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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2287760..2289211- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000915-T1 ID=KJC3_000915-T1|Name=KJC3_000915-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1452bp|location=Sequence derived from alignment at ch1:2287760..2289211- (Aspergillus niger KJC3)
CATTCACCAAAAGTCTGCATAGCCAAATTACTCTGGCGCGCCTGATATTG
CTGAACTAGTCATGGCTATTCCATCAATTACTGCTCTTGGGGACGACCCC
AATACCGAGCATCGCCTAAACGCCTGTGCATATCAACAGTCAGCAATCAC
AACTTCTGGCAGCATCCAGTATGTGGCTTTCTATACTCCGCGGGAAGAGT
CGGACTCTAGAAGAGTGACAATTGCGCGCCATGATCTTCAAGACACTTCC
TCCAACTGGCAATACTTGACTTTCGAAGATTACGACCAGACGACCGATGA
CGGACATAATACGATATCCATAGGGATCTGTGCCGGTGATGGAACAATTC
ATGTGTCGTTTGACCACCACTGCGATGCGCTGAAATATCGCATCTCGCGA
TCAGGTCTGGCAAATGACACGAGCAAGTCGAGTTGGGTGGCAAGCAACTT
CAGCCCGATCCTAGATCATCTACCCGGCTGCGACGGTTTGTTGGACGTTA
CATATCCACGATTTATACCCGCAGCAAGAGAAATGTATTTTGAGTGTCGC
ATTGGAAAGTATGTAGGGTGCAAACTCCGGACAAGCAGAATCTGACGATC
ATCCGTAGAGCAGGTGCCGGCTCCGATGTCCTATATCGTTACAGTCCCGA
CACCGCCCAATTTGTCCATTTGGGAACCTATCTGGTTGGAAGACAGTGTA
ATCCATATCCCAATGGAATGTCCTATCATTTACCAACGAACAGCTTACAT
GTTACTTGGACTAACCGACATTTCATCGAGTATGAAGGAGCAAAGGACGG
TGCTTCCACGGCCCACAAAGCGCAAGCTGGACCTAATGGTCCCGAGAATA
ACGAAGGTTTATATTATGCGTACAGTCGAGACAATGGTGCTACATGGAAC
GGACCAAGTCAGAAGTCAGTGACTGTTCTGTCAGCACGTCCAGGGACCGG
ACTCGAGTCCCAAGATAGTCAACTACTCGTCAGGAATATCCCTCGAAACA
GTGGTATTATGAATCAGGAGGCACAGTACGTTGACTCTCAGGGAGGAGTG
CATGTCCTGAATCGAGAAAATACCACCGGAAAGGAGACATGGATGCATTA
CTACCGCTCTTCGTCGGACAACCAGTGGGCCTTTTTTGCGCTACCTGAAA
TCTATCCTACGCCTACAGGCCCTCGGGGCAAACTTGTCCATAGCGAGAAG
CTCAATTCTGTCTTCTTCATTCTTCCGTCGAATACGGGGAATGAACTGCT
GATTGCGCGGAGGAGTATGACTGATATAGATGGAGAGTTTCGTGTGGTAT
GGAGAGAACATGGATACAGTGGAGAACCACTGATCGACGAAGAGGCCTTC
ACGAAGTTTGAGCTTCTGTCTGTTCTCATATTGAGGGATGATAAAGAAGG
TAAAAGAAAGGTTACCGTGATACAGTTCGACATCAATGAACTGGCACAAT
GA back to topCoding sequence (CDS) from alignment at ch1:2287760..2289211- >KJC3_000915-T1 ID=KJC3_000915-T1|Name=KJC3_000915-T1|organism=Aspergillus niger KJC3|type=CDS|length=2682bp|location=Sequence derived from alignment at ch1:2287760..2289211- (Aspergillus niger KJC3)
AGCAGGTGCCGGCTCCGATGTCCTATATCGTTACAGTCCCGACACCGCCC
AATTTGTCCATTTGGGAACCTATCTGGTTGGAAGACAGTGTAATCCATAT
CCCAATGGAATGTCCTATCATTTACCAACGAACAGCTTACATGTTACTTG
GACTAACCGACATTTCATCGAGTATGAAGGAGCAAAGGACGGTGCTTCCA
CGGCCCACAAAGCGCAAGCTGGACCTAATGGTCCCGAGAATAACGAAGGT
TTATATTATGCGTACAGTCGAGACAATGGTGCTACATGGAACGGACCAAG
TCAGAAGTCAGTGACTGTTCTGTCAGCACGTCCAGGGACCGGACTCGAGT
CCCAAGATAGTCAACTACTCGTCAGGAATATCCCTCGAAACAGTGGTATT
ATGAATCAGGAGGCACAGTACGTTGACTCTCAGGGAGGAGTGCATGTCCT
