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KJC3_000910-T1, KJC3_000910-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000910-T1
Unique NameKJC3_000910-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2278667..2280286-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000910-T1 ID=KJC3_000910-T1|Name=KJC3_000910-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1620bp|location=Sequence derived from alignment at ch1:2278667..2280286- (Aspergillus niger KJC3)
AATCACCCCGCGTGGCTCTGTTCTTGACCATGGCTACCGTTCAGACCATC
AACGTTACTCTTCCCTCCCTGCCTTCTGGCTGGAGTGCCGATAAGGACTT
CAAGGCCGTTGGCACCGTCTCCGCTGCCACCCAGAGGAACCTTGAGCCCG
TTGGCCCTCACTTCCTGGCCCACGCTCGCAGAGTATGTGTCCAGCCACAG
GTCTAGTGCGATAATGGCTCATTGCTAACAACCCTCCAGAAGCGTCACCA
CCGTACCTTCTCCGAGGATGAGAGAATCCAGGCTCAGCAGAATGTGAAGA
GCACTGAGGATGAGGAGGATGATGACATCTCTGAGGATGAGGACCCTATG
ATGCTCTCCAGAGATGCCAAGGACTGGAAGGTATGCATTACCAGGGTCAC
TGATACTGGCATGATTCTTACACATTACAGAGCCAAGATCACTACCAGGT
CCTCGGTCTGTCCAAGTACCGCTGGCGTGCCACCCCCGAGCAGATCAAGC
GCGCCCACCGCAAGAAGGTCCTCCGCCACCACCCCGACAAGAAGGCCGCC
ATGGGTGATCGCGACGAGAACGACAGCTTCTTCAAGTGTATCCAGAAGGC
TACTGAGGTTCTCCTGGACCCCACTAAGCGTCGTCAGTTCGACTCCGTAG
ACGAGGCCGCCGATGTCGAGCCCCCCACCAAGAAGGAGGCTGCCAAGGGC
AACTTCTTCAAGCTCTGGCGCCCTGTCTTCGAGTCCGAGGCCCGTTTCTC
CAAGATCCAGCCTGTGCCCCAGCTGGGTGACGAGAACAGCACCCAGGAGG
AGGTCGAGACCTTCTACAACTTCTGGTACGACTTCGACAGCTGGCGTACC
TTTGAGTACCTGGACGAGGATGTGCCGGATGACAACGAGAACCGTGACCA
GAAGCGTCACATGGAGAAGAAGAACGCCAACGCCCGCCGCAAGCGCAAGA
CCGAGGACACTACCCGTCTCCGCCACCTTGTGGACGACTGCGCCGCTGGT
GACGAGCGTATCAAGAAGTTCCGTAAGGCTGCCCGTGCCGATAAGGACCG
CAAGCGTCTCGAGAAGGAGGCTGAGATCAAGCGTCTGGCCGAGGAGAAGG
AGAAGGCCCGCCTGGAGGAGGAGCAGCGCAAGAAGGACGCCGAGGAGGCT
GCCAAGGCCGAGCGTGAGCAGAACAAGAAGGCCAAGGAGGCTGCTAAGAA
CGCCGCCAAGAAGAACAAGCGTGTCCTCAAGGGCTCTGTCAAGGACGTCA
ACTACTTTGGCGAGGGTGGCGAGCCCTCCGCTGCTCAGGTTGACTCCGTG
CTGGGCGACGTTGACCTCGTCATCAGCAAGATCGATGCTGAGGAGCTTGC
TGGTCTGGCTGGACGCCTTAGCGCCGCTGGCAAGGACGCTGCTGCCGTCA
AGAACGTGTACGCCGAAGAGGTCAAGAGACTGGTTGGTGCTGGCAAGCTG
AAGGAGGGTGAGGCCAAGTTCTTTGCTTAAGCGGAGACTGGATGGGGGAT
AGAATGTATGATGCCGATGGATTTACATGCTACGCAGGTATGACCAGACA
GGTCAACAAGGTATATAGATCGATAGAGTTGACTACAGCAAAATAATGAG
AGCAACGACTAATGGAGTTC
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Coding sequence (CDS) from alignment at ch1:2278667..2280286-

>KJC3_000910-T1 ID=KJC3_000910-T1|Name=KJC3_000910-T1|organism=Aspergillus niger KJC3|type=CDS|length=4032bp|location=Sequence derived from alignment at ch1:2278667..2280286- (Aspergillus niger KJC3)
AGCCAAGATCACTACCAGGTCCTCGGTCTGTCCAAGTACCGCTGGCGTGC
