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KJC3_000982-T1, KJC3_000982-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000982-T1
Unique NameKJC3_000982-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2483231..2485352+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000982-T1 ID=KJC3_000982-T1|Name=KJC3_000982-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2122bp|location=Sequence derived from alignment at ch1:2483231..2485352+ (Aspergillus niger KJC3)
CTTTACTTTTGCATGGTCCCAAACGATGGAAGAAACCTCATCTTCCTTGT
CGAACGGATCCAATCAGGCCGAATCGCCCCCAAACGGCTGTGGCTGACTA
ACGCGAGCAGGAAGCATTAGTGTCATCCTCCCACTGCCTCATCCTGGTTT
CCCCCCCATTCGTTCCCCATTGCCCTGGCCATGACTCTCTTGATTCTCGC
TGGCTGGATAGCCAGTTCGCATATATAGGCTGCGGAATCTTGGCCTGCTT
CCAACATGTCATCATCAACCATGGGTGTTCAGGAAACAGCGCCGAAGAAA
AGAACTCGGGTCAGTCACACCAAGGTGCGTACGGGTTGTCGGACCTGTAG
GTACGGAGTCACCGTGGATCTTGGATTGTTTGCTTGTGCGTGGGGACACC
ATCGTTAATGTGGATCATGTAGGATACGCCACAAGAAATGTGACGAGACC
CGACCTATCTGTCGCATGTGCAGCAGCACTGGACGGATTTGCGATGGATA
CCAGCAAACAATCGATAGGAGAACGCGCGCTTCCAGACTCCGGCTCGCTT
CAACATCGCCATCATCGACGAGCAGCTCATCTTCAACGGTGAGTGTGCCG
TCTCTAGTGTCGGATCTGATCTTACACACCAATGAGATCGACCTCACCCG
GCAGGAGCGTTGGTATCTCGACTTCTTCCGCAGGAATACTTCTTTTCAAT
GTTCTGGTTACTTTGACGATGATTTCTGGCTGCGTCTGGTACACCAAGTC
ACCGAGGCCGAGCCAGCGGTCAGACACGCTGCCATTGCCCTAAGTGCGCT
CCACTGTAACTTTGAGCGAACCAGCACCGGACAGGGGGCCATAGACAGCC
GTCTGCCTCTCCAGCAATGTGTCAAAGCAATTTCCTCACTGAGACATCAG
CTAGCGGGCGGAGGAGTTCTATCCCGCTCTAACATGCAAATAACCCTCGT
CACCTGCGTACTCTTCGTCTCGTTCATGTTCCTGCAGGGTGATACGCACT
CTGCCTATTGTCACTTGCGTGGGGGTCTCAAACTCCTCAAAGAATGGAGA
TCCACAGACATGCCGGGCTATTCAACCACTGGTGCAGTGCTAATGAAAGT
ATTTGCCCATCTACAACTACAATGGTCGACGTTCGCCGACGAAGTCTTCA
TTGAAGAGGTAGATAGCAATCGCTTCGACGTTCCCTATATAGAGATCAAT
GATCTCAGCCTCGAAGAGCCGACCGACAGCTTAGAAAAGGCAGGCAGCCT
GCTCGTCAGTCTAGGCCGACTCGTCTTGACTCCACGTCCTCCCGGCACCT
CCTCACCAGGCTACTGCACCGTCCTAGACAGCAGACGCATGGCCATCCTT
AACAAACTCCAGCATTGGACCACCGAACTCGATAACTCAATGACATGCGC
CGGAAACACCCTCATCCTCCGCGACAACACCATCCTAACCGTCCTAAAAC
TCTGGAGCGAGATCATCTACATCATGGCCGCGACAGAAACGCGTCTTGGC
GGCAGCGAAACCCGCTTCGATGCCTTTCACCTCAACTTCGGCCGAGCCGT
GGCGCTCGCCAAAATCCTCCTCCTCTCCACACCCGCCCAATCAACCATGC
CTAATTTCTCCATCGGAATGGGCATCATCCCCCCTCTTTTCTTCTGCGCC
TTCAAATGTCGCGACTGGTACATCCGGAGAGAAGCATTACAATTACTACG
CAGCTGCCAGAGACAAGAAGGTCTCTGGACAACACCGGGGGCCGTGCTCG
TCCTGGAACGGCTGATCGATATTGAATCTAAAGGCCTCATGCCGGGAGAC
CTGGTTCCAGAGTCACGCCGCGTTGACTCGATTCATGTGAATATCCTTCC
