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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2321706..2323643+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000930-T1 ID=KJC3_000930-T1|Name=KJC3_000930-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1938bp|location=Sequence derived from alignment at ch1:2321706..2323643+ (Aspergillus niger KJC3)
CGACATCGCATATCTTTTATTGCTTGCAAAAAGCACAGTCTCCCACTATG
GCGCGTGTCCGCCTCGCCCCGCTCTCCACGCTCACTCAAACCCGCTACGT
CCTGCACCTCTCCGACGGCAAACGCCTCGTCCTCTTCCGCCTCCCCACTA
TCGAGACGCCGAAAACCAAAGACAAACCCCGAGCGCGCAATGACGCCAAC
GGCTGGTCCTACTACGCCATGGAAGCGGAATGTCCGCATGCAGGCGGCCC
GATGAAAGATTCCTCCATTGACATCGAAGATTCAGCATACATTGTGTCTT
GTCCATGGCATGCGTATGATTTCAACGTCGAGACGGGAGAGTCGAGTGTG
GGGATTAAGGCGTGCACGTTCCCTGTTGATGTGAGCGATGAGGATATGGT
GGTTGTGGAATATACCTCTGAGAAATTGGGAGAGGGAGTGGAGTTGGCGA
AGTTGGAGGCTGTGAGTGAGCAGATGAAGTTGAAGAAGAGTGTCAATGGT
GTGAATGGTACGACAACGACAAATGGAGCGGACGATAAGGCTGAAACTGC
GCCGATTCGGTATCTTGATGATAATGCAACGGTGTGTGAATGGTGCGCGC
ACATTCTGAACACCTCGAACCCGGAACATAAGATCGAGTTGACGGCGCAT
TTGTTCAAATTGTTCACGGAACGGGAGGGAACAGATAAGCCTATGGTTAT
TGGGGATAGGACCAATGTTGACCTTCCAGATTTACCGCCTAGGGATGGCG
TGAAGGATGTAAATCGGCAGGCAGTTCCGAAGCCGGGCAGAGGTGGTACG
CAAAAGAGCAGGATTAATATGTTGCATGCGCTGGCAAACATTGAACAATG
GGCGATCGATCTGGCGGTCGATATCTGTGTGCGGTTCGCGAAGTTTCAGA
CGAACTCGGCTGATGCGCTGGGTCTTCCTCGGGCGTTCTTCCACGACTGG
TTGAAGGTCGCTAACGACGAGGCGAAGCATTTCTCTCTCCTTCGGACCAG
GCTGGAGGAGCTTGGTTCGTATTTCGGTGCCCTTCCGGTCCACCATGGAC
TGTGGGACTCTGCGACCGTGACAGCCCATGATCTGCGCGCTCGGATCAGC
ATTATTGCGTTGGTGCATGAGGCGCGCGGTTTGGATGTGAATCCAGTGAC
GATCGATAAGTTCCGCAAGGCTGGAGATGGGGATAGTGTTGACACGCTGG
AGATTATCCACAATGATGAGATCACCCATGTCACGACAGGTCATCGCTGG
TTGACCTGGATTTGTGCCCAGGAGGAGACGGACCCTGTGCAGGTGTTCCG
GGGTAATGTGCAGAAGTATTTCCGTGGGCCGTTGAGGGAGCCGTTCAATA
CAGAGGCTAGACTGCAGGCTGGTCTGGATAAGAGATACTACGAGGATCTC
TCGGGGTACGAGGGAATTCAGCCTGCTTGATCGCTCCCTGACTCGCAGTT
CAATAATGGAAAGCAGTTCAGTCGCTTGATCCTCTGGAGTCAACTACTCC
TCCAGCAAAGATGGCGAACTGCACAGAGACCTTGTCAACCCATGCGCTTG
CTAGGACCCCTCCGCTGCCGGTGACCTGAGAATCATAGATGGTTGTCTGC
CTCAGTCATACCGTTGAATGAATGTTGCAGACACAATCAATGACAGGCAT
AGCACTTCGTCACTCTGAGAGATCTTGACAAGAACTGCACCTACCAGAGG
GCCAAAGCACTGTGACTTGGCAAGTAGTGTGATACTCAGGAGTGTTGTGC
TAACCGCACCCATAGCGAAGGCGCATGGTCCCAGGTACATAACTGTGGGA
CTCGTGCGTGGTCAATGGGACATCAGTTGTGTTCGCAGATGACAATATTT
CCAAAAACATGCTCTAGAACTAGAAAAGTTACGAAAGATACCCCACATAG
