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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2505329..2507433+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000989-T1 ID=KJC3_000989-T1|Name=KJC3_000989-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2105bp|location=Sequence derived from alignment at ch1:2505329..2507433+ (Aspergillus niger KJC3)
CGCTTACGAGGTGGTCGATATAAGATCTTCCCAGTTTTCCCCTCATCTAT
CAACTTTTCCTTCTTCGAGTCGCTCACGAATCACTCTTCTACTATGTTCC
GGCGGATTATTCCATCGCTGAGGAATCGAGGGAAAATGTCGCCGCATCCC
GACCGTCTATCGAACACCAATCTCGGCAAGTCATTCCATACAGATTGGAA
TACAATCCATGACTGGCATAGCTATACAAGGGGTCGCTTCCTTTTGAATG
AAGCTCATGAACTGAGAATTCGTCGCGCTGATTTCAATATGAATGAATTG
GCCAAGTGTGCGGCCGAAGCGGTCGGCTTTACGTTTTCAGACTGTGTTCG
TATCGAGAAGTTCTCGGATGGAATGTTTAATAAAGCCTTCCTATTCACGA
TGCAGGATGGGACGCAGGTTGTAGGTAAAGTGCCCAATCCAAACGCTGGA
CGGCCTCACTACACCACTGCTAGCGAAGTGGCAACGATGGATTTCGTAAG
CAAGCCTCGATCATTATTGTTATAATCATGATTGTCAAACTCGTGTCTAA
TACTCTGGTTCAGGTAAGGAACGAGCTGAGCACTCCAGTGCCGAAAGTAT
TAGCCTGGAGTTCAAAAGCAGATGGCAACCCAGTTGGTTCAGAATACATC
ATCATGGAGAAGGTTGGGGGTGTTCAACTTGATAAAATATGGCCACAGAT
GGACATCAAGAAGAGGTTCGAACTCATCAAAACAATTTCTAGGTACCAAA
AGGCATGGATGTCAAAATCCTTTACCCAGTACGGGAGTCTCTATTTCTCA
AGCGATCTGCAAGACCACCGTGGATGCATCATTGTGAATGAAGACGGGTC
TCAATCCGAATATGATCGTTTTGCCATTGGTCCAACAACAGGAAGAGAGT
TTCTTGACGACGGTAGGATTGACGTGGACTTCGATCGGGGCCCATGTAAG
ATTCCCCATTGTAGCCTGTCATTATTATTGCTCATCTGACCTCTCTACTA
GGGAATGATTTGCTTTCATACAAATCAGCAATTGGCTTTCGAGAACTTGC
CTGTGTACAAAATATGACTCAGCTACCCCGGTCACTTCTTGGGCTCTACG
GTCCCGGTACATACCAACCTTCACGTCCCAAAAAGGTAGCTGCTATCCAG
GACTATCTCAGTCTGGTGCAGTTCTTTCTTCCCACTGACGACTCGATTTG
TTCCGCATTCTTATGGCATCCTGATCTCCACACCGAAAATATATTTGTCG
ACCCCGACAGGCCGTCAGAAGTCTTAGGCATTATTGACTGGCAATCCAGT
GAAGTTCTACCATTGTTTGATCATGCGCGTCAGCCATACCTTCTTGACTA
TGATGGTCCTCCGGCAACTGGCCTTGATCCACCAGAATTTCCTGAGAACT
TTGATCAGCTTGATCCTCCTGAGAAAGCAAAGGCCGAAAGGTTGTATCTG
AATATATCACTTGCGACTCTTTATAGGAAGCTCACTTATGCCAAAAACAA
GAAATTGTTCGGAGCCATGGAATTTCAGCAGACATCGAGTTTTGACATGA
TGCTATTCGCTCAGAATCTGCTGATCGATGGGGAAGCTCTATACCGGGCC
AGGGTCCTTGAACTTGGAGATGAGTGGCCATGCCTCCCAGGCGTACAAGC
