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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2300850..2302708+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000920-T1 ID=KJC3_000920-T1|Name=KJC3_000920-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1859bp|location=Sequence derived from alignment at ch1:2300850..2302708+ (Aspergillus niger KJC3)
ATGTCCAGCCCTTCGCCTTCAAGCGAACAACCCCAATCTCGCAACCGCCC
TGGCTCCGCATGCACGGAATGCCGTCGCCGCAAGATGCGCTGTGATGGGA
AACATCCTCAATGTAATAATTGTTCTAACGCGGGTATAATATGTGTTTTC
AACCCCCAGCCTTCCCGTCGGGGTCCCAAAAAGGGACATTTGAAAAGCCT
GCAGGTGCGTATCGGTGAGTAGCTTGGTCAATCCCAAGATATCAACAAGA
ACTCATATGAAGTAGCGAATCTCGAGAATACACTGTTTGGACGGACACAG
GATCCTCTGTCCACGGAGATTTCCACAGACGGTGACGCTGCTGCGCAATC
CGCAATGCATGGCTGGGAATCCCAGTTAAACATGCCCCTTAATGAGTTCA
ACATTCCAGCGGGTGCACCAAAGTTGGGGACTGTACCGATTTCGGACTTA
TTACACGCCGAACTGTAGGTTTCATGTTTTCTTTTTCCGCGCTGTTGTGC
TGAGCAAATAAGTGACCAGTTGTACTTTGATCGTGCACATATTTTCGTCC
CCATTCTCAATGCACGGCGCTACCTTTCGTGGACCAGGGATGATAGTAAA
TCCATATCGAGAACATGCTTGCAATACGCCATGTGGACGATAACTACGTC
CAAGTCCGCCCAACTGGAACATCTCTGCGAACCACTCTACCAGTCAGCCC
GAGAGCTACTAGGATGTCTACAAGTAACAGCTGAAAATAGCAACATAGAC
CGGATAGAGCATGTTCAAGCATTACTGATACTTGCAGTTTACGAATTTAC
CCACCATACCTTTCAGCGTGGGTGGATGAGCGCCGGTCAGGGTATTCGAC
TTGTGCAGCTGATGAACTTGCACAAGATTGATCTCAACAAGGAGGGCAGA
GCAGGACCCGACGAGGCGAGCGGGTTGGATGATCCCGTTTGCACAGAGGA
AAGGCGTCGTGTCTTTTGGATAGCATACATACTAGACCGGCTTATCTCCT
TAAGACATGAGAGCCCATTGACCTTTGATGAGCGAGTCGTATGTCCTATC
GGTGGTTTCATGACTGGCCTATCCAGCTGACATATCGGACAGATAGCGAC
ACGGTTGCCCGCCAGAGAGGAGGCCTTCCAGATGGGTCAATTAAACCAGA
TGACTGGATTTCTCTCGAAGGCTATTACTGAAGATGGGCCTCTCCCGAAA
GCAGAACTTTCAGAAATGGTTATTCTAGCTACACTTTGCGGAAGAACAGT
ATTACACCGGCAGCAGGCAGCCGCTGAGCAAGCCGACTGCGGCATATCCA
ACAGCTTCTGGGAGCGACATCGCCGGCTAGACGCTATACTAGTCAAGAAG
GGTCAGGTTATTTCGACACTCCAGCCGGTGGCAACCATGATGCCTGCAGA
GCTGGCTTCTCTTATCCCAAATCTGATGATACAATCGGCTCTTCTATATC
ATTGTACGACGCTGCAGCTCCTAGCTGACGGAATTGAAAGCAGTGAGATG
