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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2507827..2509800+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000990-T1 ID=KJC3_000990-T1|Name=KJC3_000990-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1974bp|location=Sequence derived from alignment at ch1:2507827..2509800+ (Aspergillus niger KJC3)
AATAAGTACCTGTGGGGCAGTACCCCTGCCGTTGATGTTCTTCAACTCGA
ATCAAATGAAGGGACTCGCTATGACGGCGACCTTCGTCTCTTATTTGCCG
GTGTGTTTAATTTGTATTTTCTATATGAAGGCGATAGTTGACCAAACATT
TTGTTGCCTCAGCTTCAGGAGACCTCCGGAATTTTATTCAGACAATTGCT
CGGATTCCGGGGAGCTATGATCGTTCACTTGAGGTTACAATCGACGATAA
CGACTCTGACGTTGTGGCCCGCAACATCATCATGCTCCTTCTCCTCCAAG
GAACGGGAAACGGCGATGCAGTAGTCGATTGCATCATTCATCTTCTGGTA
CTCAGCTTTTGTACGCGAATCCGACATGGAGCTGCTTGGACGACGTGTAC
GTCCTTTGATTGAGGACTTCTGCCGAAAGGTAAAGGATGCCACACCAGGA
AGCCTCATACCCAATACGTGGAAATTTGGGCAGCGCTCTTTGAGAGTCAT
TCTAGACAAGGAATCTTGGTCTCGCCTCTTGACTTATTTCGATGTACCGA
CAGGCTTGACGGTTGAACGCGCGCGAAGCATCCGTACAGCCAACAGTTTA
GCTGAATTGAGAATAGCCTTTCGTGAATATTATATGTCCTGTTTGCCACC
TTCCCACCGCATCGCTTTTCACAAATTTCGGGAAGATGGCCTCCTGCTCC
CCTTTGGACATCCGCGCCATGAATTTCGTGTGCCGAACCCGTAAGTCGAT
AATAGACGTATATTACGTCATGATGCTGACGGTCAGCAGCACACTCTTTC
ATAGCCGTGATATCTGGCCAGTCAGGGACAATGCAGACCCTAGAGAGGGC
TGGGAATGGAAACAAGTTCACGATACGTCAAGCGGGCCTGCAACTGCTGA
CATTTACGGGAAACTATTCTACCATGTTCGCGGTGTCCTTCAGTCTTTTC
TCTGCCGTGTTTCGGATTTGGAACTTTCGCTCACACTCCATCATCTCGAT
GCCCTGGAACTCCCGAATTACCTTCCCGTCAATCATTTCGATCGGGTCGA
TGTAAGACACACTCCTTGCCTCTTGGTGGAAGTTTGTGCTTACCCAGTAT
GGGCAAGTTCAGTCTACTTAGGCTGCATTTGTTCAGAGATAAGGTTTCGT
GGAGGGTGCTAACTGGCTCTGTACAGGTATCCAACGTTTCGGACCAAGGG
TATCTGGGGATCCACAGAACGCTAAACGCGACGGTGCCCTTGCTCCAAAC
CCCTGTAGATAATCCGCATGCTACCCTTATCACATTCTTTCTCAATGCTG
TTAATGAGACCTTGACCGCCCAGGATAAAGCGAAAGAGACGTTCGAGCTT
CATACCAATAAGCACCTCTCCGGATACCTGCCCTCCGAGGAGCAGTCAAT
TATCACTCAATGTAATAAAATTGGCCAATTGATAACAGTGCAGGCCATGA
TCAAAGACTATAGCCACGTTTTTGAACGGCAAGTTGGAATCCAATGAAAC
ATCAAAGAAGATGGTTCATACCGCTGACACGTGAACAATAGTTATATAGT
CAAGCACAGGATGCGTGAGGCTGCCAAATCGATGGGGACAGTGATGAAGC
AAAGCCATACCATCGTCGAAAAGTGGCCATTTAGAATGAAGCTCCAGCCC
GGCCAACCGGTAACACAAGCAGAGTTTGACCAATGCCTGGCTATAGGCGT
AACGGGGAAGGAGCGTTACATAGAATGGAAAAGGATACAACATGTCGCAA
ATTAGTAATACGGCACCTTGGATGGCCTTGGTCCGCGGCAGGGGTCATAT
TCAACAACTTGAACGTCAACTGAGTCTTCGAACGGATGATCGGCGCCACA
GATCTTCGCATGTCACAGGGCAAGTTTAGGGACAGTTTCGCGAGGAGTTG
TGTTGAAGGATGAGGTTGGGAAGCTAAATCGTGAAAATTTCTGGTCATGT
