|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2381580..2382679+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000948-T1 ID=KJC3_000948-T1|Name=KJC3_000948-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1100bp|location=Sequence derived from alignment at ch1:2381580..2382679+ (Aspergillus niger KJC3)
CAGAGAGATCCGAGGTGCAATCCATGGTAGGACTCACCATATAAATTCCC
CCATGGCACCAGCAACTGACCTCATCTTTAACTCACAATTGACACGAGAA
ACAGCTACACATTCTTCAACGCCTCAAGATAAACCCAACAACCAAATTAC
TACCAACAATGACAACCTACACAACCGACCATGCCCAGGCAGTCCTCCAA
ACCCACGGGTGGCGCACCATCTCCAATTCGGTCCCCTACGTGCTCCCCTA
CCTCAAACCCAACATGACCATCCTCGACATCGGCTGTGGCCCCGGCAGCA
TCACCGTCGACTTCGCGCGACACGTCCCGGAAGGCCACGTAACAGGGGTA
GAATACGTCTCGGACCCGTTAGACCAAGCGCGCACTCTAGCCTCATCCCA
AGGCATTACCAACATCACCTTTCAAGTAGCCGACATCCACTCCCTCCCCT
TCGCCGACAACACCTTTGACCTAGTCCACGTGCACCAAGTCCTCCAACAC
ATCGCGGATCCCGTCCTCGCCCTGCGCGAAATGCGCCGCGTCGCTAAACC
TGACGGCGGGATCATTGCCGCCCGCGAATCCAGTGCCATGACATGGTATC
CCGAGAACAAGGGGATCGAGCTCTGGCTGGACATTGCTACTAAAATGGCT
CGGGAGAAGGGCGGGAACCCACACCCGGGGTCGAGGATCCATGTGTGGGC
GGAAGAGGCGGGGTTTCCGCAGGAAAGGATCAAGAAGACGGCGGGGTCGT
GGTGCTTTAGTAGTCCAGAGGAACGGAGGTATTGGGGTGGGTCGATGGCA
GGAAGGGCGGCCAATTCGGGGTTCGCGGCACAGGCGGTTGAGGGTGGGTT
TGCGACTAGGGAGCAGTTGGATGGCATTGTAAAGGGGTGGGAGGAGTTTA
TGGAGTGTGAACAGGGGTGGTTTGGCTTGTTACATGGGGAGATTGTTTGT
TGGAAGTAGTGTTGATAAGTGCTTCCCAGTACTTTGAGGCATTTTATAGT
ATGTTCTACTATGCTCCTGTAGTAGTTATAGTATCGCTGTGAGCGGATGA
AATATCGTGTATATATGAGAGTGTGAGTTGAAGCATCTATATCTATCGAG
back to topCoding sequence (CDS) from alignment at ch1:2381580..2382679+ >KJC3_000948-T1 ID=KJC3_000948-T1|Name=KJC3_000948-T1|organism=Aspergillus niger KJC3|type=CDS|length=801bp|location=Sequence derived from alignment at ch1:2381580..2382679+ (Aspergillus niger KJC3)
ATGACAACCTACACAACCGACCATGCCCAGGCAGTCCTCCAAACCCACGG
GTGGCGCACCATCTCCAATTCGGTCCCCTACGTGCTCCCCTACCTCAAAC
CCAACATGACCATCCTCGACATCGGCTGTGGCCCCGGCAGCATCACCGTC
GACTTCGCGCGACACGTCCCGGAAGGCCACGTAACAGGGGTAGAATACGT
CTCGGACCCGTTAGACCAAGCGCGCACTCTAGCCTCATCCCAAGGCATTA
CCAACATCACCTTTCAAGTAGCCGACATCCACTCCCTCCCCTTCGCCGAC
AACACCTTTGACCTAGTCCACGTGCACCAAGTCCTCCAACACATCGCGGA
TCCCGTCCTCGCCCTGCGCGAAATGCGCCGCGTCGCTAAACCTGACGGCG
GGATCATTGCCGCCCGCGAATCCAGTGCCATGACATGGTATCCCGAGAAC
AAGGGGATCGAGCTCTGGCTGGACATTGCTACTAAAATGGCTCGGGAGAA
GGGCGGGAACCCACACCCGGGGTCGAGGATCCATGTGTGGGCGGAAGAGG
CGGGGTTTCCGCAGGAAAGGATCAAGAAGACGGCGGGGTCGTGGTGCTTT
AGTAGTCCAGAGGAACGGAGGTATTGGGGTGGGTCGATGGCAGGAAGGGC
GGCCAATTCGGGGTTCGCGGCACAGGCGGTTGAGGGTGGGTTTGCGACTA
GGGAGCAGTTGGATGGCATTGTAAAGGGGTGGGAGGAGTTTATGGAGTGT
GAACAGGGGTGGTTTGGCTTGTTACATGGGGAGATTGTTTGTTGGAAGTA
G back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000948-T1.utr5p1 | KJC3_000948-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000948-T1.utr3p1 | KJC3_000948-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.10 |
| Note | antiSMASH:Cluster_1.11 |
| Note | SMCOG1089:methyltransferase |
| DBxref | InterPro:IPR029063 |
| DBxref | InterPro:IPR025714 |
| DBxref | PFAM:PF01209 |
| DBxref | PFAM:PF05401 |
| DBxref | PFAM:PF07021 |
| DBxref | PFAM:PF13847 |
| DBxref | PFAM:PF13649 |
| DBxref | PFAM:PF13489 |
| DBxref | PFAM:PF08242 |
| DBxref | PFAM:PF08241 |
| Product | putative secondary metabolism biosynthetic enzyme |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2381580..2382679 + |
|