ACTAGACCAAAAGTTTCAAAAAATTTAACAATTATTCC back to topCoding sequence (CDS) from alignment at ch1:2321706..2323643+ >KJC3_000930-T1 ID=KJC3_000930-T1|Name=KJC3_000930-T1|organism=Aspergillus niger KJC3|type=CDS|length=1383bp|location=Sequence derived from alignment at ch1:2321706..2323643+ (Aspergillus niger KJC3)
ATGGCGCGTGTCCGCCTCGCCCCGCTCTCCACGCTCACTCAAACCCGCTA
CGTCCTGCACCTCTCCGACGGCAAACGCCTCGTCCTCTTCCGCCTCCCCA
CTATCGAGACGCCGAAAACCAAAGACAAACCCCGAGCGCGCAATGACGCC
AACGGCTGGTCCTACTACGCCATGGAAGCGGAATGTCCGCATGCAGGCGG
CCCGATGAAAGATTCCTCCATTGACATCGAAGATTCAGCATACATTGTGT
CTTGTCCATGGCATGCGTATGATTTCAACGTCGAGACGGGAGAGTCGAGT
GTGGGGATTAAGGCGTGCACGTTCCCTGTTGATGTGAGCGATGAGGATAT
GGTGGTTGTGGAATATACCTCTGAGAAATTGGGAGAGGGAGTGGAGTTGG
CGAAGTTGGAGGCTGTGAGTGAGCAGATGAAGTTGAAGAAGAGTGTCAAT
GGTGTGAATGGTACGACAACGACAAATGGAGCGGACGATAAGGCTGAAAC
TGCGCCGATTCGGTATCTTGATGATAATGCAACGGTGTGTGAATGGTGCG
CGCACATTCTGAACACCTCGAACCCGGAACATAAGATCGAGTTGACGGCG
CATTTGTTCAAATTGTTCACGGAACGGGAGGGAACAGATAAGCCTATGGT
TATTGGGGATAGGACCAATGTTGACCTTCCAGATTTACCGCCTAGGGATG
GCGTGAAGGATGTAAATCGGCAGGCAGTTCCGAAGCCGGGCAGAGGTGGT
ACGCAAAAGAGCAGGATTAATATGTTGCATGCGCTGGCAAACATTGAACA
ATGGGCGATCGATCTGGCGGTCGATATCTGTGTGCGGTTCGCGAAGTTTC
AGACGAACTCGGCTGATGCGCTGGGTCTTCCTCGGGCGTTCTTCCACGAC
TGGTTGAAGGTCGCTAACGACGAGGCGAAGCATTTCTCTCTCCTTCGGAC
CAGGCTGGAGGAGCTTGGTTCGTATTTCGGTGCCCTTCCGGTCCACCATG
GACTGTGGGACTCTGCGACCGTGACAGCCCATGATCTGCGCGCTCGGATC
AGCATTATTGCGTTGGTGCATGAGGCGCGCGGTTTGGATGTGAATCCAGT
GACGATCGATAAGTTCCGCAAGGCTGGAGATGGGGATAGTGTTGACACGC
TGGAGATTATCCACAATGATGAGATCACCCATGTCACGACAGGTCATCGC
TGGTTGACCTGGATTTGTGCCCAGGAGGAGACGGACCCTGTGCAGGTGTT
CCGGGGTAATGTGCAGAAGTATTTCCGTGGGCCGTTGAGGGAGCCGTTCA
ATACAGAGGCTAGACTGCAGGCTGGTCTGGATAAGAGATACTACGAGGAT
CTCTCGGGGTACGAGGGAATTCAGCCTGCTTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051537 | 2 iron, 2 sulfur cluster binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000930-T1.utr5p1 | KJC3_000930-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000930-T1.utr3p1 | KJC3_000930-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009078 |
| DBxref | InterPro:IPR007402 |
| DBxref | InterPro:IPR036922 |
| DBxref | InterPro:IPR017941 |
| DBxref | PFAM:PF00355 |
| DBxref | PFAM:PF04305 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2321706..2323643 + |
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