CACCCCCGAGCAGATCAAGCGCGCCCACCGCAAGAAGGTCCTCCGCCACC
ACCCCGACAAGAAGGCCGCCATGGGTGATCGCGACGAGAACGACAGCTTC
TTCAAGTGTATCCAGAAGGCTACTGAGGTTCTCCTGGACCCCACTAAGCG
TCGTCAGTTCGACTCCGTAGACGAGGCCGCCGATGTCGAGCCCCCCACCA
AGAAGGAGGCTGCCAAGGGCAACTTCTTCAAGCTCTGGCGCCCTGTCTTC
GAGTCCGAGGCCCGTTTCTCCAAGATCCAGCCTGTGCCCCAGCTGGGTGA
CGAGAACAGCACCCAGGAGGAGGTCGAGACCTTCTACAACTTCTGGTACG
ACTTCGACAGCTGGCGTACCTTTGAGTACCTGGACGAGGATGTGCCGGAT
GACAACGAGAACCGTGACCAGAAGCGTCACATGGAGAAGAAGAACGCCAA
CGCCCGCCGCAAGCGCAAGACCGAGGACACTACCCGTCTCCGCCACCTTG
TGGACGACTGCGCCGCTGGTGACGAGCGTATCAAGAAGTTCCGTAAGGCT
GCCCGTGCCGATAAGGACCGCAAGCGTCTCGAGAAGGAGGCTGAGATCAA
GCGTCTGGCCGAGGAGAAGGAGAAGGCCCGCCTGGAGGAGGAGCAGCGCA
AGAAGGACGCCGAGGAGGCTGCCAAGGCCGAGCGTGAGCAGAACAAGAAG
GCCAAGGAGGCTGCTAAGAACGCCGCCAAGAAGAACAAGCGTGTCCTCAA
GGGCTCTGTCAAGGACGTCAACTACTTTGGCGAGGGTGGCGAGCCCTCCG
CTGCTCAGGTTGACTCCGTGCTGGGCGACGTTGACCTCGTCATCAGCAAG
ATCGATGCTGAGGAGCTTGCTGGTCTGGCTGGACGCCTTAGCGCCGCTGG
CAAGGACGCTGCTGCCGTCAAGAACGTGTACGCCGAAGAGGTCAAGAGAC
TGGTTGGTGCTGGCAAGCTGAAGGAGGGTGAGGCCAAGTTCTTTGCTTAA
AAGCGTCACCACCGTACCTTCTCCGAGGATGAGAGAATCCAGGCTCAGCA
GAATGTGAAGAGCACTGAGGATGAGGAGGATGATGACATCTCTGAGGATG
AGGACCCTATGATGCTCTCCAGAGATGCCAAGGACTGGAAGATGGCTACC
GTTCAGACCATCAACGTTACTCTTCCCTCCCTGCCTTCTGGCTGGAGTGC
CGATAAGGACTTCAAGGCCGTTGGCACCGTCTCCGCTGCCACCCAGAGGA
ACCTTGAGCCCGTTGGCCCTCACTTCCTGGCCCACGCTCGCAGAAGCCAA
GATCACTACCAGGTCCTCGGTCTGTCCAAGTACCGCTGGCGTGCCACCCC
CGAGCAGATCAAGCGCGCCCACCGCAAGAAGGTCCTCCGCCACCACCCCG
ACAAGAAGGCCGCCATGGGTGATCGCGACGAGAACGACAGCTTCTTCAAG
TGTATCCAGAAGGCTACTGAGGTTCTCCTGGACCCCACTAAGCGTCGTCA
GTTCGACTCCGTAGACGAGGCCGCCGATGTCGAGCCCCCCACCAAGAAGG
AGGCTGCCAAGGGCAACTTCTTCAAGCTCTGGCGCCCTGTCTTCGAGTCC
GAGGCCCGTTTCTCCAAGATCCAGCCTGTGCCCCAGCTGGGTGACGAGAA
CAGCACCCAGGAGGAGGTCGAGACCTTCTACAACTTCTGGTACGACTTCG
ACAGCTGGCGTACCTTTGAGTACCTGGACGAGGATGTGCCGGATGACAAC
GAGAACCGTGACCAGAAGCGTCACATGGAGAAGAAGAACGCCAACGCCCG
CCGCAAGCGCAAGACCGAGGACACTACCCGTCTCCGCCACCTTGTGGACG
ACTGCGCCGCTGGTGACGAGCGTATCAAGAAGTTCCGTAAGGCTGCCCGT
GCCGATAAGGACCGCAAGCGTCTCGAGAAGGAGGCTGAGATCAAGCGTCT
GGCCGAGGAGAAGGAGAAGGCCCGCCTGGAGGAGGAGCAGCGCAAGAAGG
ACGCCGAGGAGGCTGCCAAGGCCGAGCGTGAGCAGAACAAGAAGGCCAAG
GAGGCTGCTAAGAACGCCGCCAAGAAGAACAAGCGTGTCCTCAAGGGCTC
TGTCAAGGACGTCAACTACTTTGGCGAGGGTGGCGAGCCCTCCGCTGCTC
AGGTTGACTCCGTGCTGGGCGACGTTGACCTCGTCATCAGCAAGATCGAT
GCTGAGGAGCTTGCTGGTCTGGCTGGACGCCTTAGCGCCGCTGGCAAGGA
CGCTGCTGCCGTCAAGAACGTGTACGCCGAAGAGGTCAAGAGACTGGTTG
GTGCTGGCAAGCTGAAGGAGGGTGAGGCCAAGTTCTTTGCTTAAAAGCGT
CACCACCGTACCTTCTCCGAGGATGAGAGAATCCAGGCTCAGCAGAATGT
GAAGAGCACTGAGGATGAGGAGGATGATGACATCTCTGAGGATGAGGACC
CTATGATGCTCTCCAGAGATGCCAAGGACTGGAAGATGGCTACCGTTCAG
