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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2403700..2405129+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000954-T1 ID=KJC3_000954-T1|Name=KJC3_000954-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1430bp|location=Sequence derived from alignment at ch1:2403700..2405129+ (Aspergillus niger KJC3)
TATACGGATACGTGCCGTTCATTGCCGGGTTGTGAGGAATAGCGAGCGCC
CCGCGGTTTCACGCCTCAACGCGTGCCCCCGCCGATCCCCCTTGCAACAT
CTCTGAACACCAACAGGCATCAGTCATGTCCATATTGTCCACGAGTCGGG
CATTCCTCTGCCATCCTGGGCGATTGAGACCAGTCTCCCTCCCACGGATA
CTCTCATTGAATACACCACAATGTCGCAGACTCACCCAAACGCTCCGACT
GGGCGACTCCACCCCAATTTACTATCCGCGTCCCATCTCTTACGCATTTG
ACCCAGCCGCTCCAGCAAACCAGTCTGGTACAACACTCCAAGCATTCTCA
TTTCTACACTCGTCAAACCTTGCGCAAACTTCAGAGTACCAACATTCTAT
ACCCCTAAACCCACAAGACCTAAAAGTTCCCTGGCCAACCTCACTCCCAT
GCGCTCTCCAATCTCAATACTGGCGCGAAGCAGAAGACGCGGCAAGCGAT
TTCTTACAAACCCTCTTCGCATCCAATAACAACCCGAAAGGAGACAAATA
CCTCACCGCCGTGACAGACGCAGTGGTATCCTATGCAATCAACCTCATCC
CACTCTGCGATCTAGCCAGAATCAAACTTCTGTCCAGAACCTTCGTTCTA
GCCTTTTTGCACGACGATGCAGTGGATGCGGGGAATGTCAGCGATAAAAA
TGTCTTGATCCCTATCGAAAGGAATAGCCCAACACCTCACAAAGCATTCG
ACATCCTCTCAGAGGAGATCCTCGCTGCAGACCCTATCAATGGGGCTATT
CTGGTCGAAGACATCCTATCATGGGGCTCTACGTCCTGGAATCACCAGCA
GGGTCCAACACATTTCAAATCGTTGGATGAGTATATCGCCCACGGACTAG
AGGATTTCGGAGCGACGCTTATTCTCCGTTGCGTGGAGTTTTCTATCACT
ACCCCTTGTTCATCTTCCTCGCCGACAGATCTTCAAAGCGTCAGCTACTT
GAAGTCCCTCTGCGCGAAGCATTTGCTCCTTACAAACGATCTGTACTCCT
ACGCCAAGGAAGTAGCCAGCGGAGATGCAGGTCTCAATGCAGTCCGAGTC
GTGCAGGATCTTATGGGCGTTTCTGACTCCTCAGCGAAGATGATGATCCG
ATTTATGCTGCGGGATTTAGAGAGACAGATGGATGAGGAGTATACTCGAC
TGCTCACGAGTAGCAGTATGAATGTGAACGACGTGCAACTGAAACACGCG
CGAGCAATGATCATCGCTGTAGCAGGAAACATGTTCTTCTCGGCGACATG
TGATCGGTATGCGAGGGCCGTGGAGGGGTCGAGACTGCTATAATCATATA
TATGTATATAAATTTCTACCTACCATGATATTAAACTGTAAGTAGGCACT
ATACTTTACAATTATCGATGACGATTCCAT back to topCoding sequence (CDS) from alignment at ch1:2403700..2405129+ >KJC3_000954-T1 ID=KJC3_000954-T1|Name=KJC3_000954-T1|organism=Aspergillus niger KJC3|type=CDS|length=1218bp|location=Sequence derived from alignment at ch1:2403700..2405129+ (Aspergillus niger KJC3)
ATGTCCATATTGTCCACGAGTCGGGCATTCCTCTGCCATCCTGGGCGATT
GAGACCAGTCTCCCTCCCACGGATACTCTCATTGAATACACCACAATGTC
GCAGACTCACCCAAACGCTCCGACTGGGCGACTCCACCCCAATTTACTAT
CCGCGTCCCATCTCTTACGCATTTGACCCAGCCGCTCCAGCAAACCAGTC
TGGTACAACACTCCAAGCATTCTCATTTCTACACTCGTCAAACCTTGCGC
AAACTTCAGAGTACCAACATTCTATACCCCTAAACCCACAAGACCTAAAA
GTTCCCTGGCCAACCTCACTCCCATGCGCTCTCCAATCTCAATACTGGCG
CGAAGCAGAAGACGCGGCAAGCGATTTCTTACAAACCCTCTTCGCATCCA
ATAACAACCCGAAAGGAGACAAATACCTCACCGCCGTGACAGACGCAGTG
GTATCCTATGCAATCAACCTCATCCCACTCTGCGATCTAGCCAGAATCAA
ACTTCTGTCCAGAACCTTCGTTCTAGCCTTTTTGCACGACGATGCAGTGG
ATGCGGGGAATGTCAGCGATAAAAATGTCTTGATCCCTATCGAAAGGAAT
AGCCCAACACCTCACAAAGCATTCGACATCCTCTCAGAGGAGATCCTCGC
TGCAGACCCTATCAATGGGGCTATTCTGGTCGAAGACATCCTATCATGGG
GCTCTACGTCCTGGAATCACCAGCAGGGTCCAACACATTTCAAATCGTTG
GATGAGTATATCGCCCACGGACTAGAGGATTTCGGAGCGACGCTTATTCT
CCGTTGCGTGGAGTTTTCTATCACTACCCCTTGTTCATCTTCCTCGCCGA
CAGATCTTCAAAGCGTCAGCTACTTGAAGTCCCTCTGCGCGAAGCATTTG
CTCCTTACAAACGATCTGTACTCCTACGCCAAGGAAGTAGCCAGCGGAGA
TGCAGGTCTCAATGCAGTCCGAGTCGTGCAGGATCTTATGGGCGTTTCTG
ACTCCTCAGCGAAGATGATGATCCGATTTATGCTGCGGGATTTAGAGAGA
CAGATGGATGAGGAGTATACTCGACTGCTCACGAGTAGCAGTATGAATGT
GAACGACGTGCAACTGAAACACGCGCGAGCAATGATCATCGCTGTAGCAG
GAAACATGTTCTTCTCGGCGACATGTGATCGGTATGCGAGGGCCGTGGAG
GGGTCGAGACTGCTATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000954-T1.utr5p1 | KJC3_000954-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000954-T1.utr3p1 | KJC3_000954-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.12 |
| Note | SMCOG1052:Terpene synthase/cyclase metal-binding domain protein |
| DBxref | InterPro:IPR008949 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2403700..2405129 + |
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