TTCCGGCAATCCTCCTTTTCCTTTAGAATATTCCCCTGAAGAAGTCAGTT
CAATTGAGGAAGATGCGAATGGGGCAACCAGAAGCATGGCATTGATGCAA
GGTGTGAAAGAGTCACTGGGTGAGCTGTGGCCAGAGAAAGGTATTGTGCC
GCCTGAGCGGTATGATGACGCCCGGAAACTTTTAAAACAGGTCAAAACAG
AATTAATTGATCAGCTTGCACAATCAGACGCAGAAAGACTTGAGTGGGAA
AAAGCATGGCCGTTTGATGACTGAGAGGCTTAGTCCTGAAACTTTACACT
TTTATTATCATGACTCAAATCATATATTCTTCCATCTCCCGTTCACTAAA
AGCACTCTCTAGTCAGTTAGAACCTCGATCTGCACTTTGCGTTACATCTC
CTCATCAGCTACTTTAGCTTAGACTTGGATATACAAATATTGAACTACAT
CCGAG back to topCoding sequence (CDS) from alignment at ch1:2505329..2507433+ >KJC3_000989-T1 ID=KJC3_000989-T1|Name=KJC3_000989-T1|organism=Aspergillus niger KJC3|type=CDS|length=5121bp|location=Sequence derived from alignment at ch1:2505329..2507433+ (Aspergillus niger KJC3)
ATGTTCCGGCGGATTATTCCATCGCTGAGGAATCGAGGGAAAATGTCGCC
GCATCCCGACCGTCTATCGAACACCAATCTCGGCAAGTCATTCCATACAG
ATTGGAATACAATCCATGACTGGCATAGCTATACAAGGGGTCGCTTCCTT
TTGAATGAAGCTCATGAACTGAGAATTCGTCGCGCTGATTTCAATATGAA
TGAATTGGCCAAGTGTGCGGCCGAAGCGGTCGGCTTTACGTTTTCAGACT
GTGTTCGTATCGAGAAGTTCTCGGATGGAATGTTTAATAAAGCCTTCCTA
TTCACGATGCAGGATGGGACGCAGGTTGTAGGTAAAGTGCCCAATCCAAA
CGCTGGACGGCCTCACTACACCACTGCTAGCGAAGTGGCAACGATGGATT
TCGTAAGGAACGAGCTGAGCACTCCAGTGCCGAAAGTATTAGCCTGGAGT
TCAAAAGCAGATGGCAACCCAGTTGGTTCAGAATACATCATCATGGAGAA
GGTTGGGGGTGTTCAACTTGATAAAATATGGCCACAGATGGACATCAAGA
AGAGGTTCGAACTCATCAAAACAATTTCTAGGTACCAAAAGGCATGGATG
TCAAAATCCTTTACCCAGTACGGGAGTCTCTATTTCTCAAGCGATCTGCA
AGACCACCGTGGATGCATCATTGTGAATGAAGACGGGTCTCAATCCGAAT
ATGATCGTTTTGCCATTGGTCCAACAACAGGAAGAGAGTTTCTTGACGAC
GGTAGGATTGACGTGGACTTCGATCGGGGCCCATGGAATGATTTGCTTTC
ATACAAATCAGCAATTGGCTTTCGAGAACTTGCCTGTGTACAAAATATGA
CTCAGCTACCCCGGTCACTTCTTGGGCTCTACGGTCCCGGTACATACCAA
CCTTCACGTCCCAAAAAGGTAGCTGCTATCCAGGACTATCTCAGTCTGGT
GCAGTTCTTTCTTCCCACTGACGACTCGATTTGTTCCGCATTCTTATGGC
ATCCTGATCTCCACACCGAAAATATATTTGTCGACCCCGACAGGCCGTCA
GAAGTCTTAGGCATTATTGACTGGCAATCCAGTGAAGTTCTACCATTGTT
TGATCATGCGCGTCAGCCATACCTTCTTGACTATGATGGTCCTCCGGCAA
CTGGCCTTGATCCACCAGAATTTCCTGAGAACTTTGATCAGCTTGATCCT
CCTGAGAAAGCAAAGGCCGAAAGGTTGTATCTGAATATATCACTTGCGAC
TCTTTATAGGAAGCTCACTTATGCCAAAAACAAGAAATTGTTCGGAGCCA
TGGAATTTCAGCAGACATCGAGTTTTGACATGATGCTATTCGCTCAGAAT