GTCCTGCAATGTCGACAACGGGCAATCCTGGCTGCGCAGGAGATTATCCG
ATTGACAGAGGCAGTGCTCCAGCTGAATTATTTCGAGGTGATTGGCCAGG
TGCCTTGTGTTTGGCTACTTGAACTCACACATGATAGATTGCCCCATTCA
CACCGCTTCCCGTGCTTCTCTGCGCCAAAGTATTGATGATGTATCAAGAC
GCGGATCCCTCATGTGCGCTTCAGCTGCAGGAAGTTCTAGGTATGGTGCA
GAATCTGGCAAATACTAACCATTTATGCCGGGAGTGGGCTATCCAACACC
GTGATCTGTTCGGATCCGAATCCGACTTTGTCCATATTGAGGAGGAGAGC
CATGGCTAG back to topCoding sequence (CDS) from alignment at ch1:2300850..2302708+ >KJC3_000920-T1 ID=KJC3_000920-T1|Name=KJC3_000920-T1|organism=Aspergillus niger KJC3|type=CDS|length=8280bp|location=Sequence derived from alignment at ch1:2300850..2302708+ (Aspergillus niger KJC3)
ATGTCCAGCCCTTCGCCTTCAAGCGAACAACCCCAATCTCGCAACCGCCC
TGGCTCCGCATGCACGGAATGCCGTCGCCGCAAGATGCGCTGTGATGGGA
AACATCCTCAATGTAATAATTGTTCTAACGCGGGTATAATATGTGTTTTC
AACCCCCAGCCTTCCCGTCGGGGTCCCAAAAAGGGACATTTGAAAAGCCT
GCAGGTGCGTATCGCGAATCTCGAGAATACACTGTTTGGACGGACACAGG
ATCCTCTGTCCACGGAGATTTCCACAGACGGTGACGCTGCTGCGCAATCC
GCAATGCATGGCTGGGAATCCCAGTTAAACATGCCCCTTAATGAGTTCAA
CATTCCAGCGGGTGCACCAAAGTTGGGGACTGTACCGATTTCGGACTTAT
TACACGCCGAACTTGACCAGTTGTACTTTGATCGTGCACATATTTTCGTC
CCCATTCTCAATGCACGGCGCTACCTTTCGTGGACCAGGGATGATAGTAA
ATCCATATCGAGAACATGCTTGCAATACGCCATGTGGACGATAACTACGT
CCAAGTCCGCCCAACTGGAACATCTCTGCGAACCACTCTACCAGTCAGCC
CGAGAGCTACTAGGATGTCTACAAGTAACAGCTGAAAATAGCAACATAGA
CCGGATAGAGCATGTTCAAGCATTACTGATACTTGCAGTTTACGAATTTA
CCCACCATACCTTTCAGCGTGGGTGGATGAGCGCCGGTCAGGGTATTCGA
CTTGTGCAGCTGATGAACTTGCACAAGATTGATCTCAACAAGGAGGGCAG
AGCAGGACCCGACGAGGCGAGCGGGTTGGATGATCCCGTTTGCACAGAGG
AAAGGCGTCGTGTCTTTTGGATAGCATACATACTAGACCGGCTTATCTCC
TTAAGACATGAGAGCCCATTGACCTTTGATGAGCGAGTCATAGCGACACG
GTTGCCCGCCAGAGAGGAGGCCTTCCAGATGGGTCAATTAAACCAGATGA
CTGGATTTCTCTCGAAGGCTATTACTGAAGATGGGCCTCTCCCGAAAGCA
GAACTTTCAGAAATGGTTATTCTAGCTACACTTTGCGGAAGAACAGTATT
ACACCGGCAGCAGGCAGCCGCTGAGCAAGCCGACTGCGGCATATCCAACA
GCTTCTGGGAGCGACATCGCCGGCTAGACGCTATACTAGTCAAGAAGGGT
