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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2350907..2354329+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000941-T1 ID=KJC3_000941-T1|Name=KJC3_000941-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3423bp|location=Sequence derived from alignment at ch1:2350907..2354329+ (Aspergillus niger KJC3)
CCTGTAGTCCACCACTACGTATGACTTCATTGTACCTAATCTTGTTCATC
ATTCGATCATCAGCTATGACAAAGTTCAGACCGTTCGGGCAAAGTCTCAT
CGGCTCTGTTCGTCCTGGATCGGCCCAGGCTACTTCCATCGGCCGATTCT
GAACAGACTAGATGCGTGCCTGGCCATTTGTGAAGCATCTACTGTTCCTG
ACATGCATGGTCTGTGGAGTCTTTCCATGAATCTATGTTAACTGCTGACC
GTGGATCACAGATATGAAGAATATAGGGAAGAGACGCTGACTGCAAAAGC
CTAGACCGGACCGTTGGAACCAGATGCGTCATCGACTCTGTTCTCGGCCA
GATAAGGTTACATATGCCTCGCCGGCCACGCCAACAGGTCCTACTCAGAA
TCTAGCCTTCCATGACGTCGGGCCGATGTGAAAAGCAAGCTTTGCCTCAG
TGGCGGGTTTATTCACTCGTTGGATCTGGCTTCTATTGTTAGGCAGAGCA
TGCTCGACAATACTCTTGTCGACTGTCCTCTTCATTCTAAAAAGGACAAA
CTCGCTAAGCGGGGCCGGTGTATTCAATGGGGGTGTCCTGAGCGACTTTT
CCCACTCGGCTTGAAGGGAGAGTCGCCTTTCTCGCTGAATGGTGAATCGC
ACACTGCGGAGACATTCCGTACCCTCTGGTGTTGGATGCCTTTGATAGGC
CAACAGAGACACTGAAATCCGATTCTCATCACTCTTACTTTGACAACACA
GCCTTCTGTACCTGCATAACACCGGGTAGCTTGAATAATGTCCGAAGGAA
GGCGCAGCAACGAATCAAGCTCAAGCTCCTTGATCAGTTATCACAGTGTC
GAGAGACCGAATGCAGACTCCGACGCTGAAAAAAGACATGATCTCACCCC
CGACAGCGACTCATCACCAAGCGGTCCTCGTACTCATCGAGTTCACTTCG
GGGCGGATCGCAGGTTTGAATATGGGGACTGGGATACAGATGAACGAGTT
CTCTCTCCCGGTACATCTCGCCTTCGACGCCGTTCGTCTACTCAAGCGTC
AGTAGACATCACCGATTCATCCCACAGAGGTCCACCATCTACTAGTACAA
ATGGCAGGGACGAAGAAAATGAGAAAAAGCAGCAACACACGACGACGACT
GAGAAAAGATCCAGACGTGAACGCCTGAAAGCATTCAAAGATTCGATCAA
AGAGAAAGCAGCGAACCTTGCTGCTCGTCTCGGTCGTCCAGATGATATCA
ACGAAGACGACCTACAGCCCATCGACCATCGACGTCGCAACACTGAACCT
GATCTGTATCTCAGAGAAGAAGATCAAAACCAAACCTGTAGTACCGAGGC
GCATCGGATCGTTCGTGAACTAGCACATGAAGCATCCGGCCGTCGTCCGA
GTGCCCGTAGGGACTCGGCTTTGCATCGTGCTGCTGGGGTTTCTGCCCAA
GATGATGATTCTGGAAATGAAGCGATACCTCGCCGAAGTTCTAGATCGGG
AGGCGTTCTATCTCAACTGCTCAGACTTAGCGGGGGCTGGGACCAATTCC
AGAAAGGAGCGCGCGGGCTCCACCTAGCCAGTGACACGTTCTACCCTTTC
GGTGGAAGCACCCCAGGCACCACGACTCCGCGAAAGGAGAAAGTACGATG
GTACAAGAAGCATGGTAACGTTTCAGCATCAACCTTAGTCGGAGGTGGCA
GTGCTAGCGGTGCAAGCACCCCTGTTACCGGTGAACTTTTAAGCGCTGCA
TCCAGACGACGTGACAAGAGCCGAAGGCATAGCATGAGACTCGAGGAGGA
GATTCAGGTTACCTTACAGATTGCCGAGATCATTGCTCGACAGAGGTATA
TCATGCAACTGTGCAAGGCATTAATGAGATTTGGGGCTCCAACTCATCGC
