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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2280440..2281184+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000911-T2 ID=KJC3_000911-T2|Name=KJC3_000911-T2|organism=Aspergillus niger KJC3|type=mRNA|length=745bp|location=Sequence derived from alignment at ch1:2280440..2281184+ (Aspergillus niger KJC3)
CGCAGGGAACGACGGCCAGATTTCAACCTTTTCGCTTGTTGATTAGATCT
TCTTCTTATATATCTTTGTTGTTTTGGTTGTAAATCTATATTAAGGCTTC
TTCTTTTAGAGAGTGACGAGCTGCATTCGCCTGACGACCATTTTCTTTAT
CACCAGACCACCCGCTACTATCGCAGTACGCCACCCCAAAAGACGCAGTT
TACAAGGAGACAACTTCTCAAAGTGAAGATAACAGGTCCAATTCCTTGAT
AGATCCCACTATTCAACTACATAATGGCCTCCCAAACCGCCCTTTCCGCA
CGCAGTGCTTACCGCCAACTCCTCCGCGCTACCCGTATTGCCTTCCAGGG
TCAGTCGCCGCCTCAAGAGCCATAGGTCTGTTCAAGGCTAACCATTCTCT
ACATGCAGATGATGTCCGTGTTATGATTGCTGCGCGTCAAGAGGCTCGCC
GCAATTTCGACAGTCACCGCCGCGAAGGCATTGATACTCCGATGCAGATC
AACCATGCGCTCGAAGTGGCGAACATTCTCAGACACAACATTGTCCAGGG
TGTACGGGAACAAGACGATGAGAATGCCAAGTGGGGTGAGTAGCTATCAG
AGGATTTATATTATGGCTGAGTATATGACGCTGACTGGGGTTCCCATTAG
AACTCCGCATTCATGACGACATCGAGCGCGGCGATAACGACACCATCAGA
GTCAAGGGAAAGACTGTCAAGGTGGATAAGGCATGCTCGTCATAG back to topCoding sequence (CDS) from alignment at ch1:2280440..2281184+ >KJC3_000911-T2 ID=KJC3_000911-T2|Name=KJC3_000911-T2|organism=Aspergillus niger KJC3|type=CDS|length=1044bp|location=Sequence derived from alignment at ch1:2280440..2281184+ (Aspergillus niger KJC3)
ATGGCCTCCCAAACCGCCCTTTCCGCACGCAGTGCTTACCGCCAACTCCT
CCGCGCTACCCGTATTGCCTTCCAGGATGATGTCCGTGTTATGATTGCTG
CGCGTCAAGAGGCTCGCCGCAATTTCGACAGTCACCGCCGCGAAGGCATT
GATACTCCGATGCAGATCAACCATGCGCTCGAAGTGGCGAACATTCTCAG
ACACAACATTGTCCAGGGTGTACGGGAACAAGACGATGAGAATGCCAAGT
GGGAACTCCGCATTCATGACGACATCGAGCGCGGCGATAACGACACCATC
AGAGTCAAGGGAAAGACTGTCAAGGTGGATAAGGCATGCTCGTCATAGAT
GGCCTCCCAAACCGCCCTTTCCGCACGCAGTGCTTACCGCCAACTCCTCC
GCGCTACCCGTATTGCCTTCCAGGATGATGTCCGTGTTATGATTGCTGCG
CGTCAAGAGGCTCGCCGCAATTTCGACAGTCACCGCCGCGAAGGCATTGA
TACTCCGATGCAGATCAACCATGCGCTCGAAGTGGCGAACATTCTCAGAC
ACAACATTGTCCAGGGTGTACGGGAACAAGACGATGAGAATGCCAAGTGG
GAACTCCGCATTCATGACGACATCGAGCGCGGCGATAACGACACCATCAG
AGTCAAGGGAAAGACTGTCAAGGTGGATAAGGCATGCTCGTCATAGATGG
CCTCCCAAACCGCCCTTTCCGCACGCAGTGCTTACCGCCAACTCCTCCGC
GCTACCCGTATTGCCTTCCAGGATGATGTCCGTGTTATGATTGCTGCGCG
TCAAGAGGCTCGCCGCAATTTCGACAGTCACCGCCGCGAAGGCATTGATA
CTCCGATGCAGATCAACCATGCGCTCGAAGTGGCGAACATTCTCAGACAC
AACATTGTCCAGGGTGTACGGGAACAAGACGATGAGAATGCCAAGTGGGA
ACTCCGCATTCATGACGACATCGAGCGCGGCGATAACGACACCATCAGAG
TCAAGGGAAAGACTGTCAAGGTGGATAAGGCATGCTCGTCATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR008011 |
| Product | variant 2 |
| Product | mitochondrial |
| Product | Mitochondrial zinc maintenance protein 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2280440..2281184 + |
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