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KJC3_000902-T1, KJC3_000902-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000902-T1
Unique NameKJC3_000902-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2261605..2263021+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000902-T1 ID=KJC3_000902-T1|Name=KJC3_000902-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1417bp|location=Sequence derived from alignment at ch1:2261605..2263021+ (Aspergillus niger KJC3)
CGGATAGATAGTCAGATAGTCAGCCAAGCAGTGAGTGGAGCGGTCCCAGC
TCATCTGCTGTTAGTAACAGCGGTGAAAGTAATGAGCTGGACTGATGTTT
GCCGAGGAAGGAGGGGTAGCTACGTATCATGGAACTAGCTAGCTTATTTC
ATTAGGTAAACTGGTTATGCAGCAAGGGGTGAGTTGGTGGTCTGCTGTGG
TACTTAAAACCGTGGCCGGTTCGCTCTCTGGATTATCGGTTCAATTATTC
TACCCTTCACTTTATTGTAAAGACACATACATACACACAATTGTCTCAGA
ATCTAGCACAATGGTTGGACGACTTGCTGGAAAGAACGCTCTCGTTACTG
GTGCTGCGGGGTATTTCTCTCTCTTTCCTCTTTCTCTTTCTCCTTCTGTG
TCTGAATGGTTGCAATTGGGGTGGATATGTACAAAAGGAAGCAAGAAGCT
GACAATACTATTTCCACATGCAGTGGCATCGGTCTCGAAACCACCATCCT
CATGCTCCGCGAAGGCGCCTCCGTCCTGATGACCGATATCAGTGGCCCCG
GGCTCGAAAAGGCCTTGAACAAAGTGAACGAGGTCGTGCCCGAACGCTCC
GGTAAAGTGGAGACCCGCGTGGTCGATGTCTCCAAGGAAGCCGAGGTGGA
AGCTGCCGTGGCGCATCTGGATGCCTGGGGTGGATTGGATGTGATTTTCA
ACAACGCGGGCATCATGCATGCCAAGGATGGCGACTCGGAGGAGACTCCC
GAGGCTATCTGGGACTTGACCATGAACATCAACGTCAAGGGCGTGTGGTA
TGGATGCAAGCATGCGGTGAAGAGTCTGAGGAAGCATGGCAAGAAGAAGG
GAAGTGTTATCAACACGGCCAGTATGGTCGCTTTGGTCGGTGCTGCTACG
CCCCAGCTGGCGTATACCGCTAGTAAGGGGGCTGTGTTGGCTTTGACTCG
CGAGTTGGCGATTGTGCATGCCAGGGAGGGTGAGTTTGCTGCTACTGCTG
CCCTATTGTATTTGGTCTGGTGCTGATGATGATGATGCAGGCTTCCGGTT
CAACTCGTTGTGTCCCGCTCCGCTTAAGTGAGTATATCCTCTCCGTGCAT
GCTGAGGACGAAGCTAATGAATACAGCACTCCCCTTCTGCAGGACTGGCT
CGGTGATGACAAGGAGAAGCGCTTCCGTCGCGAGGTCCACTTCCCGACCG
GTCGCTTCGGAGAGGCCATCGAACAGGCCCACGCTGTCGTCTTCCTGGCT
AGCGATGAGAGCAGCTTCGTCAATGCCACTGATTTCGTCGTCGACGGTGG
TCTGACCAAGGCGTATGTGACTCCTGAGGGTCCTGCCACCGAGGCCCCTA
AGAACCTGGGTCAATAAGCGGCGACCCATGTCTGGTCAGGATGCTATGAG
TGATGATTGTATGATAG
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Coding sequence (CDS) from alignment at ch1:2261605..2263021+

>KJC3_000902-T1 ID=KJC3_000902-T1|Name=KJC3_000902-T1|organism=Aspergillus niger KJC3|type=CDS|length=3912bp|location=Sequence derived from alignment at ch1:2261605..2263021+ (Aspergillus niger KJC3)
ATGCAGCAAGGGGTGAGTTGGTGGTCTGCTGTGGTACTTAAAACCGTGGC
CGGTTCGCTCTCTGGATTATCGGTTCAATTATTCTACCCTTCACTTTATT
