KJC3_000903-T1, KJC3_000903-T1 (mRNA) Aspergillus niger KJC3

Overview


Name	KJC3_000903-T1
Unique Name	KJC3_000903-T1
Type	mRNA
Organism	Aspergillus niger KJC3

Sequences

The following sequences are available for this feature:

mRNA from alignment at ch1:2261537..2264763-
coding sequence from alignment at ch1:2261537..2264763-

mRNA from alignment at ch1:2261537..2264763-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>KJC3_000903-T1 ID=KJC3_000903-T1|Name=KJC3_000903-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3227bp|location=Sequence derived from alignment at ch1:2261537..2264763- (Aspergillus niger KJC3)
CTCCAATCTCCCAATCCTCTAGCGCTAAGCCTCCCTATTTCACACCAATG
CCGCCTAGTAGACGGCCGCGTACCGACCCCATCGTCCGCGTCCGCACCGG
TTGCTGGGCCTGCAGACGCCGCAAGAAGAAATGTGATGAAGCCAAACCAG
TCTGTGGGGGATGCGTGCGAAATAAGCTCACTTGCCAGTGGCCGACCATC
ATCCCGGGCCAACCCAAGGCCAACAATATCTCCTTCATGCCTGAAGATGA
TGATCAGCAAAATCGTCCAGGTGGCGAAGAGGGCCCCTCTCGCCAGATGA
GCGTGAACCGGGAAACGTCCAGCTCGATCGAGTCCCGTTCTACATCCCCT
TCTTCCCCAGAGGAGATACTACGGGAGTCGGAATCTCCAGAAGACACGTC
TCGCGCGTCTTCTGCACCATGTCCCTCGATTTCGATGGATCTTGCTCAGA
TTCCTGCCATCGGCAGCAGTCAAGTCCTAGGAACGTCTGCCACCGTTAGC
AATCTACTCCCCCGGAGCTTGTCCATGTTCCCAGGCCATGGGCCTGACTC
TTATGAGCTGTTGAGCCACTATTTGGCAACAACAGCCGACTGCATGGCGA
ACGGGTCTACCCCTATCAATCCATTCTTGGTTCAAATCGTGCCACTCGCT
TTCAGCAGCGATCTTCTGCTTCAGCTGGTTCTGACGCAGAGTGCTGCTCA
CCGGGCGTTTCGCTGTCACATGGAGTCTGACGAGGTCGCTCAGAGACACT
ACACGTCAGCCCTACAACTATTCCGAAAAGGAGTCACCGAATTTATTGAC
GGGAAAGAGTCAAATCCGCTCATGCTTACGGTAGGAGCGTTGGTGATGTG
CTTTACTGAGGTACGCCTACATTCCAAGGACATTGAACATGGCTGATTAT
AGCAGACGGCCAAAGGCGATATGAACGGCACGATATTCGACCACCTGACT
GCTGCTAATTCTCTTTTGATTCGACTGCTCTCACAAAGCGATACAGCGGT
ACCGAAAGACTTGAAAGACTTTGTTATCGAATACTACACCTACACTGCTG
CCGTGAGCATGATCTCGGTCGATGCTCGTGTCAGTACTCAACTATTCTTG
AACTTTGACCTCGAACAACGGGCGCGTCAGCTGCTGCAATCGGAATACGT
GGGTAATCTATGTGGTTGCTGGCTGGAGTTGTTGCTGCTGATCCCCTGCA
TCTTCGACTTAGGTCGGCAGTGGATGATGCACGATGGCCGACCGGCCATG
CCCACTGCAGATGATATTGCCATGTTCAGCTCGCTGCAAGTGCAAATCAT
