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KJC3_000904-T1, KJC3_000904-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000904-T1
Unique NameKJC3_000904-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2264978..2266676-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000904-T1 ID=KJC3_000904-T1|Name=KJC3_000904-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1699bp|location=Sequence derived from alignment at ch1:2264978..2266676- (Aspergillus niger KJC3)
CCCATCTATACACGTCTCCAATTTGACTCTACTTACCACAACGACAATAC
CAGTTCACAGTTCAGAAGAGAAGAAGTATCTAACTATGGATTTCCCAACC
AGACCACCACCCTCCCAAGAATCCCTCCAACGCTACTACATTGGCAAGGA
CATCAGCTCCGTCCCCAAACCCGCCGTTGTCCTAGATGTAGCCATCATCA
AGCGCCATTGCGCATCCATGCTGGATGCTGTGAAGGCATTGGATGTGGGG
TTTCGAGCGCATGTCAAGACACACAAAGTATGGACCCTTCGCTTCCATTT
ACACCATCCTGATTCAAAGGGTGTGTGATGACTGATATGATGACAGACTC
CCCAAGTCGCCCGTCTTCAAGCCGGGGAGGACAAATCTATACCCGCAAAC
TTTGTCATCTCCACCCTTCTAGAAGGGGAGACGCTTCTCCCACTTTTTAA
AGATCTGCGGGAAAGCGGAAGAAAGGTCAATGTTCTCTATGGCATACCTC
TTGTGCCGTCTCAAGTTCCCAGGTTGGCTGCGTTAGCGCGTGAATTAGGC
GAGGGGAGTATTTCTGTCATGATCGATCATCCAGATCAGGTACAGTATCT
GACTGAGTTCCGGCAACTGGCTGGCCATGCAGCAGCGGTGTTTCTCAAGG
TAGATTCGGGATATCATCGGGCGGGACTCCCGCCTTCTATGTTGAATAAG
GGGGGCTTGATAGAGAAGGTGATTGAGGGGGAGAGGGAGGGGACGTTGGT
TCTGCTGGGGGTTTACTCGCATAACAGTTTGAGTTATGGGGGTGATACGC
CAGAAGAGGTGATGGGGTTTTTGATGCAGGAGATCACAGGGTGTCGGGAG
GCCTTGCGGAAGAACAAGGATTCGTTCGCTTTGCCTGGTGGTAAGGGGAG
GGAGTTAGTGGTTAGTGTTGGTGCCACGCCGCAGGTCGTTGTGGTGAAGA
AGTTACTTGAGGAGGAGGGACAACTGAATGAGGAGGCGAGGCGATTGAAG
AACTTGTTGCATGAGAAGGATGTAGACGGTGAGTTGTCGATCAAAGTCGA
GCTTCATGCGGGTGTCTACCCCGTTCTGGATATGCAGCAGTTGGGCACGA
ACATCCATCCTACTGGGGACGCCGAGAAAGAGGTTGGCATTTCGGTAGTA
GCAGAGGTTTGCAGCGTTTATAATGATGCTGAGCGGTCAAAACCTGAGGC
CTTGGTGGCTGCTGGGTCGTTGGCTTTGGGGAGGGAGCCGTGCAAGTCGT
ATCCGGGATGGGGCGTGGTTGGGGATTGGAGACGCGAGAAGGGGTCATCG
CGACTGATTGTGGATCGGATCAGCCAAGAACATGCAATTGTCGCGTGGGA
AGTAGGAGATGGACCTGCAATTCCGCTCAAGGTCGGCCAGACTGTGAGGA
TTTATCCGAATCATGCGTGCGTGACCGGGGCCATGTACGGGTGGTATTTG
GTGGTGGATTCGAGTCGAGATGGGGACGGATCGACGATTGTGGATGTGTG
GCCGAGACCGACGGGATGGTGATTGAATTGTCTCGAGTATTTATAAGTTG
TCGGATAGACGAATATTCAGATTCTTGTTTGTTGTCTGTAGTAGATATAA
GATGGTTCTGTTGTGTGGGTGGCGCCATTAACCAGTTGGCATCTGGCATG
GCAGCTATCCGGACCATTTGGATAGGAGGTAATTCACCTTCGTCAGAAC
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Coding sequence (CDS) from alignment at ch1:2264978..2266676-

>KJC3_000904-T1 ID=KJC3_000904-T1|Name=KJC3_000904-T1|organism=Aspergillus niger KJC3|type=CDS|length=2736bp|location=Sequence derived from alignment at ch1:2264978..2266676- (Aspergillus niger KJC3)
ACTCCCCAAGTCGCCCGTCTTCAAGCCGGGGAGGACAAATCTATACCCGC
AAACTTTGTCATCTCCACCCTTCTAGAAGGGGAGACGCTTCTCCCACTTT
TTAAAGATCTGCGGGAAAGCGGAAGAAAGGTCAATGTTCTCTATGGCATA
CCTCTTGTGCCGTCTCAAGTTCCCAGGTTGGCTGCGTTAGCGCGTGAATT
AGGCGAGGGGAGTATTTCTGTCATGATCGATCATCCAGATCAGGTACAGT
ATCTGACTGAGTTCCGGCAACTGGCTGGCCATGCAGCAGCGGTGTTTCTC
AAGGTAGATTCGGGATATCATCGGGCGGGACTCCCGCCTTCTATGTTGAA
TAAGGGGGGCTTGATAGAGAAGGTGATTGAGGGGGAGAGGGAGGGGACGT
TGGTTCTGCTGGGGGTTTACTCGCATAACAGTTTGAGTTATGGGGGTGAT
ACGCCAGAAGAGGTGATGGGGTTTTTGATGCAGGAGATCACAGGGTGTCG
GGAGGCCTTGCGGAAGAACAAGGATTCGTTCGCTTTGCCTGGTGGTAAGG