TTAGAGGAGTACATGCGCATGACAGCCAGAGTTCTGGACGTTGACAGCCA
GTTTCTCTATGTGCCCGGATGCATGATCATGTCTTTCGATGACTCCAGCA
CCCGGACCACCGAAGTCAAACTAGTCCGCGTCGTTCAAGGCGTTGATCTG
GGACGATTGGCAGATACCCACAACGTATACAAGAACGTCATACACGACAT
GATAGGGATCGAAGAAGCCGGAAACGAATTGGAAGAGCTAATGGCAAAGA
AGCCCCGCTTCAACCGATACTTCATCGTTTTAATCTACGGCCTAGCCACT
GCGATGGTAGGCCCATTCGCATTCGACGCACGACCAATCGACATGCCAAT
AATCTTCTTCAACGGCTGTCTCCTAGGCTGCATGCAGCACATCCTCGCAC
CACGATCAGTCCTATACTCCAATGTATTCGAAGTGACCGCCGCCGTTCTC
ACTTCCTTCCTCGCCCGCGCCTTCGGCAGTATCCGATCATCCGCATTCAC
CAACGGATCCAACGACTACATATTCTGCTTCTCCGCAATCGCCCAGTCCT
CCATCGCACTAATCCTCCCCGGCTACACCGTCCTCTGCAGCAGCCTGGAA
CTCCAATCCCAACAAATCGTTGCCGGTTCCATCCGCATGGTCTACGCCAT
CATATACTCCCTCTTCCTCGGCTACGGCGTCACAGTCGGCACGACCATCT
ACGGGCTCATCGACAAGAACGCAACCTCAAACCTAAGCTGCCCGACAAGC
GGAGGCTTCGGCAACGCCTACGCACAACGTTTCCCCTTCGTCGCCGCCTT
CTCCCTCTGCCTCTTAATCGTCAACCAAGGCAAATGGAAACAATCGCCCA
TCATGATCGCCATCTCCGTAGCCGGCTACGTTACCAACTACTTCGTCAGC
TCGCGTCTAGGCAACAACTCCCAAGTAGCCAACACCGTCGGGGCCTTCAC
TGTGGGAGTCATGGGCAACCTCTACAGTCGACTCTGGCACGGACACGCTG
CAGCAGCTATCTTACCCGCGATATTCGTCCTCGTGCCCTCCGGTCTAGCT
GCAACAGGAAACCTTATCACAGGCGTCGACACAGCCGATGAGATCAGATC
AAATGTCACGAAAAATGCAACGGGAAGTGGGACCACGTCTAGCTCGTCAT
CGAGCAACATGTCAACGAATATTCTGGGGTTTGGAATGATCCAAGTTGCC
ATTGGGATTACTGTTGGGTTGTTTGTCGCTGCCTTGGTTGTTTATCCTCT
TGGAAAGCGGAGAAGCGGACTTTTCAGCTTCTAAATGGAGTGGTTTCTTG
AATCGCATTTAAATAATTTGCAGCGTACATATTTGGTCGCCTCGAGTCTT
TGCATGCATCTGGAGGGAAAACGGAATTTGCATTAGAGCGGGCGAGATTT
TAGTTTGAAGAAAAGCAGCGAGCGTCGAAATTGGTTACAGCATCTCGCAT
GTCAGCCAGGTATTGTTACATATCTTTCTAATAGAGCAACTGAACTAGAA
GCCGAATGACATAATTACGAGAC back to topCoding sequence (CDS) from alignment at ch1:2350907..2354329+ >KJC3_000941-T1 ID=KJC3_000941-T1|Name=KJC3_000941-T1|organism=Aspergillus niger KJC3|type=CDS|length=2397bp|location=Sequence derived from alignment at ch1:2350907..2354329+ (Aspergillus niger KJC3)
ATGTCCGAAGGAAGGCGCAGCAACGAATCAAGCTCAAGCTCCTTGATCAG
TTATCACAGTGTCGAGAGACCGAATGCAGACTCCGACGCTGAAAAAAGAC
ATGATCTCACCCCCGACAGCGACTCATCACCAAGCGGTCCTCGTACTCAT
CGAGTTCACTTCGGGGCGGATCGCAGGTTTGAATATGGGGACTGGGATAC
AGATGAACGAGTTCTCTCTCCCGGTACATCTCGCCTTCGACGCCGTTCGT
CTACTCAAGCGTCAGTAGACATCACCGATTCATCCCACAGAGGTCCACCA
TCTACTAGTACAAATGGCAGGGACGAAGAAAATGAGAAAAAGCAGCAACA
CACGACGACGACTGAGAAAAGATCCAGACGTGAACGCCTGAAAGCATTCA
AAGATTCGATCAAAGAGAAAGCAGCGAACCTTGCTGCTCGTCTCGGTCGT
CCAGATGATATCAACGAAGACGACCTACAGCCCATCGACCATCGACGTCG