GGATGATCATAAGATTGGGTTATGGTATCGTCGATCGGGCATGGGCGTGG
GTTTGGATGGCTATATGGATGTAGGTTCGGGGATGTGGGAGAAGGCATTA
CTGGAATACCATGTTGGATGACTACTTACCTGGATAAAGGTTTTAATGCG
ACTTTGGTCGGGGGCTTATCTTGTACGATTAGATACCATTCTGTTATGGC
GTTAGTTTATATATCACTCATATTACCAGTTCAAGATAATTCAACACAAT
CAATGGTTGTATATAAGCAGAT
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Coding sequence (CDS) from alignment at ch1:2483231..2485352+

>KJC3_000982-T1 ID=KJC3_000982-T1|Name=KJC3_000982-T1|organism=Aspergillus niger KJC3|type=CDS|length=3288bp|location=Sequence derived from alignment at ch1:2483231..2485352+ (Aspergillus niger KJC3)
ATGTCATCATCAACCATGGGTGTTCAGGAAACAGCGCCGAAGAAAAGAAC
TCGGGTCAGTCACACCAAGGTGCGTACGGGTTGTCGGACCTGTAGGATAC
GCCACAAGAAATGTGACGAGACCCGACCTATCTGTCGCATGTGCAGCAGC
ACTGGACGGATTTGCGATGGATACCAGCAAACAATCGATAGGAGAACGCG
CGCTTCCAGACTCCGGCTCGCTTCAACATCGCCATCATCGACGAGCAGCT
CATCTTCAACGGTGAGTGTGCCGTCTCTAGTGTCGGATCTGATCTTACAC
ACCAATGAGATCGACCTCACCCGGCAGGAGCGTTGGTATCTCGACTTCTT
CCGCAGGAATACTTCTTTTCAATGTTCTGGTTACTTTGACGATGATTTCT
GGCTGCGTCTGGTACACCAAGTCACCGAGGCCGAGCCAGCGGTCAGACAC
GCTGCCATTGCCCTAAGTGCGCTCCACTGTAACTTTGAGCGAACCAGCAC
CGGACAGGGGGCCATAGACAGCCGTCTGCCTCTCCAGCAATGTGTCAAAG
CAATTTCCTCACTGAGACATCAGCTAGCGGGCGGAGGAGTTCTATCCCGC
TCTAACATGCAAATAACCCTCGTCACCTGCGTACTCTTCGTCTCGTTCAT
GTTCCTGCAGGGTGATACGCACTCTGCCTATTGTCACTTGCGTGGGGGTC
TCAAACTCCTCAAAGAATGGAGATCCACAGACATGCCGGGCTATTCAACC
ACTGGTGCAGTGCTAATGAAAGTATTTGCCCATCTACAACTACAATGGTC
GACGTTCGCCGACGAAGTCTTCATTGAAGAGGTAGATAGCAATCGCTTCG
ACGTTCCCTATATAGAGATCAATGATCTCAGCCTCGAAGAGCCGACCGAC
AGCTTAGAAAAGGCAGGCAGCCTGCTCGTCAGTCTAGGCCGACTCGTCTT
GACTCCACGTCCTCCCGGCACCTCCTCACCAGGCTACTGCACCGTCCTAG
ACAGCAGACGCATGGCCATCCTTAACAAACTCCAGCATTGGACCACCGAA
CTCGATAACTCAATGACATGCGCCGGAAACACCCTCATCCTCCGCGACAA
CACCATCCTAACCGTCCTAAAACTCTGGAGCGAGATCATCTACATCATGG
CCGCGACAGAAACGCGTCTTGGCGGCAGCGAAACCCGCTTCGATGCCTTT
CACCTCAACTTCGGCCGAGCCGTGGCGCTCGCCAAAATCCTCCTCCTCTC
CACACCCGCCCAATCAACCATGCCTAATTTCTCCATCGGAATGGGCATCA
TCCCCCCTCTTTTCTTCTGCGCCTTCAAATGTCGCGACTGGTACATCCGG
AGAGAAGCATTACAATTACTACGCAGCTGCCAGAGACAAGAAGGTCTCTG
GACAACACCGGGGGCCGTGCTCGTCCTGGAACGGCTGATCGATATTGAAT
CTAAAGGCCTCATGCCGGGAGACCTGGTTCCAGAGTCACGCCGCGTTGAC
TCGATTCATGTGAATATCCTTCCGGATGATCATAAGATTGGGTTATGGTA
TCGTCGATCGGGCATGGGCGTGGGTTTGGATGGCTATATGGATGTAGGTT
CGGGGATGTGGGAGAAGGCATTACTGGAATACCATGTTGGATGAATGTCA
TCATCAACCATGGGTGTTCAGGAAACAGCGCCGAAGAAAAGAACTCGGGT
CAGTCACACCAAGGTGCGTACGGGTTGTCGGACCTGTAGGATACGCCACA