CAGGTTATTTCGACACTCCAGCCGGTGGCAACCATGATGCCTGCAGAGCT
GGCTTCTCTTATCCCAAATCTGATGATACAATCGGCTCTTCTATATCATT
GTACGACGCTGCAGCTCCTAGCTGACGGAATTGAAAGCAGTGAGATGGTC
CTGCAATGTCGACAACGGGCAATCCTGGCTGCGCAGGAGATTATCCGATT
GACAGAGGCAGTGCTCCAGCTGAATTATTTCGAGATTGCCCCATTCACAC
CGCTTCCCGTGCTTCTCTGCGCCAAAGTATTGATGATGTATCAAGACGCG
GATCCCTCATGTGCGCTTCAGCTGCAGGAAGTTCTAGGTATGGTGCAGAA
TCTGGCAAATACTAACCATTTATGCCGGGAGTGGGCTATCCAACACCGTG
ATCTGTTCGGATCCGAATCCGACTTTGTCCATATTGAGGAGGAGAGCCAT
GGCTAGATGTCCAGCCCTTCGCCTTCAAGCGAACAACCCCAATCTCGCAA
CCGCCCTGGCTCCGCATGCACGGAATGCCGTCGCCGCAAGATGCGCTGTG
ATGGGAAACATCCTCAATGTAATAATTGTTCTAACGCGGGTATAATATGT
GTTTTCAACCCCCAGCCTTCCCGTCGGGGTCCCAAAAAGGGACATTTGAA
AAGCCTGCAGGTGCGTATCGCGAATCTCGAGAATACACTGTTTGGACGGA
CACAGGATCCTCTGTCCACGGAGATTTCCACAGACGGTGACGCTGCTGCG
CAATCCGCAATGCATGGCTGGGAATCCCAGTTAAACATGCCCCTTAATGA
GTTCAACATTCCAGCGGGTGCACCAAAGTTGGGGACTGTACCGATTTCGG
ACTTATTACACGCCGAACTTGACCAGTTGTACTTTGATCGTGCACATATT
TTCGTCCCCATTCTCAATGCACGGCGCTACCTTTCGTGGACCAGGGATGA
TAGTAAATCCATATCGAGAACATGCTTGCAATACGCCATGTGGACGATAA
CTACGTCCAAGTCCGCCCAACTGGAACATCTCTGCGAACCACTCTACCAG
TCAGCCCGAGAGCTACTAGGATGTCTACAAGTAACAGCTGAAAATAGCAA
CATAGACCGGATAGAGCATGTTCAAGCATTACTGATACTTGCAGTTTACG
AATTTACCCACCATACCTTTCAGCGTGGGTGGATGAGCGCCGGTCAGGGT
ATTCGACTTGTGCAGCTGATGAACTTGCACAAGATTGATCTCAACAAGGA
GGGCAGAGCAGGACCCGACGAGGCGAGCGGGTTGGATGATCCCGTTTGCA
CAGAGGAAAGGCGTCGTGTCTTTTGGATAGCATACATACTAGACCGGCTT
ATCTCCTTAAGACATGAGAGCCCATTGACCTTTGATGAGCGAGTCATAGC
GACACGGTTGCCCGCCAGAGAGGAGGCCTTCCAGATGGGTCAATTAAACC
AGATGACTGGATTTCTCTCGAAGGCTATTACTGAAGATGGGCCTCTCCCG
AAAGCAGAACTTTCAGAAATGGTTATTCTAGCTACACTTTGCGGAAGAAC
AGTATTACACCGGCAGCAGGCAGCCGCTGAGCAAGCCGACTGCGGCATAT
CCAACAGCTTCTGGGAGCGACATCGCCGGCTAGACGCTATACTAGTCAAG
AAGGGTCAGGTTATTTCGACACTCCAGCCGGTGGCAACCATGATGCCTGC
AGAGCTGGCTTCTCTTATCCCAAATCTGATGATACAATCGGCTCTTCTAT
ATCATTGTACGACGCTGCAGCTCCTAGCTGACGGAATTGAAAGCAGTGAG
ATGGTCCTGCAATGTCGACAACGGGCAATCCTGGCTGCGCAGGAGATTAT
