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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2303130..2304614+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000921-T1 ID=KJC3_000921-T1|Name=KJC3_000921-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1485bp|location=Sequence derived from alignment at ch1:2303130..2304614+ (Aspergillus niger KJC3)
ATGGCGAGCCAGAAGGTAGAGGTAGAGTTGTCTGATCGCTCACGGTCGGC
GGCTGAGCAGGAGCAGGTGGCACCCTTGCCACAGAATACGAATCAGGCTT
CCAGTAGCAGGAATGGGCCCGTTCCTGAGCCGGTTTATTCCCAATGGTAA
GACGCTCACGAAAAACAAAAAGCCTGGTGGTTCTGACATGACAGGCACTA
TGCCACCGTTGTGGCAGCTGGGTTCATCGTGATGATCACGACCTGCGCTT
TCGTGTTCTCGTTTGGAGTCTACCAATCCCTCTATGAAGAGATGGCCCGC
GAACCGAACACTCCTTTTACCGGAAGCACGACTGCGCTCATCGACCTGAT
CGGCACATTGGCCATCGCGCTTATGTCGATGGCCGGCCCTTTTGCCATGT
CCTGGGCGAAGCTCTTCTCCCCGCAAGCCGTGATCATCGCCGGCGGCTGG
GTGTTTGGTATCGCCTACATCCTCGCCAGTTTCAGCAAGGCTCTATGGCA
CTTTGCTCTGACACAGGGGCTGCTGTTGGGCATTGGCACCTGTATGGCCT
ACGTTCCCACCATGGCGGTCGCTCCAAGCTGGTTCACTAAACGTCGCGGC
CTCGCCATGGGAATTATCATCTCCGGGACCGGAGTGGGGGGCATGATCTG
GCCGCCTGCACTGCGGGCCATGATCTCCCACGTGGGCTTCCGCAACGCCC
TCCGCATATCAGGCTGCATCTCGCTGACGACCGTCACCGCCGCGGGCAGC
ATCCTCCGCTGGGAGCCCAAATTCCACGAGCAAGTCAAACTGCAAGCGGC
CGGAGCATCCCGCTCCTCCCGCGCCCGTCCCAAATGGATACAACTATTCT
CCGTTCCCCTCGTCAACTGGCGTGTAGCCCGGTCCAAACGCTTCACTGCA
CAAGCCCTAGGATGTTTTCTCCAATCCGCCGGCTACTCAACGCCGCTCTT
TTTCTACGCTGCATACGCCCAAGCGCTGGGATACAGCGCCACGACAGCAG
CCAACTTCATCACGCTGAGCAACGCATCGAACTTTGTTTCCCGCATCATC
ATCGGCTACGCAGCCGACAAGCTCGGCAGGATCAATGCTCTCGCCGCCAC
GACGCTGCTCAGCACCGTCGCCGTATTCGCATTCTGGCTGCCGTCATCGC
TGGTCTCGAGTGCCGCAGCGCATGGACTCTTCATCGTCTTCACGATCCTG
TATGGCGCCTTTGCTAGCGCGTATATCTCGCTGTTCCCCGCATCGCTAGT
GGAGCTCTTTGGCGTGCAGCATTTCACTAGCGTGAATGGGGCACTGTATC
TGGTCCGGGGGGTCGGGGCGTTGCTTGGCACGCCGCTGACGGGGCTGTTG
ATTCCGCGAGGCTCGGCCTTGACGGAGTCGGGGATTTACGAGCGGGCTGC
TATTACAGTAGGAGTGTTGTTGTTTGCCGCGACGGTGGCATGTTTCTGGG
TACGAGCCGAAGTCCATGGGAAGTGGCGAGTGTAG back to topCoding sequence (CDS) from alignment at ch1:2303130..2304614+ >KJC3_000921-T1 ID=KJC3_000921-T1|Name=KJC3_000921-T1|organism=Aspergillus niger KJC3|type=CDS|length=2874bp|location=Sequence derived from alignment at ch1:2303130..2304614+ (Aspergillus niger KJC3)
ATGGCGAGCCAGAAGGTAGAGGTAGAGTTGTCTGATCGCTCACGGTCGGC
GGCTGAGCAGGAGCAGGTGGCACCCTTGCCACAGAATACGAATCAGGCTT
CCAGTAGCAGGAATGGGCCCGTTCCTGAGCCGGTTTATTCCCAATGGCAC
TATGCCACCGTTGTGGCAGCTGGGTTCATCGTGATGATCACGACCTGCGC
TTTCGTGTTCTCGTTTGGAGTCTACCAATCCCTCTATGAAGAGATGGCCC
GCGAACCGAACACTCCTTTTACCGGAAGCACGACTGCGCTCATCGACCTG
ATCGGCACATTGGCCATCGCGCTTATGTCGATGGCCGGCCCTTTTGCCAT
GTCCTGGGCGAAGCTCTTCTCCCCGCAAGCCGTGATCATCGCCGGCGGCT
GGGTGTTTGGTATCGCCTACATCCTCGCCAGTTTCAGCAAGGCTCTATGG
