACATTGCGCCGGCCGACTCAGGATACGTGGATTTTCTGGCG
GTGCCGGATCTGAACTCTTTCCGTCGTATACCTTGGGAAGATGATATTCC
TTTCTTCCTGGTAAGGTTCGTGCAGAACGATAAGCCGGTTTCGGCCGATG
GGAGGAGCATGTTGAGGTCGATTTGCGATAAGTTGGCGGCGAATAATTGC
AAGGGAATGGCGGGAGACTCCTCGCAAAATCCATCGGCGTCGAACACGGC
ATCACGCCCTGCTTCATGGCCAAGCCCATGCAAGGCCAACCCGGCAGCTC
GGGCCACATCCACGTCTCCCTCACCGATCTAGAGGGCAAGAACCTCTTCG
CGCGCGACACTCCCGATCCCAATGCCCCCTGGTCCGACGCAGCCGGGTTG
TCCGACCTGGGCCGACACTTCCTCGCAGGCGTGCTGGAAGCGCTTCCGGA
CATCATGCCGCTATTCGCGCCCACCATTAACTCGTACAAGCGGCTGGTGG
AGAACTTCTGGGCGCCGGTGAATATCAGCTGGGGGTTGGAGGACCGCATG
GCCTCGGTAAGAATTATCACGCCGCCGGTGTGCAAGCCGGGAGCGACGCG
ATTCGAGGTGCGGATCCCTGGCGCGGATTTGCACCCGCATTATGCCCTTA
GTGTGATTCTGGCGGCGGGATGGAGGGGCGTGGAGAAGAAGTTGGATATT
AAGGTGCCGCCAGTGAATGTGCAGAAGGCGGAGAAGATCAAGGCGGAGTT
GCTGCCGAATACATTGGAGGAGGCCCTGAAGAGGTTTAGTGACAAGGGGA
GTGTTGCGAGGGAGATTCTGGATCCGGAGTTTGTGGACTTTTTCACGGCA
ACGAGAGAGCATGAGTTGAGGGTATGGAGAGAGGCGGTTACGGATTGGTA
AGCATTGAAAGTATGCGATGTCAGCGACATGGCCGACAAGGTGTCTCTGT
TCAATGGAATTGGAGTTTATGAACTTCCAGACCCCCTCCGAAGACGGATA
CGGCGCCAGTGGCTCCCAAACCCGCGATATCGCCGCCTTTCTCGATAAGA
ATGCCCCCGGTGCGCTGCGCCCCTTGACTGCAGGCAGCTTCTCCTACAGC
GCGACGCGACCCGTGGCATACAAGAAATATTTCTATGATATCTTCGATAC
CAGCGCGCGGTTCAACTGCGGCATTGAGGGATGGCACACTGAGGGTGGAC
CGGGAGTCTATGAAGCGATGGCTACGACAATCACAGCAGAGGACCTCCCT
AACCTCCTCGCCAATGACATCAAAGTCAAAGTCGCCGGCGTCGACTGCGA
CGGCATCCTTCGCGGCAAGGTCATGTCCAAGGAGAAGTTCCTAGGCATTG
CGCAAAAGGGATTCGGCTTCAGCTCCGCCGTGTTCGGGTGGGACATGCAG
GACGTGCTCTACACCACGGAGGCGAACATTGCGCCGGCCGACTCAGGATA
CGTGGATTTTCTGGCGGTGCCGGATCTGAACTCTTTCCGTCGTATACCTT
GGGAAGATGATATTCCTTTCTTCCTGGTAAGGTTCGTGCAGAACGATAAG
CCGGTTTCGGCCGATGGGAGGAGCATGTTGAGGTCGATTTGCGATAAGTT
GGCGGCGAATAATTGCAAGGGAATGGCGGGAGACTCCTCGCAAAATCCAT
CGGCGTCGAACACGGCATCACGCCCTGCTTCATGGCCAAGCCCATGCAAG
GCCAACCCGGCAGCTCGGGCCACATCCACGTCTCCCTCACCGATCTAGAG
GGCAAGAACCTCTTCGCGCGCGACACTCCCGATCCCAATGCCCCCTGGTC
CGACGCAGCCGGGTTGTCCGACCTGGGCCGACACTTCCTCGCAGGCGTGC
TGGAAGCGCTTCCGGACATCATGCCGCTATTCGCGCCCACCATTAACTCG
TACAAGCGGCTGGTGGAGAACTTCTGGGCGCCGGTGAATATCAGCTGGGG
GTTGGAGGACCGCATGGCCTCGGTAAGAATTATCACGCCGCCGGTGTGCA
AGCCGGGAGCGACGCGATTCGAGGTGCGGATCCCTGGCGCGGATTTGCAC
CCGCATTATGCCCTTAGTGTGATTCTGGCGGCGGGATGGAGGGGCGTGGA
GAAGAAGTTGGATATTAAGGTGCCGCCAGTGAATGTGCAGAAGGCGGAGA
AGATCAAGGCGGAGTTGCTGCCGAATACATTGGAGGAGGCCCTGAAGAGG
TTTAGTGACAAGGGGAGTGTTGCGAGGGAGATTCTGGATCCGGAGTTTGT
GGACTTTTTCACGGCAACGAGAGAGCATGAGTTGAGGGTATGGAGAGAGG
CGGTTACGGATTGGTAAGCATTGAAAGTATGCGATGTCAGCGACATGGCC
GACAAGGTGTCTCTGTTCAATGGAATTGGAGTTTATGAACTTCCAGACCC
CCTCCGAAGACGGATACGGCGCCAGTGGCTCCCAAACCCGCGATATCGCC
GCCTTTCTCGATAAGAATGCCCCCGGTGCGCTGCGCCCCTTGACTGCAGG