GCGATGGACACCGTATGCCTCAGTCAGCCCGGAGGTATTTCTGGCAGGGC
GGATCTTTCAGCAGGCGATGCTCCTTTACCTCTACACCGCGCTAGGCGGG
TTCTCGCGGGCGGAGAACGGCATGTATCAGGGGCTGATCGAGACTGCGAT
TGCAGAGGCAATGTCTTATCTGGATCAGCTGTCTGGGACTGCGCGGATCA
ACTCGGGTCTCTGTTGGCCGATTGCTGTGGTGGGGTCTTGCTTATCCAAT
GCGGAACACCAGGATAGTCTACGCCGCCGGCTCACCGTCATGGTGAACAC
GTTTGGACTCGGCAACATGCAGAGGACTCTACTCATACTGGAACACATGT
GGCAGATGCCGCTGGACGAAGCAGGTCCATGGAACATCTGTCGAGCCATG
CAACGGAATCAAATATGGATATCGTTTGCCTAATCAACCAGTCTATCATA
CAATCATCACTCATAGCATCCTGACCAGACATGGGTCGCCGCTTATTGAC
CCAGGTTCTTAGGGGCCTCGGTGGCAGGACCCTCAGGAGTCACATACGCC
TTGGTCAGACCACCGTCGACGACGAAATCAGTGGCATTGACGAAGCTGCT
CTCATCGCTAGCCAGGAAGACGACAGCGTGGGCCTGTTCGATGGCCTCTC
CGAAGCGACCGGTCGGGAAGTGGACCTCGCGACGGAAGCGCTTCTCCTTG
TCATCACCGAGCCAGTCCTGCAGAAGGGGAGTGCTGTATTCATTAGCTTC
GTCCTCAGCATGCACGGAGAGGATATACTCACTTAAGCGGAGCGGGACAC
AACGAGTTGAACCGGAAGCCTGCATCATCATCATCAGCACCAGACCAAAT
ACAATAGGGCAGCAGTAGCAGCAAACTCACCCTCCCTGGCATGCACAATC
GCCAACTCGCGAGTCAAAGCCAACACAGCCCCCTTACTAGCGGTATACGC
CAGCTGGGGCGTAGCAGCACCGACCAAAGCGACCATACTGGCCGTGTTGA
TAACACTTCCCTTCTTCTTGCCATGCTTCCTCAGACTCTTCACCGCATGC
TTGCATCCATACCACACGCCCTTGACGTTGATGTTCATGGTCAAGTCCCA
GATAGCCTCGGGAGTCTCCTCCGAGTCGCCATCCTTGGCATGCATGATGC
CCGCGTTGTTGAAAATCACATCCAATCCACCCCAGGCATCCAGATGCGCC
ACGGCAGCTTCCACCTCGGCTTCCTTGGAGACATCGACCACGCGGGTCTC
CACTTTACCGGAGCGTTCGGGCACGACCTCGTTCACTTTGTTCAAGGCCT
TTTCGAGCCCGGGGCCACTGATATCGGTCATCAGGACGGAGGCGCCTTCG
CGGAGCATGAGGATGGTGGTTTCGAGACCGATGCCACTGCATGTGGAAAT
AGTATTGTCAGCTTCTTGCTTCCTTTTGTACATATCCACCCCAATTGCAA
CCATTCAGACACAGAAGGAGAAAGAGAAAGAGGAAAGAGAGAGAAATACC
CCGCAGCACCAGTAACGAGAGCGTTCTTTCCAGCAAGTCGTCCAACCATT
GTGCTAGATTCTGAGACAATTGTGTGTATGTATGTGTCTTTACAATAAAG
TGAAGGGTAGAATAATTGAACCGATAATCCAGAGAGCGAACCGGCCACGG
TTTTAAGTACCACAGCAGACCACCAACTCACCCCTTGCTGCATAACCAGT
TTACCTAATGAAATAAGCTAGCTAGTTCCATGATACGTAGCTACCCCTCC
TTCCTCGGCAAACATCAGTCCAGCTCATTACTTTCACCGCTGTTACTAAC
AGCAGATGAGCTGGGACCGCTCCACTCACTGCTTGGCTGACTATCTGACT
ATCTATCCGCCAGCGTCGGAAGCGCAAGCGCGCCCGATAAGCTGGCTATG
TAGCTGGCTTCCTGGCTGGCTGATAAG