CCGATTGACAGAGGCAGTGCTCCAGCTGAATTATTTCGAGATTGCCCCAT
TCACACCGCTTCCCGTGCTTCTCTGCGCCAAAGTATTGATGATGTATCAA
GACGCGGATCCCTCATGTGCGCTTCAGCTGCAGGAAGTTCTAGGTATGGT
GCAGAATCTGGCAAATACTAACCATTTATGCCGGGAGTGGGCTATCCAAC
ACCGTGATCTGTTCGGATCCGAATCCGACTTTGTCCATATTGAGGAGGAG
AGCCATGGCTAGATGTCCAGCCCTTCGCCTTCAAGCGAACAACCCCAATC
TCGCAACCGCCCTGGCTCCGCATGCACGGAATGCCGTCGCCGCAAGATGC
GCTGTGATGGGAAACATCCTCAATGTAATAATTGTTCTAACGCGGGTATA
ATATGTGTTTTCAACCCCCAGCCTTCCCGTCGGGGTCCCAAAAAGGGACA
TTTGAAAAGCCTGCAGGTGCGTATCGCGAATCTCGAGAATACACTGTTTG
GACGGACACAGGATCCTCTGTCCACGGAGATTTCCACAGACGGTGACGCT
GCTGCGCAATCCGCAATGCATGGCTGGGAATCCCAGTTAAACATGCCCCT
TAATGAGTTCAACATTCCAGCGGGTGCACCAAAGTTGGGGACTGTACCGA
TTTCGGACTTATTACACGCCGAACTTGACCAGTTGTACTTTGATCGTGCA
CATATTTTCGTCCCCATTCTCAATGCACGGCGCTACCTTTCGTGGACCAG
GGATGATAGTAAATCCATATCGAGAACATGCTTGCAATACGCCATGTGGA
CGATAACTACGTCCAAGTCCGCCCAACTGGAACATCTCTGCGAACCACTC
TACCAGTCAGCCCGAGAGCTACTAGGATGTCTACAAGTAACAGCTGAAAA
TAGCAACATAGACCGGATAGAGCATGTTCAAGCATTACTGATACTTGCAG
TTTACGAATTTACCCACCATACCTTTCAGCGTGGGTGGATGAGCGCCGGT
CAGGGTATTCGACTTGTGCAGCTGATGAACTTGCACAAGATTGATCTCAA
CAAGGAGGGCAGAGCAGGACCCGACGAGGCGAGCGGGTTGGATGATCCCG
TTTGCACAGAGGAAAGGCGTCGTGTCTTTTGGATAGCATACATACTAGAC
CGGCTTATCTCCTTAAGACATGAGAGCCCATTGACCTTTGATGAGCGAGT
CATAGCGACACGGTTGCCCGCCAGAGAGGAGGCCTTCCAGATGGGTCAAT
TAAACCAGATGACTGGATTTCTCTCGAAGGCTATTACTGAAGATGGGCCT
CTCCCGAAAGCAGAACTTTCAGAAATGGTTATTCTAGCTACACTTTGCGG
AAGAACAGTATTACACCGGCAGCAGGCAGCCGCTGAGCAAGCCGACTGCG
GCATATCCAACAGCTTCTGGGAGCGACATCGCCGGCTAGACGCTATACTA
GTCAAGAAGGGTCAGGTTATTTCGACACTCCAGCCGGTGGCAACCATGAT
GCCTGCAGAGCTGGCTTCTCTTATCCCAAATCTGATGATACAATCGGCTC
TTCTATATCATTGTACGACGCTGCAGCTCCTAGCTGACGGAATTGAAAGC
AGTGAGATGGTCCTGCAATGTCGACAACGGGCAATCCTGGCTGCGCAGGA
GATTATCCGATTGACAGAGGCAGTGCTCCAGCTGAATTATTTCGAGATTG
CCCCATTCACACCGCTTCCCGTGCTTCTCTGCGCCAAAGTATTGATGATG
TATCAAGACGCGGATCCCTCATGTGCGCTTCAGCTGCAGGAAGTTCTAGG
