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KJC3_000939-T1, KJC3_000939-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000939-T1
Unique NameKJC3_000939-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2346611..2348159-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000939-T1 ID=KJC3_000939-T1|Name=KJC3_000939-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1549bp|location=Sequence derived from alignment at ch1:2346611..2348159- (Aspergillus niger KJC3)
CCATCTGGGATGTTCCTAACGCTCTGCGTGGCTTATTTGCTTAATCCTTG
GTTTCCTATCGGTGATCAATGCTACTGAGGGGACTGTTAAGTCAGCCATG
CCACCTCAAACCCGAGCGATTCAACATAGCGAAAGTGTGGGGGAGAAAAA
GCGGAAACCTCTGCGCCGTGACCCGGAGAAGAGGCGGCAACAGAACATTC
AAGCCCAACGCAGATACCGTAAGTGCGGGTCTCATTTGGAGTCACCACAT
CGGAGATTAGCTAGCAAAAGTAATTACTAATTACGTACTCGTTTAGGAGA
AAAGCTTCGTGAGCGCTTAGGTCGCCTCGAAGCGCTGGCAGAGTCTGCGG
GACAGACCCCGGCCATTAAAAGCACCCCAGCTGCTGGCATACAACCAAGT
GGGGCGATCACAGCGTCTGGCCTACCCAACACTTCAAGTAGTATCGTTCC
AAAGACCCTTCCACTCTATGATGCTTCGGATGTATCGGTTCCGTCAACAT
CTGTGGCCACTCTTGGTAATTGCCAGCAACTTATCCCAGCTTCAGCTGAG
AGTCCATCGGCACTATACACATCAGATTCCACCATAACACCCTATCTATA
TTCTGATGAATCTCCCTCAGCCCTAACTGTGTGGGACCCTCCATCATGTG
TCGATCCCTCTCTTCTCGTTAGCGATAAGCCCAGTGACAGCCTGGAGTTG
TACTGGACAACCACCATTGACTGCGGCTGTACCAGCCCGCATTTCCGAAT
ACAGACAGAATGTCCAGACCTTCTCGGCCATAATGAAGTCAGAGTATTCA
GATTTGGCACGAATACAACTACAGCCGATCCATATACCAACAGTCTTCGC
ATCGACAGAGTTTGCACCATCGCTGCAATTCTTGATCTTGTCAGGCATGT
GGGTGTTACAGAGGAAGCGTTATGTGCTGACGAATCCCTCTCGCCATTCT
TTCGGCCCACTGCGGTGATGGTAGACGAGGCAGCCAAGAGGAATCTGATC
CGCACAGTACAGGAAACTTTCAAGTCTCTAAAGCCAGATCTGAGGCCATT
CCAAGAACAAATTACTATTGAGCACCATCCGATGATAGACATTCTACCAT
TCCGAACGCTACGAAGGAACCTCATCACTCGCCAGCACGATATAGATGAG
GATGAGTTCTTCGACGATATGCTTTCTGGCTTAGTGTGCTGGGGAGGTGC
GGGCATTGGGAAGAGGGATCGGCAAGTCTCCACTGGGTATGCTTCGACTG
GTACGCCGTGGGATGTCCGTAGTTGGGAAGCAAAGGTATGGTTCTTGAAG
AAGTATTGGTCTCTTTTGGGTGGCGAAGATGGTGAACTTGTACGACAAAG
TGAATGGTGGCGCAGTATTAGGGGAGACGACATTGAGCAGGAGAATATGT
GGTTAGGATAGGAGATATCTATGTGACATGTAAGCGCTCTGCGTGTTATA
GATGAAATATGCTTCAGACTTCCGTCAGGTAAAGATGGTTGGCCAGAATC
CGCCTCTCCCTCAACCAAACTCGTTAGTCTTATAGTCTGGTTATTGAAC
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Coding sequence (CDS) from alignment at ch1:2346611..2348159-

>KJC3_000939-T1 ID=KJC3_000939-T1|Name=KJC3_000939-T1|organism=Aspergillus niger KJC3|type=CDS|length=2472bp|location=Sequence derived from alignment at ch1:2346611..2348159- (Aspergillus niger KJC3)
GAGAAAAGCTTCGTGAGCGCTTAGGTCGCCTCGAAGCGCTGGCAGAGTCT
GCGGGACAGACCCCGGCCATTAAAAGCACCCCAGCTGCTGGCATACAACC
AAGTGGGGCGATCACAGCGTCTGGCCTACCCAACACTTCAAGTAGTATCG
TTCCAAAGACCCTTCCACTCTATGATGCTTCGGATGTATCGGTTCCGTCA
ACATCTGTGGCCACTCTTGGTAATTGCCAGCAACTTATCCCAGCTTCAGC
TGAGAGTCCATCGGCACTATACACATCAGATTCCACCATAACACCCTATC
TATATTCTGATGAATCTCCCTCAGCCCTAACTGTGTGGGACCCTCCATCA
TGTGTCGATCCCTCTCTTCTCGTTAGCGATAAGCCCAGTGACAGCCTGGA
GTTGTACTGGACAACCACCATTGACTGCGGCTGTACCAGCCCGCATTTCC
GAATACAGACAGAATGTCCAGACCTTCTCGGCCATAATGAAGTCAGAGTA