AGAAATGTGACGAGACCCGACCTATCTGTCGCATGTGCAGCAGCACTGGA
CGGATTTGCGATGGATACCAGCAAACAATCGATAGGAGAACGCGCGCTTC
CAGACTCCGGCTCGCTTCAACATCGCCATCATCGACGAGCAGCTCATCTT
CAACGGTGAGTGTGCCGTCTCTAGTGTCGGATCTGATCTTACACACCAAT
GAGATCGACCTCACCCGGCAGGAGCGTTGGTATCTCGACTTCTTCCGCAG
GAATACTTCTTTTCAATGTTCTGGTTACTTTGACGATGATTTCTGGCTGC
GTCTGGTACACCAAGTCACCGAGGCCGAGCCAGCGGTCAGACACGCTGCC
ATTGCCCTAAGTGCGCTCCACTGTAACTTTGAGCGAACCAGCACCGGACA
GGGGGCCATAGACAGCCGTCTGCCTCTCCAGCAATGTGTCAAAGCAATTT
CCTCACTGAGACATCAGCTAGCGGGCGGAGGAGTTCTATCCCGCTCTAAC
ATGCAAATAACCCTCGTCACCTGCGTACTCTTCGTCTCGTTCATGTTCCT
GCAGGGTGATACGCACTCTGCCTATTGTCACTTGCGTGGGGGTCTCAAAC
TCCTCAAAGAATGGAGATCCACAGACATGCCGGGCTATTCAACCACTGGT
GCAGTGCTAATGAAAGTATTTGCCCATCTACAACTACAATGGTCGACGTT
CGCCGACGAAGTCTTCATTGAAGAGGTAGATAGCAATCGCTTCGACGTTC
CCTATATAGAGATCAATGATCTCAGCCTCGAAGAGCCGACCGACAGCTTA
GAAAAGGCAGGCAGCCTGCTCGTCAGTCTAGGCCGACTCGTCTTGACTCC
ACGTCCTCCCGGCACCTCCTCACCAGGCTACTGCACCGTCCTAGACAGCA
GACGCATGGCCATCCTTAACAAACTCCAGCATTGGACCACCGAACTCGAT
AACTCAATGACATGCGCCGGAAACACCCTCATCCTCCGCGACAACACCAT
CCTAACCGTCCTAAAACTCTGGAGCGAGATCATCTACATCATGGCCGCGA
CAGAAACGCGTCTTGGCGGCAGCGAAACCCGCTTCGATGCCTTTCACCTC
AACTTCGGCCGAGCCGTGGCGCTCGCCAAAATCCTCCTCCTCTCCACACC
CGCCCAATCAACCATGCCTAATTTCTCCATCGGAATGGGCATCATCCCCC
CTCTTTTCTTCTGCGCCTTCAAATGTCGCGACTGGTACATCCGGAGAGAA
GCATTACAATTACTACGCAGCTGCCAGAGACAAGAAGGTCTCTGGACAAC
ACCGGGGGCCGTGCTCGTCCTGGAACGGCTGATCGATATTGAATCTAAAG
GCCTCATGCCGGGAGACCTGGTTCCAGAGTCACGCCGCGTTGACTCGATT
CATGTGAATATCCTTCCGGATGATCATAAGATTGGGTTATGGTATCGTCG
ATCGGGCATGGGCGTGGGTTTGGATGGCTATATGGATGTAGGTTCGGGGA
TGTGGGAGAAGGCATTACTGGAATACCATGTTGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000982KJC3_000982Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000982-T1.utr5p1KJC3_000982-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000982-T1.exon1KJC3_000982-T1.exon1Aspergillus niger KJC3exon
KJC3_000982-T1.exon2KJC3_000982-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000982-T1.cdsKJC3_000982-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000982-T1.utr3p1KJC3_000982-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000982-T1KJC3_000982-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR021858
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
DBxrefPFAM:PF11951
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2483231..2485352 +
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