CTGCTGATCGATGGGGAAGCTCTATACCGGGCCAGGGTCCTTGAACTTGG
AGATGAGTGGCCATGCCTCCCAGGCGTACAAGCTTCCGGCAATCCTCCTT
TTCCTTTAGAATATTCCCCTGAAGAAGTCAGTTCAATTGAGGAAGATGCG
AATGGGGCAACCAGAAGCATGGCATTGATGCAAGGTGTGAAAGAGTCACT
GGGTGAGCTGTGGCCAGAGAAAGGTATTGTGCCGCCTGAGCGGTATGATG
ACGCCCGGAAACTTTTAAAACAGGTCAAAACAGAATTAATTGATCAGCTT
GCACAATCAGACGCAGAAAGACTTGAGTGGGAAAAAGCATGGCCGTTTGA
TGACTGAATGTTCCGGCGGATTATTCCATCGCTGAGGAATCGAGGGAAAA
TGTCGCCGCATCCCGACCGTCTATCGAACACCAATCTCGGCAAGTCATTC
CATACAGATTGGAATACAATCCATGACTGGCATAGCTATACAAGGGGTCG
CTTCCTTTTGAATGAAGCTCATGAACTGAGAATTCGTCGCGCTGATTTCA
ATATGAATGAATTGGCCAAGTGTGCGGCCGAAGCGGTCGGCTTTACGTTT
TCAGACTGTGTTCGTATCGAGAAGTTCTCGGATGGAATGTTTAATAAAGC
CTTCCTATTCACGATGCAGGATGGGACGCAGGTTGTAGGTAAAGTGCCCA
ATCCAAACGCTGGACGGCCTCACTACACCACTGCTAGCGAAGTGGCAACG
ATGGATTTCGTAAGGAACGAGCTGAGCACTCCAGTGCCGAAAGTATTAGC
CTGGAGTTCAAAAGCAGATGGCAACCCAGTTGGTTCAGAATACATCATCA
TGGAGAAGGTTGGGGGTGTTCAACTTGATAAAATATGGCCACAGATGGAC
ATCAAGAAGAGGTTCGAACTCATCAAAACAATTTCTAGGTACCAAAAGGC
ATGGATGTCAAAATCCTTTACCCAGTACGGGAGTCTCTATTTCTCAAGCG
ATCTGCAAGACCACCGTGGATGCATCATTGTGAATGAAGACGGGTCTCAA
TCCGAATATGATCGTTTTGCCATTGGTCCAACAACAGGAAGAGAGTTTCT
TGACGACGGTAGGATTGACGTGGACTTCGATCGGGGCCCATGGAATGATT
TGCTTTCATACAAATCAGCAATTGGCTTTCGAGAACTTGCCTGTGTACAA
AATATGACTCAGCTACCCCGGTCACTTCTTGGGCTCTACGGTCCCGGTAC
ATACCAACCTTCACGTCCCAAAAAGGTAGCTGCTATCCAGGACTATCTCA
GTCTGGTGCAGTTCTTTCTTCCCACTGACGACTCGATTTGTTCCGCATTC
TTATGGCATCCTGATCTCCACACCGAAAATATATTTGTCGACCCCGACAG
GCCGTCAGAAGTCTTAGGCATTATTGACTGGCAATCCAGTGAAGTTCTAC
CATTGTTTGATCATGCGCGTCAGCCATACCTTCTTGACTATGATGGTCCT
CCGGCAACTGGCCTTGATCCACCAGAATTTCCTGAGAACTTTGATCAGCT
TGATCCTCCTGAGAAAGCAAAGGCCGAAAGGTTGTATCTGAATATATCAC
TTGCGACTCTTTATAGGAAGCTCACTTATGCCAAAAACAAGAAATTGTTC
GGAGCCATGGAATTTCAGCAGACATCGAGTTTTGACATGATGCTATTCGC
TCAGAATCTGCTGATCGATGGGGAAGCTCTATACCGGGCCAGGGTCCTTG
AACTTGGAGATGAGTGGCCATGCCTCCCAGGCGTACAAGCTTCCGGCAAT
CCTCCTTTTCCTTTAGAATATTCCCCTGAAGAAGTCAGTTCAATTGAGGA
AGATGCGAATGGGGCAACCAGAAGCATGGCATTGATGCAAGGTGTGAAAG
AGTCACTGGGTGAGCTGTGGCCAGAGAAAGGTATTGTGCCGCCTGAGCGG
TATGATGACGCCCGGAAACTTTTAAAACAGGTCAAAACAGAATTAATTGA