GTAAAGACACATACATACACACAATTGTCTCAGAATCTAGCACAATGGTT
GGACGACTTGCTGGAAAGAACGCTCTCGTTACTGGTGCTGCGGGTGGCAT
CGGTCTCGAAACCACCATCCTCATGCTCCGCGAAGGCGCCTCCGTCCTGA
TGACCGATATCAGTGGCCCCGGGCTCGAAAAGGCCTTGAACAAAGTGAAC
GAGGTCGTGCCCGAACGCTCCGGTAAAGTGGAGACCCGCGTGGTCGATGT
CTCCAAGGAAGCCGAGGTGGAAGCTGCCGTGGCGCATCTGGATGCCTGGG
GTGGATTGGATGTGATTTTCAACAACGCGGGCATCATGCATGCCAAGGAT
GGCGACTCGGAGGAGACTCCCGAGGCTATCTGGGACTTGACCATGAACAT
CAACGTCAAGGGCGTGTGGTATGGATGCAAGCATGCGGTGAAGAGTCTGA
GGAAGCATGGCAAGAAGAAGGGAAGTGTTATCAACACGGCCAGTATGGTC
GCTTTGGTCGGTGCTGCTACGCCCCAGCTGGCGTATACCGCTAGTAAGGG
GGCTGTGTTGGCTTTGACTCGCGAGTTGGCGATTGTGCATGCCAGGGAGG
GCTTCCGGTTCAACTCGTTGTGTCCCGCTCCGCTTAACACTCCCCTTCTG
CAGGACTGGCTCGGTGATGACAAGGAGAAGCGCTTCCGTCGCGAGGTCCA
CTTCCCGACCGGTCGCTTCGGAGAGGCCATCGAACAGGCCCACGCTGTCG
TCTTCCTGGCTAGCGATGAGAGCAGCTTCGTCAATGCCACTGATTTCGTC
GTCGACGGTGGTCTGACCAAGGCGTATGTGACTCCTGAGGGTCCTGCCAC
CGAGGCCCCTAAGAACCTGGGTCAATAAATGCAGCAAGGGGTGAGTTGGT
GGTCTGCTGTGGTACTTAAAACCGTGGCCGGTTCGCTCTCTGGATTATCG
GTTCAATTATTCTACCCTTCACTTTATTGTAAAGACACATACATACACAC
AATTGTCTCAGAATCTAGCACAATGGTTGGACGACTTGCTGGAAAGAACG
CTCTCGTTACTGGTGCTGCGGGTGGCATCGGTCTCGAAACCACCATCCTC
ATGCTCCGCGAAGGCGCCTCCGTCCTGATGACCGATATCAGTGGCCCCGG
GCTCGAAAAGGCCTTGAACAAAGTGAACGAGGTCGTGCCCGAACGCTCCG
GTAAAGTGGAGACCCGCGTGGTCGATGTCTCCAAGGAAGCCGAGGTGGAA
GCTGCCGTGGCGCATCTGGATGCCTGGGGTGGATTGGATGTGATTTTCAA
CAACGCGGGCATCATGCATGCCAAGGATGGCGACTCGGAGGAGACTCCCG
AGGCTATCTGGGACTTGACCATGAACATCAACGTCAAGGGCGTGTGGTAT
GGATGCAAGCATGCGGTGAAGAGTCTGAGGAAGCATGGCAAGAAGAAGGG
AAGTGTTATCAACACGGCCAGTATGGTCGCTTTGGTCGGTGCTGCTACGC
CCCAGCTGGCGTATACCGCTAGTAAGGGGGCTGTGTTGGCTTTGACTCGC
GAGTTGGCGATTGTGCATGCCAGGGAGGGCTTCCGGTTCAACTCGTTGTG
TCCCGCTCCGCTTAACACTCCCCTTCTGCAGGACTGGCTCGGTGATGACA
AGGAGAAGCGCTTCCGTCGCGAGGTCCACTTCCCGACCGGTCGCTTCGGA
GAGGCCATCGAACAGGCCCACGCTGTCGTCTTCCTGGCTAGCGATGAGAG
CAGCTTCGTCAATGCCACTGATTTCGTCGTCGACGGTGGTCTGACCAAGG
CGTATGTGACTCCTGAGGGTCCTGCCACCGAGGCCCCTAAGAACCTGGGT
CAATAAATGCAGCAAGGGGTGAGTTGGTGGTCTGCTGTGGTACTTAAAAC
CGTGGCCGGTTCGCTCTCTGGATTATCGGTTCAATTATTCTACCCTTCAC
TTTATTGTAAAGACACATACATACACACAATTGTCTCAGAATCTAGCACA
ATGGTTGGACGACTTGCTGGAAAGAACGCTCTCGTTACTGGTGCTGCGGG
TGGCATCGGTCTCGAAACCACCATCCTCATGCTCCGCGAAGGCGCCTCCG
TCCTGATGACCGATATCAGTGGCCCCGGGCTCGAAAAGGCCTTGAACAAA
GTGAACGAGGTCGTGCCCGAACGCTCCGGTAAAGTGGAGACCCGCGTGGT
CGATGTCTCCAAGGAAGCCGAGGTGGAAGCTGCCGTGGCGCATCTGGATG
CCTGGGGTGGATTGGATGTGATTTTCAACAACGCGGGCATCATGCATGCC
