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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2457595..2459002+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000973-T1 ID=KJC3_000973-T1|Name=KJC3_000973-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1408bp|location=Sequence derived from alignment at ch1:2457595..2459002+ (Aspergillus niger KJC3)
CTGTTCTTTCCTGTACTTCCCAGACCCCCGTACCTGGTAACAATCCCGTC
GTGGTTAATTTCACCAAAATCAATTGGCTGAACACTAAACCCCTTCGTCG
GATCTTTCTTCCCACGTTGCCTCTTTCTCCTTCTCGCTCTCTCGCTTTCG
CTTTTCTCCTTCTCCCTCTCTCTCTCTTCCGCCCTCCCTTCCCTCCCTTC
CAATCCCATTCGGTGGTCTCAGCCTGGGCTTTTCGCAGGCGCGTTATGAA
ATGAGACTATCCTACCGGATTGGTGCGGCTGCACTTATCATCCTCGCCAT
CATCCTCATTAAACGCCACCTCGACCTCGTCCAGGATGATGCGCGCGTTC
AGTCCGGCTGGAGTTTCAGCTCCTTCTCCGCCGAATCTGCAGCGGATGGC
AGCAGCAACAATGTGAACAGTGGCAACGACGGGGTGTCAACTCCGAAGAA
CTCGAAACCTATTCTTACCGGCAGCGACAACAGCAACAGCAATGGCAAAA
CCAAAGGCTCCTCCGATTCGGCCGTCTCGCGTCCACTCTACGAAACCACT
CCCATTATCGTCCCGAATGATCGCGTTATCGTCATGGCAAAGTTATCTAC
CGAGGACACCAGCTGGGTGAGCAATGATCTGGCAGAGTACGTATCCTAAT
TGCACACCCTCTCACAATCGAACCAAATCCCTAACAAAACTGAATCACCA
GATGGCGCAACGTCATCTACACCGTCGACGACGTGACCGCACCCCGGCAC
ACCCCCAAGAACAAGGGTCGCGAATCGCTCGCCTACCTCCAATACATCGT
GGATCATTACGACGACCTCCCCAGCACGATCGTCTTCCTCCACAGCCACA
AAGACGGCTGGCCCGGCGCCTGGCACACCGACACCATGGCCTACAGCAAC
GTGGATTCCATCCGAGCCTTACAAACCGACTTCGTGCAACGAAACGGCTA
CGTCAACCTCCGGTGCCAGCAGACGCCCGGCTGTCCCGATGAGATTCGCC
CCTTCCGAGACCCCCCGCAATTCGGAAAGACGGCGGAGCGCGTGTACGCG
CAGGCGTGGGTGGAGCTGTTCAACAACACCAACGTACCGGATGTGGTTGG
AGTGGCGTGCTGCTCGCAATTCGCTGTGTCGAGGGAGCAGGTCCTCAAGC
GGCCATTGGAGCACTACACGTGGTTCTATGACTGGGTGTTGAATACAGGG
TTGTCGGATGATTTGAGTGCCCATGTGATGGAGTATACATGGCATATTAT
TTTTGGAAAGGATCCGGTCTAGTACGTTCCCCCCTCCCCTGTTCCTCGGG
TTGAGTTCAAAAAGAGTAGTGGAGAAATAATAATACTAACGAGAATACAG
CTGCCCCGACGCCTATCAGTGCTACCAGGATGTCTACGGCAATCCTTATT
TCTGGTGA back to topCoding sequence (CDS) from alignment at ch1:2457595..2459002+ >KJC3_000973-T1 ID=KJC3_000973-T1|Name=KJC3_000973-T1|organism=Aspergillus niger KJC3|type=CDS|length=3042bp|location=Sequence derived from alignment at ch1:2457595..2459002+ (Aspergillus niger KJC3)
ATGAGACTATCCTACCGGATTGGTGCGGCTGCACTTATCATCCTCGCCAT
CATCCTCATTAAACGCCACCTCGACCTCGTCCAGGATGATGCGCGCGTTC
AGTCCGGCTGGAGTTTCAGCTCCTTCTCCGCCGAATCTGCAGCGGATGGC
AGCAGCAACAATGTGAACAGTGGCAACGACGGGGTGTCAACTCCGAAGAA
CTCGAAACCTATTCTTACCGGCAGCGACAACAGCAACAGCAATGGCAAAA
CCAAAGGCTCCTCCGATTCGGCCGTCTCGCGTCCACTCTACGAAACCACT
CCCATTATCGTCCCGAATGATCGCGTTATCGTCATGGCAAAGTTATCTAC
CGAGGACACCAGCTGGGTGAGCAATGATCTGGCAGAATGGCGCAACGTCA
TCTACACCGTCGACGACGTGACCGCACCCCGGCACACCCCCAAGAACAAG
GGTCGCGAATCGCTCGCCTACCTCCAATACATCGTGGATCATTACGACGA
CCTCCCCAGCACGATCGTCTTCCTCCACAGCCACAAAGACGGCTGGCCCG
GCGCCTGGCACACCGACACCATGGCCTACAGCAACGTGGATTCCATCCGA
GCCTTACAAACCGACTTCGTGCAACGAAACGGCTACGTCAACCTCCGGTG