ACCATCAACGTTACTCTTCCCTCCCTGCCTTCTGGCTGGAGTGCCGATAA
GGACTTCAAGGCCGTTGGCACCGTCTCCGCTGCCACCCAGAGGAACCTTG
AGCCCGTTGGCCCTCACTTCCTGGCCCACGCTCGCAGAAGCCAAGATCAC
TACCAGGTCCTCGGTCTGTCCAAGTACCGCTGGCGTGCCACCCCCGAGCA
GATCAAGCGCGCCCACCGCAAGAAGGTCCTCCGCCACCACCCCGACAAGA
AGGCCGCCATGGGTGATCGCGACGAGAACGACAGCTTCTTCAAGTGTATC
CAGAAGGCTACTGAGGTTCTCCTGGACCCCACTAAGCGTCGTCAGTTCGA
CTCCGTAGACGAGGCCGCCGATGTCGAGCCCCCCACCAAGAAGGAGGCTG
CCAAGGGCAACTTCTTCAAGCTCTGGCGCCCTGTCTTCGAGTCCGAGGCC
CGTTTCTCCAAGATCCAGCCTGTGCCCCAGCTGGGTGACGAGAACAGCAC
CCAGGAGGAGGTCGAGACCTTCTACAACTTCTGGTACGACTTCGACAGCT
GGCGTACCTTTGAGTACCTGGACGAGGATGTGCCGGATGACAACGAGAAC
CGTGACCAGAAGCGTCACATGGAGAAGAAGAACGCCAACGCCCGCCGCAA
GCGCAAGACCGAGGACACTACCCGTCTCCGCCACCTTGTGGACGACTGCG
CCGCTGGTGACGAGCGTATCAAGAAGTTCCGTAAGGCTGCCCGTGCCGAT
AAGGACCGCAAGCGTCTCGAGAAGGAGGCTGAGATCAAGCGTCTGGCCGA
GGAGAAGGAGAAGGCCCGCCTGGAGGAGGAGCAGCGCAAGAAGGACGCCG
AGGAGGCTGCCAAGGCCGAGCGTGAGCAGAACAAGAAGGCCAAGGAGGCT
GCTAAGAACGCCGCCAAGAAGAACAAGCGTGTCCTCAAGGGCTCTGTCAA
GGACGTCAACTACTTTGGCGAGGGTGGCGAGCCCTCCGCTGCTCAGGTTG
ACTCCGTGCTGGGCGACGTTGACCTCGTCATCAGCAAGATCGATGCTGAG
GAGCTTGCTGGTCTGGCTGGACGCCTTAGCGCCGCTGGCAAGGACGCTGC
TGCCGTCAAGAACGTGTACGCCGAAGAGGTCAAGAGACTGGTTGGTGCTG
GCAAGCTGAAGGAGGGTGAGGCCAAGTTCTTTGCTTAAAAGCGTCACCAC
CGTACCTTCTCCGAGGATGAGAGAATCCAGGCTCAGCAGAATGTGAAGAG
CACTGAGGATGAGGAGGATGATGACATCTCTGAGGATGAGGACCCTATGA
TGCTCTCCAGAGATGCCAAGGACTGGAAGATGGCTACCGTTCAGACCATC
AACGTTACTCTTCCCTCCCTGCCTTCTGGCTGGAGTGCCGATAAGGACTT
CAAGGCCGTTGGCACCGTCTCCGCTGCCACCCAGAGGAACCTTGAGCCCG
TTGGCCCTCACTTCCTGGCCCACGCTCGCAGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ZUO1KJC3_000910Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000910-T1KJC3_000910-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000910-T1.cdsKJC3_000910-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000910-T1.utr3p1KJC3_000910-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000910-T1.exon3KJC3_000910-T1.exon3Aspergillus niger KJC3exon
KJC3_000910-T1.exon2KJC3_000910-T1.exon2Aspergillus niger KJC3exon
KJC3_000910-T1.exon1KJC3_000910-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000910-T1.utr5p1KJC3_000910-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092634M1
DBxrefInterPro:IPR018253
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR032003
DBxrefInterPro:IPR042569
DBxrefInterPro:IPR001623
DBxrefPFAM:PF16717
DBxrefPFAM:PF00226
ProductRibosome-associated chaperone
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2278667..2280286 -
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