Coding sequence (CDS) from alignment at ch1:2261537..2264763-

>KJC3_000903-T1 ID=KJC3_000903-T1|Name=KJC3_000903-T1|organism=Aspergillus niger KJC3|type=CDS|length=3282bp|location=Sequence derived from alignment at ch1:2261537..2264763- (Aspergillus niger KJC3)
ACGGCCAAAGGCGATATGAACGGCACGATATTCGACCACCTGACTGCTGC
TAATTCTCTTTTGATTCGACTGCTCTCACAAAGCGATACAGCGGTACCGA
AAGACTTGAAAGACTTTGTTATCGAATACTACACCTACACTGCTGCCGTG
AGCATGATCTCGGTCGATGCTCGTGTCAGTACTCAACTATTCTTGAACTT
TGACCTCGAACAACGGGCGCGTCAGCTGCTGCAATCGGAATACGTGGGTA
ATCTATGTGGTTGCTGGCTGGAGTTGTTGCTGCTGATCCCCTGCATCTTC
GACTTAGGTCGGCAGTGGATGATGCACGATGGCCGACCGGCCATGCCCAC
TGCAGATGATATTGCCATGTTCAGCTCGCTGCAAGTGCAAATCATGCGAT
GGACACCGTATGCCTCAGTCAGCCCGGAGGTATTTCTGGCAGGGCGGATC
TTTCAGCAGGCGATGCTCCTTTACCTCTACACCGCGCTAGGCGGGTTCTC
GCGGGCGGAGAACGGCATGTATCAGGGGCTGATCGAGACTGCGATTGCAG
AGGCAATGTCTTATCTGGATCAGCTGTCTGGGACTGCGCGGATCAACTCG
GGTCTCTGTTGGCCGATTGCTGTGGTGGGGTCTTGCTTATCCAATGCGGA
ACACCAGGATAGTCTACGCCGCCGGCTCACCGTCATGGTGAACACGTTTG
GACTCGGCAACATGCAGAGGACTCTACTCATACTGGAACACATGTGGCAG
ATGCCGCTGGACGAAGCAGGTCCATGGAACATCTGTCGAGCCATGCAACG
GAATCAAATATGGATATCGTTTGCCTAAATGCCGCCTAGTAGACGGCCGC
GTACCGACCCCATCGTCCGCGTCCGCACCGGTTGCTGGGCCTGCAGACGC
CGCAAGAAGAAATGTGATGAAGCCAAACCAGTCTGTGGGGGATGCGTGCG
AAATAAGCTCACTTGCCAGTGGCCGACCATCATCCCGGGCCAACCCAAGG
CCAACAATATCTCCTTCATGCCTGAAGATGATGATCAGCAAAATCGTCCA
GGTGGCGAAGAGGGCCCCTCTCGCCAGATGAGCGTGAACCGGGAAACGTC
CAGCTCGATCGAGTCCCGTTCTACATCCCCTTCTTCCCCAGAGGAGATAC
TACGGGAGTCGGAATCTCCAGAAGACACGTCTCGCGCGTCTTCTGCACCA
TGTCCCTCGATTTCGATGGATCTTGCTCAGATTCCTGCCATCGGCAGCAG
TCAAGTCCTAGGAACGTCTGCCACCGTTAGCAATCTACTCCCCCGGAGCT
TGTCCATGTTCCCAGGCCATGGGCCTGACTCTTATGAGCTGTTGAGCCAC
TATTTGGCAACAACAGCCGACTGCATGGCGAACGGGTCTACCCCTATCAA
TCCATTCTTGGTTCAAATCGTGCCACTCGCTTTCAGCAGCGATCTTCTGC
TTCAGCTGGTTCTGACGCAGAGTGCTGCTCACCGGGCGTTTCGCTGTCAC
ATGGAGTCTGACGAGGTCGCTCAGAGACACTACACGTCAGCCCTACAACT
ATTCCGAAAAGGAGTCACCGAATTTATTGACGGGAAAGAGTCAAATCCGC
TCATGCTTACGGTAGGAGCGTTGGTGATGTGCTTTACTGAGACGGCCAAA
GGCGATATGAACGGCACGATATTCGACCACCTGACTGCTGCTAATTCTCT
TTTGATTCGACTGCTCTCACAAAGCGATACAGCGGTACCGAAAGACTTGA
AAGACTTTGTTATCGAATACTACACCTACACTGCTGCCGTGAGCATGATC
TCGGTCGATGCTCGTGTCAGTACTCAACTATTCTTGAACTTTGACCTCGA
ACAACGGGCGCGTCAGCTGCTGCAATCGGAATACGTGGGTAATCTATGTG
GTTGCTGGCTGGAGTTGTTGCTGCTGATCCCCTGCATCTTCGACTTAGGT
CGGCAGTGGATGATGCACGATGGCCGACCGGCCATGCCCACTGCAGATGA
TATTGCCATGTTCAGCTCGCTGCAAGTGCAAATCATGCGATGGACACCGT
ATGCCTCAGTCAGCCCGGAGGTATTTCTGGCAGGGCGGATCTTTCAGCAG
GCGATGCTCCTTTACCTCTACACCGCGCTAGGCGGGTTCTCGCGGGCGGA
GAACGGCATGTATCAGGGGCTGATCGAGACTGCGATTGCAGAGGCAATGT