TATGGTGCAGAATCTGGCAAATACTAACCATTTATGCCGGGAGTGGGCTA
TCCAACACCGTGATCTGTTCGGATCCGAATCCGACTTTGTCCATATTGAG
GAGGAGAGCCATGGCTAGATGTCCAGCCCTTCGCCTTCAAGCGAACAACC
CCAATCTCGCAACCGCCCTGGCTCCGCATGCACGGAATGCCGTCGCCGCA
AGATGCGCTGTGATGGGAAACATCCTCAATGTAATAATTGTTCTAACGCG
GGTATAATATGTGTTTTCAACCCCCAGCCTTCCCGTCGGGGTCCCAAAAA
GGGACATTTGAAAAGCCTGCAGGTGCGTATCGCGAATCTCGAGAATACAC
TGTTTGGACGGACACAGGATCCTCTGTCCACGGAGATTTCCACAGACGGT
GACGCTGCTGCGCAATCCGCAATGCATGGCTGGGAATCCCAGTTAAACAT
GCCCCTTAATGAGTTCAACATTCCAGCGGGTGCACCAAAGTTGGGGACTG
TACCGATTTCGGACTTATTACACGCCGAACTTGACCAGTTGTACTTTGAT
CGTGCACATATTTTCGTCCCCATTCTCAATGCACGGCGCTACCTTTCGTG
GACCAGGGATGATAGTAAATCCATATCGAGAACATGCTTGCAATACGCCA
TGTGGACGATAACTACGTCCAAGTCCGCCCAACTGGAACATCTCTGCGAA
CCACTCTACCAGTCAGCCCGAGAGCTACTAGGATGTCTACAAGTAACAGC
TGAAAATAGCAACATAGACCGGATAGAGCATGTTCAAGCATTACTGATAC
TTGCAGTTTACGAATTTACCCACCATACCTTTCAGCGTGGGTGGATGAGC
GCCGGTCAGGGTATTCGACTTGTGCAGCTGATGAACTTGCACAAGATTGA
TCTCAACAAGGAGGGCAGAGCAGGACCCGACGAGGCGAGCGGGTTGGATG
ATCCCGTTTGCACAGAGGAAAGGCGTCGTGTCTTTTGGATAGCATACATA
CTAGACCGGCTTATCTCCTTAAGACATGAGAGCCCATTGACCTTTGATGA
GCGAGTCATAGCGACACGGTTGCCCGCCAGAGAGGAGGCCTTCCAGATGG
GTCAATTAAACCAGATGACTGGATTTCTCTCGAAGGCTATTACTGAAGAT
GGGCCTCTCCCGAAAGCAGAACTTTCAGAAATGGTTATTCTAGCTACACT
TTGCGGAAGAACAGTATTACACCGGCAGCAGGCAGCCGCTGAGCAAGCCG
ACTGCGGCATATCCAACAGCTTCTGGGAGCGACATCGCCGGCTAGACGCT
ATACTAGTCAAGAAGGGTCAGGTTATTTCGACACTCCAGCCGGTGGCAAC
CATGATGCCTGCAGAGCTGGCTTCTCTTATCCCAAATCTGATGATACAAT
CGGCTCTTCTATATCATTGTACGACGCTGCAGCTCCTAGCTGACGGAATT
GAAAGCAGTGAGATGGTCCTGCAATGTCGACAACGGGCAATCCTGGCTGC
GCAGGAGATTATCCGATTGACAGAGGCAGTGCTCCAGCTGAATTATTTCG
AGATTGCCCCATTCACACCGCTTCCCGTGCTTCTCTGCGCCAAAGTATTG
ATGATGTATCAAGACGCGGATCCCTCATGTGCGCTTCAGCTGCAGGAAGT
TCTAGGTATGGTGCAGAATCTGGCAAATACTAACCATTTATGCCGGGAGT
GGGCTATCCAACACCGTGATCTGTTCGGATCCGAATCCGACTTTGTCCAT
ATTGAGGAGGAGAGCCATGGCTAGATGTCCAGCCCTTCGCCTTCAAGCGA
ACAACCCCAATCTCGCAACCGCCCTGGCTCCGCATGCACGGAATGCCGTC