CACTTTGCTCTGACACAGGGGCTGCTGTTGGGCATTGGCACCTGTATGGC
CTACGTTCCCACCATGGCGGTCGCTCCAAGCTGGTTCACTAAACGTCGCG
GCCTCGCCATGGGAATTATCATCTCCGGGACCGGAGTGGGGGGCATGATC
TGGCCGCCTGCACTGCGGGCCATGATCTCCCACGTGGGCTTCCGCAACGC
CCTCCGCATATCAGGCTGCATCTCGCTGACGACCGTCACCGCCGCGGGCA
GCATCCTCCGCTGGGAGCCCAAATTCCACGAGCAAGTCAAACTGCAAGCG
GCCGGAGCATCCCGCTCCTCCCGCGCCCGTCCCAAATGGATACAACTATT
CTCCGTTCCCCTCGTCAACTGGCGTGTAGCCCGGTCCAAACGCTTCACTG
CACAAGCCCTAGGATGTTTTCTCCAATCCGCCGGCTACTCAACGCCGCTC
TTTTTCTACGCTGCATACGCCCAAGCGCTGGGATACAGCGCCACGACAGC
AGCCAACTTCATCACGCTGAGCAACGCATCGAACTTTGTTTCCCGCATCA
TCATCGGCTACGCAGCCGACAAGCTCGGCAGGATCAATGCTCTCGCCGCC
ACGACGCTGCTCAGCACCGTCGCCGTATTCGCATTCTGGCTGCCGTCATC
GCTGGTCTCGAGTGCCGCAGCGCATGGACTCTTCATCGTCTTCACGATCC
TGTATGGCGCCTTTGCTAGCGCGTATATCTCGCTGTTCCCCGCATCGCTA
GTGGAGCTCTTTGGCGTGCAGCATTTCACTAGCGTGAATGGGGCACTGTA
TCTGGTCCGGGGGGTCGGGGCGTTGCTTGGCACGCCGCTGACGGGGCTGT
TGATTCCGCGAGGCTCGGCCTTGACGGAGTCGGGGATTTACGAGCGGGCT
GCTATTACAGTAGGAGTGTTGTTGTTTGCCGCGACGGTGGCATGTTTCTG
GGTACGAGCCGAAGTCCATGGGAAGTGGCGAGTGTAGATGGCGAGCCAGA
AGGTAGAGGTAGAGTTGTCTGATCGCTCACGGTCGGCGGCTGAGCAGGAG
CAGGTGGCACCCTTGCCACAGAATACGAATCAGGCTTCCAGTAGCAGGAA
TGGGCCCGTTCCTGAGCCGGTTTATTCCCAATGGCACTATGCCACCGTTG
TGGCAGCTGGGTTCATCGTGATGATCACGACCTGCGCTTTCGTGTTCTCG
TTTGGAGTCTACCAATCCCTCTATGAAGAGATGGCCCGCGAACCGAACAC
TCCTTTTACCGGAAGCACGACTGCGCTCATCGACCTGATCGGCACATTGG
CCATCGCGCTTATGTCGATGGCCGGCCCTTTTGCCATGTCCTGGGCGAAG
CTCTTCTCCCCGCAAGCCGTGATCATCGCCGGCGGCTGGGTGTTTGGTAT
CGCCTACATCCTCGCCAGTTTCAGCAAGGCTCTATGGCACTTTGCTCTGA
CACAGGGGCTGCTGTTGGGCATTGGCACCTGTATGGCCTACGTTCCCACC
ATGGCGGTCGCTCCAAGCTGGTTCACTAAACGTCGCGGCCTCGCCATGGG
AATTATCATCTCCGGGACCGGAGTGGGGGGCATGATCTGGCCGCCTGCAC
TGCGGGCCATGATCTCCCACGTGGGCTTCCGCAACGCCCTCCGCATATCA
GGCTGCATCTCGCTGACGACCGTCACCGCCGCGGGCAGCATCCTCCGCTG
GGAGCCCAAATTCCACGAGCAAGTCAAACTGCAAGCGGCCGGAGCATCCC
GCTCCTCCCGCGCCCGTCCCAAATGGATACAACTATTCTCCGTTCCCCTC
GTCAACTGGCGTGTAGCCCGGTCCAAACGCTTCACTGCACAAGCCCTAGG
ATGTTTTCTCCAATCCGCCGGCTACTCAACGCCGCTCTTTTTCTACGCTG
CATACGCCCAAGCGCTGGGATACAGCGCCACGACAGCAGCCAACTTCATC
ACGCTGAGCAACGCATCGAACTTTGTTTCCCGCATCATCATCGGCTACGC
AGCCGACAAGCTCGGCAGGATCAATGCTCTCGCCGCCACGACGCTGCTCA
GCACCGTCGCCGTATTCGCATTCTGGCTGCCGTCATCGCTGGTCTCGAGT
GCCGCAGCGCATGGACTCTTCATCGTCTTCACGATCCTGTATGGCGCCTT
TGCTAGCGCGTATATCTCGCTGTTCCCCGCATCGCTAGTGGAGCTCTTTG
GCGTGCAGCATTTCACTAGCGTGAATGGGGCACTGTATCTGGTCCGGGGG
GTCGGGGCGTTGCTTGGCACGCCGCTGACGGGGCTGTTGATTCCGCGAGG
CTCGGCCTTGACGGAGTCGGGGATTTACGAGCGGGCTGCTATTACAGTAG
GAGTGTTGTTGTTTGCCGCGACGGTGGCATGTTTCTGGGTACGAGCCGAA
GTCCATGGGAAGTGGCGAGTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2303130..2304614 + |
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