CTTATCTGGATCAGCTGTCTGGGACTGCGCGGATCAACTCGGGTCTCTGT
TGGCCGATTGCTGTGGTGGGGTCTTGCTTATCCAATGCGGAACACCAGGA
TAGTCTACGCCGCCGGCTCACCGTCATGGTGAACACGTTTGGACTCGGCA
ACATGCAGAGGACTCTACTCATACTGGAACACATGTGGCAGATGCCGCTG
GACGAAGCAGGTCCATGGAACATCTGTCGAGCCATGCAACGGAATCAAAT
ATGGATATCGTTTGCCTAAATGCCGCCTAGTAGACGGCCGCGTACCGACC
CCATCGTCCGCGTCCGCACCGGTTGCTGGGCCTGCAGACGCCGCAAGAAG
AAATGTGATGAAGCCAAACCAGTCTGTGGGGGATGCGTGCGAAATAAGCT
CACTTGCCAGTGGCCGACCATCATCCCGGGCCAACCCAAGGCCAACAATA
TCTCCTTCATGCCTGAAGATGATGATCAGCAAAATCGTCCAGGTGGCGAA
GAGGGCCCCTCTCGCCAGATGAGCGTGAACCGGGAAACGTCCAGCTCGAT
CGAGTCCCGTTCTACATCCCCTTCTTCCCCAGAGGAGATACTACGGGAGT
CGGAATCTCCAGAAGACACGTCTCGCGCGTCTTCTGCACCATGTCCCTCG
ATTTCGATGGATCTTGCTCAGATTCCTGCCATCGGCAGCAGTCAAGTCCT
AGGAACGTCTGCCACCGTTAGCAATCTACTCCCCCGGAGCTTGTCCATGT
TCCCAGGCCATGGGCCTGACTCTTATGAGCTGTTGAGCCACTATTTGGCA
ACAACAGCCGACTGCATGGCGAACGGGTCTACCCCTATCAATCCATTCTT
GGTTCAAATCGTGCCACTCGCTTTCAGCAGCGATCTTCTGCTTCAGCTGG
TTCTGACGCAGAGTGCTGCTCACCGGGCGTTTCGCTGTCACATGGAGTCT
GACGAGGTCGCTCAGAGACACTACACGTCAGCCCTACAACTATTCCGAAA
AGGAGTCACCGAATTTATTGACGGGAAAGAGTCAAATCCGCTCATGCTTA
CGGTAGGAGCGTTGGTGATGTGCTTTACTGAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0042025	host cell nucleus

Vocabulary: **Molecular Function**
Term	Definition
GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270	zinc ion binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
KJC3_000903	KJC3_000903	Aspergillus niger KJC3	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_000903-T1	KJC3_000903-T1-protein	Aspergillus niger KJC3	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_000903-T1.cds	KJC3_000903-T1.cds	Aspergillus niger KJC3	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_000903-T1.utr3p1	KJC3_000903-T1.utr3p1	Aspergillus niger KJC3	three_prime_UTR

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_000903-T1.exon2	KJC3_000903-T1.exon2	Aspergillus niger KJC3	exon
KJC3_000903-T1.exon1	KJC3_000903-T1.exon1	Aspergillus niger KJC3	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
KJC3_000903-T1.utr5p1	KJC3_000903-T1.utr5p1	Aspergillus niger KJC3	five_prime_UTR

Properties


Property Name	Value
DBxref	InterPro:IPR036864
DBxref	InterPro:IPR021858
DBxref	InterPro:IPR001138
DBxref	PFAM:PF00172
DBxref	PFAM:PF11951
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC3	2021-10-31

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
ch1	supercontig	ch1:2261537..2264763 -

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KJC3_000903-T1, KJC3_000903-T1 (mRNA) Aspergillus niger KJC3