CAACACTGAACCTGATCTGTATCTCAGAGAAGAAGATCAAAACCAAACCT
GTAGTACCGAGGCGCATCGGATCGTTCGTGAACTAGCACATGAAGCATCC
GGCCGTCGTCCGAGTGCCCGTAGGGACTCGGCTTTGCATCGTGCTGCTGG
GGTTTCTGCCCAAGATGATGATTCTGGAAATGAAGCGATACCTCGCCGAA
GTTCTAGATCGGGAGGCGTTCTATCTCAACTGCTCAGACTTAGCGGGGGC
TGGGACCAATTCCAGAAAGGAGCGCGCGGGCTCCACCTAGCCAGTGACAC
GTTCTACCCTTTCGGTGGAAGCACCCCAGGCACCACGACTCCGCGAAAGG
AGAAAGTACGATGGTACAAGAAGCATGGTAACGTTTCAGCATCAACCTTA
GTCGGAGGTGGCAGTGCTAGCGGTGCAAGCACCCCTGTTACCGGTGAACT
TTTAAGCGCTGCATCCAGACGACGTGACAAGAGCCGAAGGCATAGCATGA
GACTCGAGGAGGAGATTCAGGTTACCTTACAGATTGCCGAGATCATTGCT
CGACAGAGGTATATCATGCAACTGTGCAAGGCATTAATGAGATTTGGGGC
TCCAACTCATCGCTTAGAGGAGTACATGCGCATGACAGCCAGAGTTCTGG
ACGTTGACAGCCAGTTTCTCTATGTGCCCGGATGCATGATCATGTCTTTC
GATGACTCCAGCACCCGGACCACCGAAGTCAAACTAGTCCGCGTCGTTCA
AGGCGTTGATCTGGGACGATTGGCAGATACCCACAACGTATACAAGAACG
TCATACACGACATGATAGGGATCGAAGAAGCCGGAAACGAATTGGAAGAG
CTAATGGCAAAGAAGCCCCGCTTCAACCGATACTTCATCGTTTTAATCTA
CGGCCTAGCCACTGCGATGGTAGGCCCATTCGCATTCGACGCACGACCAA
TCGACATGCCAATAATCTTCTTCAACGGCTGTCTCCTAGGCTGCATGCAG
CACATCCTCGCACCACGATCAGTCCTATACTCCAATGTATTCGAAGTGAC
CGCCGCCGTTCTCACTTCCTTCCTCGCCCGCGCCTTCGGCAGTATCCGAT
CATCCGCATTCACCAACGGATCCAACGACTACATATTCTGCTTCTCCGCA
ATCGCCCAGTCCTCCATCGCACTAATCCTCCCCGGCTACACCGTCCTCTG
CAGCAGCCTGGAACTCCAATCCCAACAAATCGTTGCCGGTTCCATCCGCA
TGGTCTACGCCATCATATACTCCCTCTTCCTCGGCTACGGCGTCACAGTC
GGCACGACCATCTACGGGCTCATCGACAAGAACGCAACCTCAAACCTAAG
CTGCCCGACAAGCGGAGGCTTCGGCAACGCCTACGCACAACGTTTCCCCT
TCGTCGCCGCCTTCTCCCTCTGCCTCTTAATCGTCAACCAAGGCAAATGG
AAACAATCGCCCATCATGATCGCCATCTCCGTAGCCGGCTACGTTACCAA
CTACTTCGTCAGCTCGCGTCTAGGCAACAACTCCCAAGTAGCCAACACCG
TCGGGGCCTTCACTGTGGGAGTCATGGGCAACCTCTACAGTCGACTCTGG
CACGGACACGCTGCAGCAGCTATCTTACCCGCGATATTCGTCCTCGTGCC
CTCCGGTCTAGCTGCAACAGGAAACCTTATCACAGGCGTCGACACAGCCG
ATGAGATCAGATCAAATGTCACGAAAAATGCAACGGGAAGTGGGACCACG
TCTAGCTCGTCATCGAGCAACATGTCAACGAATATTCTGGGGTTTGGAAT
GATCCAAGTTGCCATTGGGATTACTGTTGGGTTGTTTGTCGCTGCCTTGG
TTGTTTATCCTCTTGGAAAGCGGAGAAGCGGACTTTTCAGCTTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000941-T1.utr3p1 | KJC3_000941-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.10 |
| Note | antiSMASH:Cluster_1.11 |
| DBxref | InterPro:IPR024528 |
| DBxref | InterPro:IPR010619 |
| DBxref | PFAM:PF12821 |
| DBxref | PFAM:PF06738 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2350907..2354329 + |
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