|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2372881..2374323+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000945-T1 ID=KJC3_000945-T1|Name=KJC3_000945-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1443bp|location=Sequence derived from alignment at ch1:2372881..2374323+ (Aspergillus niger KJC3)
ATGGACAAGCTTGAAAGACTACGACCAGCCGGTCAGTGCAAAAATATTAA
TTGATTGGAAAAAGATACATGGATTGACAAACGTCCAACAGGGCACCTAG
AGAAATTCTTCCTCGCACGCGGTCTGGCTGGGCACTCCAACGTGGCAGTA
TCGGCAACCTATGTCCTGCCAAATACTTTCACCCGGCCCTTAAAGGAATA
TGCATATAGAGCATGTGAGACAGTGATCACCAAGAACCCTATTCTATCAG
CAATCCCGGTAAAAGACAGCCATGATACCTGGTTCTTCCGGCTCCCGGGA
ATCGACCTGACCCAATCCGTATCATTTCAAAGGCGTGGCCACGATTATCC
TACTGAAGATCAACCAGACATTGAACTATGTAATCTGCTGCAAGTTCAGC
AGAAATCCGAGTTCACAGCGCCTCTGCCATTCTGGAGACTGATCATCTTA
ACAGAGCCGACTGAGCGGCGCTTTACAGCGGTATATATATTCCACCATGC
AATCGGCGACGGGATATCAGGGAAGGCTTTCCACGAGACATTTAGAGAGG
CTTTACATGATGCTGCCGCTTACTTGGCCCAGGGAGGAATCACAAGACAA
GTGATTCCATCACCTAAGGTCCCTCTGCTGCCTAGTCTGGAAGCGCTCCA
TCCGTGCTCTATAAGTTTTACTTTCCTCCTGAAAAAGGTGCTCCAGATCA
AACTATGGCCCTATCGTGATCCGGGTCTCTGGACAGGACCGAAGTCATAC
ACACCAGTTGATATTGAAATCCGCCAAATTGTTATTTCAGAAACAATATC
TACAACCCTGAGAAAGAAATGTCGTCAAAATCATGCGACTATCACCTCGG
CCCTACACACAGCCGTTGCACGCAGCCTACTTGCGCATCTGCCAGAAGAG
TACACCAGATTGCAAGCTATTGGCGCGATGTCGACTCGCCGGTGGCTGAA
GGAAGAAGGGGGAGTTACGGATCAATCAATGGGTGTTTGGGTCATGGACT
TCAAGGAAAGCTTCTTCCGGGAGGAGATGGACCAGCATCCTCCTGACAGC
TTTCTGTGGGGAGTTGCAAGGAAATCCTGCACAACAATTAAAGAGGTGCT
CAGTCGCAAGGGCAAGGATTCCAGTGTGGGCTTGCTCAGATACCTGGATG
GTCATGGCTTTATACGGGGTAAGATAGGGAAGGACCGAGATGGGAGCTTC
AAAGCTTCGAATTTGGGGGTTTTGGAAGCCGGCCAGGAACGTGTTTCGTG
GCCGCAGATTGGACGGATGATGTTCGCTCAGCCGTTTGATGGTGTGAGTG
CACCGCTGGCCGTGTCTTCGATCACAGGCGGAGATGGCTGTTTAGTTGTA
ACTATTACATGGCAAAAAGGCCTTGCAGATTCAACGATGTTTGATGGTGT
TGTTGATATGATTGCTAGGGAGTTGCGTCATGCTGCGCGGTGA back to topCoding sequence (CDS) from alignment at ch1:2372881..2374323+ >KJC3_000945-T1 ID=KJC3_000945-T1|Name=KJC3_000945-T1|organism=Aspergillus niger KJC3|type=CDS|length=2766bp|location=Sequence derived from alignment at ch1:2372881..2374323+ (Aspergillus niger KJC3)
ATGGACAAGCTTGAAAGACTACGACCAGCCGGGCACCTAGAGAAATTCTT
CCTCGCACGCGGTCTGGCTGGGCACTCCAACGTGGCAGTATCGGCAACCT
ATGTCCTGCCAAATACTTTCACCCGGCCCTTAAAGGAATATGCATATAGA
GCATGTGAGACAGTGATCACCAAGAACCCTATTCTATCAGCAATCCCGGT
AAAAGACAGCCATGATACCTGGTTCTTCCGGCTCCCGGGAATCGACCTGA
CCCAATCCGTATCATTTCAAAGGCGTGGCCACGATTATCCTACTGAAGAT
CAACCAGACATTGAACTATGTAATCTGCTGCAAGTTCAGCAGAAATCCGA
GTTCACAGCGCCTCTGCCATTCTGGAGACTGATCATCTTAACAGAGCCGA
CTGAGCGGCGCTTTACAGCGGTATATATATTCCACCATGCAATCGGCGAC
GGGATATCAGGGAAGGCTTTCCACGAGACATTTAGAGAGGCTTTACATGA