GAATCGAGAAAATACCACCGGAAAGGAGACATGGATGCATTACTACCGCT
CTTCGTCGGACAACCAGTGGGCCTTTTTTGCGCTACCTGAAATCTATCCT
ACGCCTACAGGCCCTCGGGGCAAACTTGTCCATAGCGAGAAGCTCAATTC
TGTCTTCTTCATTCTTCCGTCGAATACGGGGAATGAACTGCTGATTGCGC
GGAGGAGTATGACTGATATAGATGGAGAGTTTCGTGTGGTATGGAGAGAA
CATGGATACAGTGGAGAACCACTGATCGACGAAGAGGCCTTCACGAAGTT
TGAGCTTCTGTCTGTTCTCATATTGAGGGATGATAAAGAAGGTAAAAGAA
AGGTTACCGTGATACAGTTCGACATCAATGAACTGGCACAATGAATGGCT
ATTCCATCAATTACTGCTCTTGGGGACGACCCCAATACCGAGCATCGCCT
AAACGCCTGTGCATATCAACAGTCAGCAATCACAACTTCTGGCAGCATCC
AGTATGTGGCTTTCTATACTCCGCGGGAAGAGTCGGACTCTAGAAGAGTG
ACAATTGCGCGCCATGATCTTCAAGACACTTCCTCCAACTGGCAATACTT
GACTTTCGAAGATTACGACCAGACGACCGATGACGGACATAATACGATAT
CCATAGGGATCTGTGCCGGTGATGGAACAATTCATGTGTCGTTTGACCAC
CACTGCGATGCGCTGAAATATCGCATCTCGCGATCAGGTCTGGCAAATGA
CACGAGCAAGTCGAGTTGGGTGGCAAGCAACTTCAGCCCGATCCTAGATC
ATCTACCCGGCTGCGACGGTTTGTTGGACGTTACATATCCACGATTTATA
CCCGCAGCAAGAGAAATGTATTTTGAGTGTCGCATTGGAAAAGCAGGTGC
CGGCTCCGATGTCCTATATCGTTACAGTCCCGACACCGCCCAATTTGTCC
ATTTGGGAACCTATCTGGTTGGAAGACAGTGTAATCCATATCCCAATGGA
ATGTCCTATCATTTACCAACGAACAGCTTACATGTTACTTGGACTAACCG
ACATTTCATCGAGTATGAAGGAGCAAAGGACGGTGCTTCCACGGCCCACA
AAGCGCAAGCTGGACCTAATGGTCCCGAGAATAACGAAGGTTTATATTAT
GCGTACAGTCGAGACAATGGTGCTACATGGAACGGACCAAGTCAGAAGTC
AGTGACTGTTCTGTCAGCACGTCCAGGGACCGGACTCGAGTCCCAAGATA
GTCAACTACTCGTCAGGAATATCCCTCGAAACAGTGGTATTATGAATCAG
GAGGCACAGTACGTTGACTCTCAGGGAGGAGTGCATGTCCTGAATCGAGA
AAATACCACCGGAAAGGAGACATGGATGCATTACTACCGCTCTTCGTCGG
ACAACCAGTGGGCCTTTTTTGCGCTACCTGAAATCTATCCTACGCCTACA
GGCCCTCGGGGCAAACTTGTCCATAGCGAGAAGCTCAATTCTGTCTTCTT
CATTCTTCCGTCGAATACGGGGAATGAACTGCTGATTGCGCGGAGGAGTA
TGACTGATATAGATGGAGAGTTTCGTGTGGTATGGAGAGAACATGGATAC
AGTGGAGAACCACTGATCGACGAAGAGGCCTTCACGAAGTTTGAGCTTCT
GTCTGTTCTCATATTGAGGGATGATAAAGAAGGTAAAAGAAAGGTTACCG
TGATACAGTTCGACATCAATGAACTGGCACAATGAATGGCTATTCCATCA
ATTACTGCTCTTGGGGACGACCCCAATACCGAGCATCGCCTAAACGCCTG
TGCATATCAACAGTCAGCAATCACAACTTCTGGCAGCATCCAGTATGTGG
CTTTCTATACTCCGCGGGAAGAGTCGGACTCTAGAAGAGTGACAATTGCG
CGCCATGATCTTCAAGACACTTCCTCCAACTGGCAATACTTGACTTTCGA
AGATTACGACCAGACGACCGATGACGGACATAATACGATATCCATAGGGA
TCTGTGCCGGTGATGGAACAATTCATGTGTCGTTTGACCACCACTGCGAT
GCGCTGAAATATCGCATCTCGCGATCAGGTCTGGCAAATGACACGAGCAA
GTCGAGTTGGGTGGCAAGCAACTTCAGCCCGATCCTAGATCATCTACCCG
GCTGCGACGGTTTGTTGGACGTTACATATCCACGATTTATACCCGCAGCA
AGAGAAATGTATTTTGAGTGTCGCATTGGAAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000915-T1.utr5p1 | KJC3_000915-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH145 |
| DBxref | PFAM:PF15892 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2287760..2289211 - |
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