AAGGATGGCGACTCGGAGGAGACTCCCGAGGCTATCTGGGACTTGACCAT
GAACATCAACGTCAAGGGCGTGTGGTATGGATGCAAGCATGCGGTGAAGA
GTCTGAGGAAGCATGGCAAGAAGAAGGGAAGTGTTATCAACACGGCCAGT
ATGGTCGCTTTGGTCGGTGCTGCTACGCCCCAGCTGGCGTATACCGCTAG
TAAGGGGGCTGTGTTGGCTTTGACTCGCGAGTTGGCGATTGTGCATGCCA
GGGAGGGCTTCCGGTTCAACTCGTTGTGTCCCGCTCCGCTTAACACTCCC
CTTCTGCAGGACTGGCTCGGTGATGACAAGGAGAAGCGCTTCCGTCGCGA
GGTCCACTTCCCGACCGGTCGCTTCGGAGAGGCCATCGAACAGGCCCACG
CTGTCGTCTTCCTGGCTAGCGATGAGAGCAGCTTCGTCAATGCCACTGAT
TTCGTCGTCGACGGTGGTCTGACCAAGGCGTATGTGACTCCTGAGGGTCC
TGCCACCGAGGCCCCTAAGAACCTGGGTCAATAAATGCAGCAAGGGGTGA
GTTGGTGGTCTGCTGTGGTACTTAAAACCGTGGCCGGTTCGCTCTCTGGA
TTATCGGTTCAATTATTCTACCCTTCACTTTATTGTAAAGACACATACAT
ACACACAATTGTCTCAGAATCTAGCACAATGGTTGGACGACTTGCTGGAA
AGAACGCTCTCGTTACTGGTGCTGCGGGTGGCATCGGTCTCGAAACCACC
ATCCTCATGCTCCGCGAAGGCGCCTCCGTCCTGATGACCGATATCAGTGG
CCCCGGGCTCGAAAAGGCCTTGAACAAAGTGAACGAGGTCGTGCCCGAAC
GCTCCGGTAAAGTGGAGACCCGCGTGGTCGATGTCTCCAAGGAAGCCGAG
GTGGAAGCTGCCGTGGCGCATCTGGATGCCTGGGGTGGATTGGATGTGAT
TTTCAACAACGCGGGCATCATGCATGCCAAGGATGGCGACTCGGAGGAGA
CTCCCGAGGCTATCTGGGACTTGACCATGAACATCAACGTCAAGGGCGTG
TGGTATGGATGCAAGCATGCGGTGAAGAGTCTGAGGAAGCATGGCAAGAA
GAAGGGAAGTGTTATCAACACGGCCAGTATGGTCGCTTTGGTCGGTGCTG
CTACGCCCCAGCTGGCGTATACCGCTAGTAAGGGGGCTGTGTTGGCTTTG
ACTCGCGAGTTGGCGATTGTGCATGCCAGGGAGGGCTTCCGGTTCAACTC
GTTGTGTCCCGCTCCGCTTAACACTCCCCTTCTGCAGGACTGGCTCGGTG
ATGACAAGGAGAAGCGCTTCCGTCGCGAGGTCCACTTCCCGACCGGTCGC
TTCGGAGAGGCCATCGAACAGGCCCACGCTGTCGTCTTCCTGGCTAGCGA
TGAGAGCAGCTTCGTCAATGCCACTGATTTCGTCGTCGACGGTGGTCTGA
CCAAGGCGTATGTGACTCCTGAGGGTCCTGCCACCGAGGCCCCTAAGAAC
CTGGGTCAATAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000902KJC3_000902Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000902-T1KJC3_000902-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000902-T1.utr5p1KJC3_000902-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000902-T1.exon1KJC3_000902-T1.exon1Aspergillus niger KJC3exon
KJC3_000902-T1.exon2KJC3_000902-T1.exon2Aspergillus niger KJC3exon
KJC3_000902-T1.exon3KJC3_000902-T1.exon3Aspergillus niger KJC3exon
KJC3_000902-T1.exon4KJC3_000902-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000902-T1.cdsKJC3_000902-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000902-T1.utr3p1KJC3_000902-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2261605..2263021 +
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