TGCTGCCGCTTACTTGGCCCAGGGAGGAATCACAAGACAAGTGATTCCAT
CACCTAAGGTCCCTCTGCTGCCTAGTCTGGAAGCGCTCCATCCGTGCTCT
ATAAGTTTTACTTTCCTCCTGAAAAAGGTGCTCCAGATCAAACTATGGCC
CTATCGTGATCCGGGTCTCTGGACAGGACCGAAGTCATACACACCAGTTG
ATATTGAAATCCGCCAAATTGTTATTTCAGAAACAATATCTACAACCCTG
AGAAAGAAATGTCGTCAAAATCATGCGACTATCACCTCGGCCCTACACAC
AGCCGTTGCACGCAGCCTACTTGCGCATCTGCCAGAAGAGTACACCAGAT
TGCAAGCTATTGGCGCGATGTCGACTCGCCGGTGGCTGAAGGAAGAAGGG
GGAGTTACGGATCAATCAATGGGTGTTTGGGTCATGGACTTCAAGGAAAG
CTTCTTCCGGGAGGAGATGGACCAGCATCCTCCTGACAGCTTTCTGTGGG
GAGTTGCAAGGAAATCCTGCACAACAATTAAAGAGGTGCTCAGTCGCAAG
GGCAAGGATTCCAGTGTGGGCTTGCTCAGATACCTGGATGGTCATGGCTT
TATACGGGGTAAGATAGGGAAGGACCGAGATGGGAGCTTCAAAGCTTCGA
ATTTGGGGGTTTTGGAAGCCGGCCAGGAACGTGTTTCGTGGCCGCAGATT
GGACGGATGATGTTCGCTCAGCCGTTTGATGGTGTGAGTGCACCGCTGGC
CGTGTCTTCGATCACAGGCGGAGATGGCTGTTTAGTTGTAACTATTACAT
GGCAAAAAGGCCTTGCAGATTCAACGATGTTTGATGGTGTTGTTGATATG
ATTGCTAGGGAGTTGCGTCATGCTGCGCGGTGAATGGACAAGCTTGAAAG
ACTACGACCAGCCGGGCACCTAGAGAAATTCTTCCTCGCACGCGGTCTGG
CTGGGCACTCCAACGTGGCAGTATCGGCAACCTATGTCCTGCCAAATACT
TTCACCCGGCCCTTAAAGGAATATGCATATAGAGCATGTGAGACAGTGAT
CACCAAGAACCCTATTCTATCAGCAATCCCGGTAAAAGACAGCCATGATA
CCTGGTTCTTCCGGCTCCCGGGAATCGACCTGACCCAATCCGTATCATTT
CAAAGGCGTGGCCACGATTATCCTACTGAAGATCAACCAGACATTGAACT
ATGTAATCTGCTGCAAGTTCAGCAGAAATCCGAGTTCACAGCGCCTCTGC
CATTCTGGAGACTGATCATCTTAACAGAGCCGACTGAGCGGCGCTTTACA
GCGGTATATATATTCCACCATGCAATCGGCGACGGGATATCAGGGAAGGC
TTTCCACGAGACATTTAGAGAGGCTTTACATGATGCTGCCGCTTACTTGG
CCCAGGGAGGAATCACAAGACAAGTGATTCCATCACCTAAGGTCCCTCTG
CTGCCTAGTCTGGAAGCGCTCCATCCGTGCTCTATAAGTTTTACTTTCCT
CCTGAAAAAGGTGCTCCAGATCAAACTATGGCCCTATCGTGATCCGGGTC
TCTGGACAGGACCGAAGTCATACACACCAGTTGATATTGAAATCCGCCAA
ATTGTTATTTCAGAAACAATATCTACAACCCTGAGAAAGAAATGTCGTCA
AAATCATGCGACTATCACCTCGGCCCTACACACAGCCGTTGCACGCAGCC
TACTTGCGCATCTGCCAGAAGAGTACACCAGATTGCAAGCTATTGGCGCG
ATGTCGACTCGCCGGTGGCTGAAGGAAGAAGGGGGAGTTACGGATCAATC
AATGGGTGTTTGGGTCATGGACTTCAAGGAAAGCTTCTTCCGGGAGGAGA
TGGACCAGCATCCTCCTGACAGCTTTCTGTGGGGAGTTGCAAGGAAATCC
TGCACAACAATTAAAGAGGTGCTCAGTCGCAAGGGCAAGGATTCCAGTGT
GGGCTTGCTCAGATACCTGGATGGTCATGGCTTTATACGGGGTAAGATAG
GGAAGGACCGAGATGGGAGCTTCAAAGCTTCGAATTTGGGGGTTTTGGAA
GCCGGCCAGGAACGTGTTTCGTGGCCGCAGATTGGACGGATGATGTTCGC
TCAGCCGTTTGATGGTGTGAGTGCACCGCTGGCCGTGTCTTCGATCACAG
GCGGAGATGGCTGTTTAGTTGTAACTATTACATGGCAAAAAGGCCTTGCA
GATTCAACGATGTTTGATGGTGTTGTTGATATGATTGCTAGGGAGTTGCG
TCATGCTGCGCGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.10 |
| Note | antiSMASH:Cluster_1.11 |
| DBxref | InterPro:IPR010828 |
| DBxref | PFAM:PF07247 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2372881..2374323 + |
|