TCAGCTTGCACAATCAGACGCAGAAAGACTTGAGTGGGAAAAAGCATGGC
CGTTTGATGACTGAATGTTCCGGCGGATTATTCCATCGCTGAGGAATCGA
GGGAAAATGTCGCCGCATCCCGACCGTCTATCGAACACCAATCTCGGCAA
GTCATTCCATACAGATTGGAATACAATCCATGACTGGCATAGCTATACAA
GGGGTCGCTTCCTTTTGAATGAAGCTCATGAACTGAGAATTCGTCGCGCT
GATTTCAATATGAATGAATTGGCCAAGTGTGCGGCCGAAGCGGTCGGCTT
TACGTTTTCAGACTGTGTTCGTATCGAGAAGTTCTCGGATGGAATGTTTA
ATAAAGCCTTCCTATTCACGATGCAGGATGGGACGCAGGTTGTAGGTAAA
GTGCCCAATCCAAACGCTGGACGGCCTCACTACACCACTGCTAGCGAAGT
GGCAACGATGGATTTCGTAAGGAACGAGCTGAGCACTCCAGTGCCGAAAG
TATTAGCCTGGAGTTCAAAAGCAGATGGCAACCCAGTTGGTTCAGAATAC
ATCATCATGGAGAAGGTTGGGGGTGTTCAACTTGATAAAATATGGCCACA
GATGGACATCAAGAAGAGGTTCGAACTCATCAAAACAATTTCTAGGTACC
AAAAGGCATGGATGTCAAAATCCTTTACCCAGTACGGGAGTCTCTATTTC
TCAAGCGATCTGCAAGACCACCGTGGATGCATCATTGTGAATGAAGACGG
GTCTCAATCCGAATATGATCGTTTTGCCATTGGTCCAACAACAGGAAGAG
AGTTTCTTGACGACGGTAGGATTGACGTGGACTTCGATCGGGGCCCATGG
AATGATTTGCTTTCATACAAATCAGCAATTGGCTTTCGAGAACTTGCCTG
TGTACAAAATATGACTCAGCTACCCCGGTCACTTCTTGGGCTCTACGGTC
CCGGTACATACCAACCTTCACGTCCCAAAAAGGTAGCTGCTATCCAGGAC
TATCTCAGTCTGGTGCAGTTCTTTCTTCCCACTGACGACTCGATTTGTTC
CGCATTCTTATGGCATCCTGATCTCCACACCGAAAATATATTTGTCGACC
CCGACAGGCCGTCAGAAGTCTTAGGCATTATTGACTGGCAATCCAGTGAA
GTTCTACCATTGTTTGATCATGCGCGTCAGCCATACCTTCTTGACTATGA
TGGTCCTCCGGCAACTGGCCTTGATCCACCAGAATTTCCTGAGAACTTTG
ATCAGCTTGATCCTCCTGAGAAAGCAAAGGCCGAAAGGTTGTATCTGAAT
ATATCACTTGCGACTCTTTATAGGAAGCTCACTTATGCCAAAAACAAGAA
ATTGTTCGGAGCCATGGAATTTCAGCAGACATCGAGTTTTGACATGATGC
TATTCGCTCAGAATCTGCTGATCGATGGGGAAGCTCTATACCGGGCCAGG
GTCCTTGAACTTGGAGATGAGTGGCCATGCCTCCCAGGCGTACAAGCTTC
CGGCAATCCTCCTTTTCCTTTAGAATATTCCCCTGAAGAAGTCAGTTCAA
TTGAGGAAGATGCGAATGGGGCAACCAGAAGCATGGCATTGATGCAAGGT
GTGAAAGAGTCACTGGGTGAGCTGTGGCCAGAGAAAGGTATTGTGCCGCC
TGAGCGGTATGATGACGCCCGGAAACTTTTAAAACAGGTCAAAACAGAAT
TAATTGATCAGCTTGCACAATCAGACGCAGAAAGACTTGAGTGGGAAAAA
GCATGGCCGTTTGATGACTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000989-T1.utr5p1 | KJC3_000989-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000989-T1.utr3p1 | KJC3_000989-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2505329..2507433 + |
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