GCCGCAAGATGCGCTGTGATGGGAAACATCCTCAATGTAATAATTGTTCT
AACGCGGGTATAATATGTGTTTTCAACCCCCAGCCTTCCCGTCGGGGTCC
CAAAAAGGGACATTTGAAAAGCCTGCAGGTGCGTATCGCGAATCTCGAGA
ATACACTGTTTGGACGGACACAGGATCCTCTGTCCACGGAGATTTCCACA
GACGGTGACGCTGCTGCGCAATCCGCAATGCATGGCTGGGAATCCCAGTT
AAACATGCCCCTTAATGAGTTCAACATTCCAGCGGGTGCACCAAAGTTGG
GGACTGTACCGATTTCGGACTTATTACACGCCGAACTTGACCAGTTGTAC
TTTGATCGTGCACATATTTTCGTCCCCATTCTCAATGCACGGCGCTACCT
TTCGTGGACCAGGGATGATAGTAAATCCATATCGAGAACATGCTTGCAAT
ACGCCATGTGGACGATAACTACGTCCAAGTCCGCCCAACTGGAACATCTC
TGCGAACCACTCTACCAGTCAGCCCGAGAGCTACTAGGATGTCTACAAGT
AACAGCTGAAAATAGCAACATAGACCGGATAGAGCATGTTCAAGCATTAC
TGATACTTGCAGTTTACGAATTTACCCACCATACCTTTCAGCGTGGGTGG
ATGAGCGCCGGTCAGGGTATTCGACTTGTGCAGCTGATGAACTTGCACAA
GATTGATCTCAACAAGGAGGGCAGAGCAGGACCCGACGAGGCGAGCGGGT
TGGATGATCCCGTTTGCACAGAGGAAAGGCGTCGTGTCTTTTGGATAGCA
TACATACTAGACCGGCTTATCTCCTTAAGACATGAGAGCCCATTGACCTT
TGATGAGCGAGTCATAGCGACACGGTTGCCCGCCAGAGAGGAGGCCTTCC
AGATGGGTCAATTAAACCAGATGACTGGATTTCTCTCGAAGGCTATTACT
GAAGATGGGCCTCTCCCGAAAGCAGAACTTTCAGAAATGGTTATTCTAGC
TACACTTTGCGGAAGAACAGTATTACACCGGCAGCAGGCAGCCGCTGAGC
AAGCCGACTGCGGCATATCCAACAGCTTCTGGGAGCGACATCGCCGGCTA
GACGCTATACTAGTCAAGAAGGGTCAGGTTATTTCGACACTCCAGCCGGT
GGCAACCATGATGCCTGCAGAGCTGGCTTCTCTTATCCCAAATCTGATGA
TACAATCGGCTCTTCTATATCATTGTACGACGCTGCAGCTCCTAGCTGAC
GGAATTGAAAGCAGTGAGATGGTCCTGCAATGTCGACAACGGGCAATCCT
GGCTGCGCAGGAGATTATCCGATTGACAGAGGCAGTGCTCCAGCTGAATT
ATTTCGAGATTGCCCCATTCACACCGCTTCCCGTGCTTCTCTGCGCCAAA
GTATTGATGATGTATCAAGACGCGGATCCCTCATGTGCGCTTCAGCTGCA
GGAAGTTCTAGGTATGGTGCAGAATCTGGCAAATACTAACCATTTATGCC
GGGAGTGGGCTATCCAACACCGTGATCTGTTCGGATCCGAATCCGACTTT
GTCCATATTGAGGAGGAGAGCCATGGCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
| GO:0042025 | host cell nucleus |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR007219 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2300850..2302708 + |
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