CCAGCAGACGCCCGGCTGTCCCGATGAGATTCGCCCCTTCCGAGACCCCC
CGCAATTCGGAAAGACGGCGGAGCGCGTGTACGCGCAGGCGTGGGTGGAG
CTGTTCAACAACACCAACGTACCGGATGTGGTTGGAGTGGCGTGCTGCTC
GCAATTCGCTGTGTCGAGGGAGCAGGTCCTCAAGCGGCCATTGGAGCACT
ACACGTGGTTCTATGACTGGGTGTTGAATACAGGGTTGTCGGATGATTTG
AGTGCCCATGTGATGGAGTATACATGGCATATTATTTTTGGAAAGGATCC
GGTCTACTGCCCCGACGCCTATCAGTGCTACCAGGATGTCTACGGCAATC
CTTATTTCTGGTGAATGAGACTATCCTACCGGATTGGTGCGGCTGCACTT
ATCATCCTCGCCATCATCCTCATTAAACGCCACCTCGACCTCGTCCAGGA
TGATGCGCGCGTTCAGTCCGGCTGGAGTTTCAGCTCCTTCTCCGCCGAAT
CTGCAGCGGATGGCAGCAGCAACAATGTGAACAGTGGCAACGACGGGGTG
TCAACTCCGAAGAACTCGAAACCTATTCTTACCGGCAGCGACAACAGCAA
CAGCAATGGCAAAACCAAAGGCTCCTCCGATTCGGCCGTCTCGCGTCCAC
TCTACGAAACCACTCCCATTATCGTCCCGAATGATCGCGTTATCGTCATG
GCAAAGTTATCTACCGAGGACACCAGCTGGGTGAGCAATGATCTGGCAGA
ATGGCGCAACGTCATCTACACCGTCGACGACGTGACCGCACCCCGGCACA
CCCCCAAGAACAAGGGTCGCGAATCGCTCGCCTACCTCCAATACATCGTG
GATCATTACGACGACCTCCCCAGCACGATCGTCTTCCTCCACAGCCACAA
AGACGGCTGGCCCGGCGCCTGGCACACCGACACCATGGCCTACAGCAACG
TGGATTCCATCCGAGCCTTACAAACCGACTTCGTGCAACGAAACGGCTAC
GTCAACCTCCGGTGCCAGCAGACGCCCGGCTGTCCCGATGAGATTCGCCC
CTTCCGAGACCCCCCGCAATTCGGAAAGACGGCGGAGCGCGTGTACGCGC
AGGCGTGGGTGGAGCTGTTCAACAACACCAACGTACCGGATGTGGTTGGA
GTGGCGTGCTGCTCGCAATTCGCTGTGTCGAGGGAGCAGGTCCTCAAGCG
GCCATTGGAGCACTACACGTGGTTCTATGACTGGGTGTTGAATACAGGGT
TGTCGGATGATTTGAGTGCCCATGTGATGGAGTATACATGGCATATTATT
TTTGGAAAGGATCCGGTCTACTGCCCCGACGCCTATCAGTGCTACCAGGA
TGTCTACGGCAATCCTTATTTCTGGTGAATGAGACTATCCTACCGGATTG
GTGCGGCTGCACTTATCATCCTCGCCATCATCCTCATTAAACGCCACCTC
GACCTCGTCCAGGATGATGCGCGCGTTCAGTCCGGCTGGAGTTTCAGCTC
CTTCTCCGCCGAATCTGCAGCGGATGGCAGCAGCAACAATGTGAACAGTG
GCAACGACGGGGTGTCAACTCCGAAGAACTCGAAACCTATTCTTACCGGC
AGCGACAACAGCAACAGCAATGGCAAAACCAAAGGCTCCTCCGATTCGGC
CGTCTCGCGTCCACTCTACGAAACCACTCCCATTATCGTCCCGAATGATC
GCGTTATCGTCATGGCAAAGTTATCTACCGAGGACACCAGCTGGGTGAGC
AATGATCTGGCAGAATGGCGCAACGTCATCTACACCGTCGACGACGTGAC
CGCACCCCGGCACACCCCCAAGAACAAGGGTCGCGAATCGCTCGCCTACC
TCCAATACATCGTGGATCATTACGACGACCTCCCCAGCACGATCGTCTTC
CTCCACAGCCACAAAGACGGCTGGCCCGGCGCCTGGCACACCGACACCAT
GGCCTACAGCAACGTGGATTCCATCCGAGCCTTACAAACCGACTTCGTGC
AACGAAACGGCTACGTCAACCTCCGGTGCCAGCAGACGCCCGGCTGTCCC
GATGAGATTCGCCCCTTCCGAGACCCCCCGCAATTCGGAAAGACGGCGGA
GCGCGTGTACGCGCAGGCGTGGGTGGAGCTGTTCAACAACACCAACGTAC
CGGATGTGGTTGGAGTGGCGTGCTGCTCGCAATTCGCTGTGTCGAGGGAG
CAGGTCCTCAAGCGGCCATTGGAGCACTACACGTGGTTCTATGACTGGGT
GTTGAATACAGGGTTGTCGGATGATTTGAGTGCCCATGTGATGGAGTATA
CATGGCATATTATTTTTGGAAAGGATCCGGTCTACTGCCCCGACGCCTAT
CAGTGCTACCAGGATGTCTACGGCAATCCTTATTTCTGGTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000973-T1.utr5p1 | KJC3_000973-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021838 |
| DBxref | PFAM:PF11913 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2457595..2459002 + |
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