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KJC3_000949-T1, KJC3_000949-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000949-T1
Unique NameKJC3_000949-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2383244..2384934-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000949-T1 ID=KJC3_000949-T1|Name=KJC3_000949-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1691bp|location=Sequence derived from alignment at ch1:2383244..2384934- (Aspergillus niger KJC3)
TGCATGGCTAAGAGGGAACTATTAGCTAAACTGCTAGGCATCAATGCCCC
TCCATCTGACGCATCTTGCTGCCTCTCTGCAGCTAGTTAGTCACTGCCAT
TGTACATTCCTCACCATGCCTTCTCCAGGGTAAACCCGTCCAGCCACTGT
GTTCAAGTCCATCTATTGTTTGTGAATAGAAATGCGTTCAATCTAGACCT
CCGGTTGATCCCGGGATCCACCACCCTTCAGGGGCCCATGATGCCGTCCA
TTGTTTACGTCTCTGCCTAATCCGTTCTGCATCTCCAGACTGCCAGATCT
ACAGCCTCCCAGTCATCACTCCTCCACCAGACTATTGACGCTTCCCCATC
CCGACTAATAACCCAGTGGGGAACCGTCTCCTTACTCTTAGCGCCTGTTT
GGGTCCCGATGGGCTGAGTGCGAATCCCTGGGAGCCGTTAATCCCGGCCT
AACTGGACTGACTTACGCGCCAGTGACAGGGTGAAGTCGAAGAGGGGCCA
CCCCCATTGATGCATCCGTGTCCAGAGTCCCAACTTCATTCCCCCTCCAC
CTGACAGGGTCTCCGGAGCCGCTTTAGATATTTAAGGGTCTTTCATCCTT
CCCTTCTTCTCTTCTTCTTCTCTCTCTCTCTTTATCTTTCTATCTCCCTC
CCTCAACTTTCTCCTAATCCTTCCACAACCACCATGTCTTACTACCCCCC
ACCACAGGAATCCTACTACGGCGGACGCCCACCGTACGAGCGTCCGCCAT
ACGATCGTCCTCCCTACGAGGGTGGTCCTCCCCCGGAGCGTCCCCCCTAT
GACCGTCCTCCCTATGAGCGCCCCCCTCCAGAGAGATACAACTCCGGCCC
TCCTCCGCCGGAGCGCCCTCCCTACGACCGTCCCCCATACGGTGATCGGT
CTCCCTACGAAGGCGGCGAGCGCGGCTTCGACTCTCCTGCTCCTCGTCCT
CCCTACACCAGCCCTCCTCCTTCCGCTCGTCCTCCCCCCGTCCCTCCCCC
TCCTCTCCCCATGGACTGGGCCCAGGAGTGGGAGCCCAGCGTCCGCCGCG
CCTTCTACGTCCACATTCCCTCCGGCCGCACAGAATGGGAGCTTCCCGCT
GACATGTCCCGTGACATGCCTCCTCCTGGCCCTCCCCCGGCCGGTGGACC
GGGCTACTACGGAAGCCCCCCTCCGCCGCAGGAGGGCGGGTACTACCCCG
ACCCCCAGGCCCAGCAGATCTCCGAGGAGGAGCAGAAGAAGAAGGACCGT
AAGAACATGCTTCTCGGTGGCGCAGCTGGTGTGGCTATCGGTGCTCTCGG
TGCTGCATTCGTCTCACACGAGATTCGTACGTTTCCCCCCTCTCCCCTTC
CCTTCCAAGGCCACATTCATGGTGACGGTATATACTGCATACTAACAAGA
ACAATAGACGAGCACGAAGAAAAGGAAGAAGAGGAGGAGCGTGAAGAACA
GCAGTCGTACGACTATGACCGGCCGCCTGTCGTGTACGAGCGCGAAACCA
CTATCATCGAGCGTGGAGAGGAGCCTGCCTATGAGAATTACGATGAGGAT
GGATGGTAGATGCGGTATACCTATTCCTACCTGTTAATAACCAAATTCTA
TTCGCATAAGCTTTCGGGATCGTTTAGCTGTATTTATTATACTTTTTAAC
TGAATACCTACCTTCTATGATACTCGGATTGTCTGTCGGAG
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Coding sequence (CDS) from alignment at ch1:2383244..2384934-

>KJC3_000949-T1 ID=KJC3_000949-T1|Name=KJC3_000949-T1|organism=Aspergillus niger KJC3|type=CDS|length=876bp|location=Sequence derived from alignment at ch1:2383244..2384934- (Aspergillus niger KJC3)
ATGTCTTACTACCCCCCACCACAGGAATCCTACTACGGCGGACGCCCACC
GTACGAGCGTCCGCCATACGATCGTCCTCCCTACGAGGGTGGTCCTCCCC
CGGAGCGTCCCCCCTATGACCGTCCTCCCTATGAGCGCCCCCCTCCAGAG
AGATACAACTCCGGCCCTCCTCCGCCGGAGCGCCCTCCCTACGACCGTCC
CCCATACGGTGATCGGTCTCCCTACGAAGGCGGCGAGCGCGGCTTCGACT
CTCCTGCTCCTCGTCCTCCCTACACCAGCCCTCCTCCTTCCGCTCGTCCT
CCCCCCGTCCCTCCCCCTCCTCTCCCCATGGACTGGGCCCAGGAGTGGGA
GCCCAGCGTCCGCCGCGCCTTCTACGTCCACATTCCCTCCGGCCGCACAG
AATGGGAGCTTCCCGCTGACATGTCCCGTGACATGCCTCCTCCTGGCCCT
CCCCCGGCCGGTGGACCGGGCTACTACGGAAGCCCCCCTCCGCCGCAGGA
GGGCGGGTACTACCCCGACCCCCAGGCCCAGCAGATCTCCGAGGAGGAGC
AGAAGAAGAAGGACCGTAAGAACATGCTTCTCGGTGGCGCAGCTGGTGTG
GCTATCGGTGCTCTCGGTGCTGCATTCGTCTCACACGAGATTCGTACGTT
TCCCCCCTCTCCCCTTCCCTTCCAAGGCCACATTCATGGTGACGGTATAT
ACTGCATACTAACAAGAACAATAGACGAGCACGAAGAAAAGGAAGAAGAG
GAGGAGCGTGAAGAACAGCAGTCGTACGACTATGACCGGCCGCCTGTCGT
GTACGAGCGCGAAACCACTATCATCGAGCGTGGAGAGGAGCCTGCCTATG
AGAATTACGATGAGGATGGATGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000949KJC3_000949Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000949-T1KJC3_000949-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000949-T1.cdsKJC3_000949-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000949-T1.utr3p1KJC3_000949-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000949-T1.exon2KJC3_000949-T1.exon2Aspergillus niger KJC3exon
KJC3_000949-T1.exon1KJC3_000949-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000949-T1.utr5p2KJC3_000949-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000949-T1.utr5p1KJC3_000949-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_1.10
NoteantiSMASH:Cluster_1.11
DBxrefInterPro:IPR036020
DBxrefInterPro:IPR001202
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2383244..2384934 -
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