TTCAGATTTGGCACGAATACAACTACAGCCGATCCATATACCAACAGTCT
TCGCATCGACAGAGTTTGCACCATCGCTGCAATTCTTGATCTTGTCAGGC
ATGTGGGTGTTACAGAGGAAGCGTTATGTGCTGACGAATCCCTCTCGCCA
TTCTTTCGGCCCACTGCGGTGATGGTAGACGAGGCAGCCAAGAGGAATCT
GATCCGCACAGTACAGGAAACTTTCAAGTCTCTAAAGCCAGATCTGAGGC
CATTCCAAGAACAAATTACTATTGAGCACCATCCGATGATAGACATTCTA
CCATTCCGAACGCTACGAAGGAACCTCATCACTCGCCAGCACGATATAGA
TGAGGATGAGTTCTTCGACGATATGCTTTCTGGCTTAGTGTGCTGGGGAG
GTGCGGGCATTGGGAAGAGGGATCGGCAAGTCTCCACTGGGTATGCTTCG
ACTGGTACGCCGTGGGATGTCCGTAGTTGGGAAGCAAAGGTATGGTTCTT
GAAGAAGTATTGGTCTCTTTTGGGTGGCGAAGATGGTGAACTTGTACGAC
AAAGTGAATGGTGGCGCAGTATTAGGGGAGACGACATTGAGCAGGAGAAT
ATGTGGTTAGGATAGATGCCACCTCAAACCCGAGCGATTCAACATAGCGA
AAGTGTGGGGGAGAAAAAGCGGAAACCTCTGCGCCGTGACCCGGAGAAGA
GGCGGCAACAGAACATTCAAGCCCAACGCAGATACCGAGAAAAGCTTCGT
GAGCGCTTAGGTCGCCTCGAAGCGCTGGCAGAGTCTGCGGGACAGACCCC
GGCCATTAAAAGCACCCCAGCTGCTGGCATACAACCAAGTGGGGCGATCA
CAGCGTCTGGCCTACCCAACACTTCAAGTAGTATCGTTCCAAAGACCCTT
CCACTCTATGATGCTTCGGATGTATCGGTTCCGTCAACATCTGTGGCCAC
TCTTGGTAATTGCCAGCAACTTATCCCAGCTTCAGCTGAGAGTCCATCGG
CACTATACACATCAGATTCCACCATAACACCCTATCTATATTCTGATGAA
TCTCCCTCAGCCCTAACTGTGTGGGACCCTCCATCATGTGTCGATCCCTC
TCTTCTCGTTAGCGATAAGCCCAGTGACAGCCTGGAGTTGTACTGGACAA
CCACCATTGACTGCGGCTGTACCAGCCCGCATTTCCGAATACAGACAGAA
TGTCCAGACCTTCTCGGCCATAATGAAGTCAGAGTATTCAGATTTGGCAC
GAATACAACTACAGCCGATCCATATACCAACAGTCTTCGCATCGACAGAG
TTTGCACCATCGCTGCAATTCTTGATCTTGTCAGGCATGTGGGTGTTACA
GAGGAAGCGTTATGTGCTGACGAATCCCTCTCGCCATTCTTTCGGCCCAC
TGCGGTGATGGTAGACGAGGCAGCCAAGAGGAATCTGATCCGCACAGTAC
AGGAAACTTTCAAGTCTCTAAAGCCAGATCTGAGGCCATTCCAAGAACAA
ATTACTATTGAGCACCATCCGATGATAGACATTCTACCATTCCGAACGCT
ACGAAGGAACCTCATCACTCGCCAGCACGATATAGATGAGGATGAGTTCT
TCGACGATATGCTTTCTGGCTTAGTGTGCTGGGGAGGTGCGGGCATTGGG
AAGAGGGATCGGCAAGTCTCCACTGGGTATGCTTCGACTGGTACGCCGTG
GGATGTCCGTAGTTGGGAAGCAAAGGTATGGTTCTTGAAGAAGTATTGGT
CTCTTTTGGGTGGCGAAGATGGTGAACTTGTACGACAAAGTGAATGGTGG
CGCAGTATTAGGGGAGACGACATTGAGCAGGAGAATATGTGGTTAGGATA
GATGCCACCTCAAACCCGAGCGATTCAACATAGCGAAAGTGTGGGGGAGA
AAAAGCGGAAACCTCTGCGCCGTGACCCGGAGAAGAGGCGGCAACAGAAC
ATTCAAGCCCAACGCAGATACC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0007623circadian rhythm
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000939KJC3_000939Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000939-T1KJC3_000939-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000939-T1.cdsKJC3_000939-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000939-T1.utr3p1KJC3_000939-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000939-T1.exon2KJC3_000939-T1.exon2Aspergillus niger KJC3exon
KJC3_000939-T1.exon1KJC3_000939-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000939-T1.utr5p1KJC3_000939-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_1.10
NoteantiSMASH:Cluster_1.11
DBxrefInterPro:IPR020844
DBxrefInterPro:IPR004827
DBxrefInterPro:IPR021833
DBxrefPFAM:PF11905
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2346611..2348159 -
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