CAGCTTCTCCTACAGCGCGACGCGACCCGTGGCATACAAGAAATATTTCT
ATGATATCTTCGATACCAGCGCGCGGTTCAACTGCGGCATTGAGGGATGG
CACACTGAGGGTGGACCGGGAGTCTATGAAGCGATGGCTACGACAATCAC
AGCAGAGGACCTCCCTAACCTCCTCGCCAATGACATCAAAGTCAAAGTCG
CCGGCGTCGACTGCGACGGCATCCTTCGCGGCAAGGTCATGTCCAAGGAG
AAGTTCCTAGGCATTGCGCAAAAGGGATTCGGCTTCAGCTCCGCCGTGTT
CGGGTGGGACATGCAGGACGTGCTCTACACCACGGAGGCGAACATTGCGC
CGGCCGACTCAGGATACGTGGATTTTCTGGCGGTGCCGGATCTGAACTCT
TTCCGTCGTATACCTTGGGAAGATGATATTCCTTTCTTCCTGGTAAGGTT
CGTGCAGAACGATAAGCCGGTTTCGGCCGATGGGAGGAGCATGTTGAGGT
CGATTTGCGATAAGTTGGCGGCGAATAATTGCAAGGGAATGGCGGGAGAC
TCCTCGCAAAATCCATCGGCGTCGAACACGGCATCACGCCCTGCTTCATG
GCCAAGCCCATGCAAGGCCAACCCGGCAGCTCGGGCCACATCCACGTCTC
CCTCACCGATCTAGAGGGCAAGAACCTCTTCGCGCGCGACACTCCCGATC
CCAATGCCCCCTGGTCCGACGCAGCCGGGTTGTCCGACCTGGGCCGACAC
TTCCTCGCAGGCGTGCTGGAAGCGCTTCCGGACATCATGCCGCTATTCGC
GCCCACCATTAACTCGTACAAGCGGCTGGTGGAGAACTTCTGGGCGCCGG
TGAATATCAGCTGGGGGTTGGAGGACCGCATGGCCTCGGTAAGAATTATC
ACGCCGCCGGTGTGCAAGCCGGGAGCGACGCGATTCGAGGTGCGGATCCC
TGGCGCGGATTTGCACCCGCATTATGCCCTTAGTGTGATTCTGGCGGCGG
GATGGAGGGGCGTGGAGAAGAAGTTGGATATTAAGGTGCCGCCAGTGAAT
GTGCAGAAGGCGGAGAAGATCAAGGCGGAGTTGCTGCCGAATACATTGGA
GGAGGCCCTGAAGAGGTTTAGTGACAAGGGGAGTGTTGCGAGGGAGATTC
TGGATCCGGAGTTTGTGGACTTTTTCACGGCAACGAGAGAGCATGAGTTG
AGGGTATGGAGAGAGGCGGTTACGGATTGGTAAGCATTGAAAGTATGCGA
TGTCAGCGACATGGCCGACAAGGTGTCTCTGTTCAATGGAATTGGAGTTT
ATGAACTTCCAGACCCCCTCCGAAGACGGATACGGCGCCAGTGGCTCCCA
AACCCGCGATATCGCCGCCTTTCTCGATAAGAATGCCCCCGGTGCGCTGC
GCCCCTTGACTGCAGGCAGCTTCTCCTACAGCGCGACGCGACCCGTGGCA
TACAAGAAATATTTCTATGATATCTTCGATACCAGCGCGCGGTTCAACTG
CGGCATTGAGGGATGGCACACTGAGGGTGGACCGGGAGTCTATGAAGCGA
TGGCTACGACAATCACAGCAGAGGACCTCCCTAACCTCCTCGCCAATGAC
ATCAAAGTCAAAGTCGCCGGCGTCGACTGCGACGGCATCCTTCGCGGCAA
GGTCATGTCCAAGGAGAAGTTCCTAGGCATTGCGCAAAAGGGATTCGGCT
TCAGCTCCGCCGTGTTCGGGTGGGACATGCAGGACGTGCTCTACACCACG
GAGGCGAACATTGCGCCGGCCGACTCAGGATACGTGGATTTTCTGGCGGT
GCCGGATCTGAACTCTTTCCGTCGTATACCTTGGGAAGATGATATTCCTT
TCTTCCTGGTAAGGTTCGTGCAGAACGATAAGCCGGTTTCGGCCGATGGG
AGGAGCATGTTGAGGTCGATTTGCGATAAGTTGGCGGCGAATAATTGCAA
GGGAATGGCGGGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004356 | glutamate-ammonia ligase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006807 | nitrogen compound metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000899-T1.utr3p1 | KJC3_000899-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000899-T1.utr5p1 | KJC3_000899-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR014746 |
| DBxref | InterPro:IPR008146 |
| DBxref | PFAM:PF00120 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2255977..2257931 - |
|