GGAGGGAGTTAGTGGTTAGTGTTGGTGCCACGCCGCAGGTCGTTGTGGTG
AAGAAGTTACTTGAGGAGGAGGGACAACTGAATGAGGAGGCGAGGCGATT
GAAGAACTTGTTGCATGAGAAGGATGTAGACGGTGAGTTGTCGATCAAAG
TCGAGCTTCATGCGGGTGTCTACCCCGTTCTGGATATGCAGCAGTTGGGC
ACGAACATCCATCCTACTGGGGACGCCGAGAAAGAGGTTGGCATTTCGGT
AGTAGCAGAGGTTTGCAGCGTTTATAATGATGCTGAGCGGTCAAAACCTG
AGGCCTTGGTGGCTGCTGGGTCGTTGGCTTTGGGGAGGGAGCCGTGCAAG
TCGTATCCGGGATGGGGCGTGGTTGGGGATTGGAGACGCGAGAAGGGGTC
ATCGCGACTGATTGTGGATCGGATCAGCCAAGAACATGCAATTGTCGCGT
GGGAAGTAGGAGATGGACCTGCAATTCCGCTCAAGGTCGGCCAGACTGTG
AGGATTTATCCGAATCATGCGTGCGTGACCGGGGCCATGTACGGGTGGTA
TTTGGTGGTGGATTCGAGTCGAGATGGGGACGGATCGACGATTGTGGATG
TGTGGCCGAGACCGACGGGATGGTGAATGGATTTCCCAACCAGACCACCA
CCCTCCCAAGAATCCCTCCAACGCTACTACATTGGCAAGGACATCAGCTC
CGTCCCCAAACCCGCCGTTGTCCTAGATGTAGCCATCATCAAGCGCCATT
GCGCATCCATGCTGGATGCTGTGAAGGCATTGGATGTGGGGTTTCGAGCG
CATGTCAAGACACACAAAACTCCCCAAGTCGCCCGTCTTCAAGCCGGGGA
GGACAAATCTATACCCGCAAACTTTGTCATCTCCACCCTTCTAGAAGGGG
AGACGCTTCTCCCACTTTTTAAAGATCTGCGGGAAAGCGGAAGAAAGGTC
AATGTTCTCTATGGCATACCTCTTGTGCCGTCTCAAGTTCCCAGGTTGGC
TGCGTTAGCGCGTGAATTAGGCGAGGGGAGTATTTCTGTCATGATCGATC
ATCCAGATCAGGTACAGTATCTGACTGAGTTCCGGCAACTGGCTGGCCAT
GCAGCAGCGGTGTTTCTCAAGGTAGATTCGGGATATCATCGGGCGGGACT
CCCGCCTTCTATGTTGAATAAGGGGGGCTTGATAGAGAAGGTGATTGAGG
GGGAGAGGGAGGGGACGTTGGTTCTGCTGGGGGTTTACTCGCATAACAGT
TTGAGTTATGGGGGTGATACGCCAGAAGAGGTGATGGGGTTTTTGATGCA
GGAGATCACAGGGTGTCGGGAGGCCTTGCGGAAGAACAAGGATTCGTTCG
CTTTGCCTGGTGGTAAGGGGAGGGAGTTAGTGGTTAGTGTTGGTGCCACG
CCGCAGGTCGTTGTGGTGAAGAAGTTACTTGAGGAGGAGGGACAACTGAA
TGAGGAGGCGAGGCGATTGAAGAACTTGTTGCATGAGAAGGATGTAGACG
GTGAGTTGTCGATCAAAGTCGAGCTTCATGCGGGTGTCTACCCCGTTCTG
GATATGCAGCAGTTGGGCACGAACATCCATCCTACTGGGGACGCCGAGAA
AGAGGTTGGCATTTCGGTAGTAGCAGAGGTTTGCAGCGTTTATAATGATG
CTGAGCGGTCAAAACCTGAGGCCTTGGTGGCTGCTGGGTCGTTGGCTTTG
GGGAGGGAGCCGTGCAAGTCGTATCCGGGATGGGGCGTGGTTGGGGATTG
GAGACGCGAGAAGGGGTCATCGCGACTGATTGTGGATCGGATCAGCCAAG
AACATGCAATTGTCGCGTGGGAAGTAGGAGATGGACCTGCAATTCCGCTC
AAGGTCGGCCAGACTGTGAGGATTTATCCGAATCATGCGTGCGTGACCGG
GGCCATGTACGGGTGGTATTTGGTGGTGGATTCGAGTCGAGATGGGGACG
GATCGACGATTGTGGATGTGTGGCCGAGACCGACGGGATGGTGAATGGAT
TTCCCAACCAGACCACCACCCTCCCAAGAATCCCTCCAACGCTACTACAT
TGGCAAGGACATCAGCTCCGTCCCCAAACCCGCCGTTGTCCTAGATGTAG
CCATCATCAAGCGCCATTGCGCATCCATGCTGGATGCTGTGAAGGCATTG
GATGTGGGGTTTCGAGCGCATGTCAAGACACACAAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000904KJC3_000904Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000904-T1KJC3_000904-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000904-T1.cdsKJC3_000904-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000904-T1.utr3p1KJC3_000904-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000904-T1.exon2KJC3_000904-T1.exon2Aspergillus niger KJC3exon
KJC3_000904-T1.exon1KJC3_000904-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000904-T1.utr5p1KJC3_000904-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR029066
DBxrefInterPro:IPR042208
DBxrefInterPro:IPR001608
DBxrefInterPro:IPR026956
DBxrefPFAM:PF14031
DBxrefPFAM:PF01168
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2264978..2266676 -
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