TTCCATCCATGATAATTTTTTACC back to topCoding sequence (CDS) from alignment at ch1:2507827..2509800+ >KJC3_000990-T1 ID=KJC3_000990-T1|Name=KJC3_000990-T1|organism=Aspergillus niger KJC3|type=CDS|length=4572bp|location=Sequence derived from alignment at ch1:2507827..2509800+ (Aspergillus niger KJC3)
ATGGAGCTGCTTGGACGACGTGTACGTCCTTTGATTGAGGACTTCTGCCG
AAAGGTAAAGGATGCCACACCAGGAAGCCTCATACCCAATACGTGGAAAT
TTGGGCAGCGCTCTTTGAGAGTCATTCTAGACAAGGAATCTTGGTCTCGC
CTCTTGACTTATTTCGATGTACCGACAGGCTTGACGGTTGAACGCGCGCG
AAGCATCCGTACAGCCAACAGTTTAGCTGAATTGAGAATAGCCTTTCGTG
AATATTATATGTCCTGTTTGCCACCTTCCCACCGCATCGCTTTTCACAAA
TTTCGGGAAGATGGCCTCCTGCTCCCCTTTGGACATCCGCGCCATGAATT
TCGTGTGCCGAACCCCACACTCTTTCATAGCCGTGATATCTGGCCAGTCA
GGGACAATGCAGACCCTAGAGAGGGCTGGGAATGGAAACAAGTTCACGAT
ACGTCAAGCGGGCCTGCAACTGCTGACATTTACGGGAAACTATTCTACCA
TGTTCGCGGTGTCCTTCAGTCTTTTCTCTGCCGTGTTTCGGATTTGGAAC
TTTCGCTCACACTCCATCATCTCGATGCCCTGGAACTCCCGAATTACCTT
CCCGTCAATCATTTCGATCGGGTCGATGTATCCAACGTTTCGGACCAAGG
GTATCTGGGGATCCACAGAACGCTAAACGCGACGGTGCCCTTGCTCCAAA
CCCCTGTAGATAATCCGCATGCTACCCTTATCACATTCTTTCTCAATGCT
GTTAATGAGACCTTGACCGCCCAGGATAAAGCGAAAGAGACGTTCGAGCT
TCATACCAATAAGCACCTCTCCGGATACCTGCCCTCCGAGGAGCAGTCAA
TTATCACTCAATGTAATAAAATTGGCCAATTGATAACAGTGCAGGCCATG
ATCAAAGACTATAGCCACGTTTTTGAACGTTATATAGTCAAGCACAGGAT
GCGTGAGGCTGCCAAATCGATGGGGACAGTGATGAAGCAAAGCCATACCA
TCGTCGAAAAGTGGCCATTTAGAATGAAGCTCCAGCCCGGCCAACCGGTA
ACACAAGCAGAGTTTGACCAATGCCTGGCTATAGGCGTAACGGGGAAGGA
GCGTTACATAGAATGGAAAAGGATACAACATGTCGCAAATTAGATGGAGC
TGCTTGGACGACGTGTACGTCCTTTGATTGAGGACTTCTGCCGAAAGGTA
AAGGATGCCACACCAGGAAGCCTCATACCCAATACGTGGAAATTTGGGCA
GCGCTCTTTGAGAGTCATTCTAGACAAGGAATCTTGGTCTCGCCTCTTGA
CTTATTTCGATGTACCGACAGGCTTGACGGTTGAACGCGCGCGAAGCATC
CGTACAGCCAACAGTTTAGCTGAATTGAGAATAGCCTTTCGTGAATATTA
TATGTCCTGTTTGCCACCTTCCCACCGCATCGCTTTTCACAAATTTCGGG
AAGATGGCCTCCTGCTCCCCTTTGGACATCCGCGCCATGAATTTCGTGTG
CCGAACCCCACACTCTTTCATAGCCGTGATATCTGGCCAGTCAGGGACAA
TGCAGACCCTAGAGAGGGCTGGGAATGGAAACAAGTTCACGATACGTCAA
GCGGGCCTGCAACTGCTGACATTTACGGGAAACTATTCTACCATGTTCGC
GGTGTCCTTCAGTCTTTTCTCTGCCGTGTTTCGGATTTGGAACTTTCGCT
CACACTCCATCATCTCGATGCCCTGGAACTCCCGAATTACCTTCCCGTCA
ATCATTTCGATCGGGTCGATGTATCCAACGTTTCGGACCAAGGGTATCTG
GGGATCCACAGAACGCTAAACGCGACGGTGCCCTTGCTCCAAACCCCTGT
AGATAATCCGCATGCTACCCTTATCACATTCTTTCTCAATGCTGTTAATG
AGACCTTGACCGCCCAGGATAAAGCGAAAGAGACGTTCGAGCTTCATACC
AATAAGCACCTCTCCGGATACCTGCCCTCCGAGGAGCAGTCAATTATCAC
TCAATGTAATAAAATTGGCCAATTGATAACAGTGCAGGCCATGATCAAAG
ACTATAGCCACGTTTTTGAACGTTATATAGTCAAGCACAGGATGCGTGAG
GCTGCCAAATCGATGGGGACAGTGATGAAGCAAAGCCATACCATCGTCGA
AAAGTGGCCATTTAGAATGAAGCTCCAGCCCGGCCAACCGGTAACACAAG
CAGAGTTTGACCAATGCCTGGCTATAGGCGTAACGGGGAAGGAGCGTTAC
ATAGAATGGAAAAGGATACAACATGTCGCAAATTAGATGGAGCTGCTTGG
ACGACGTGTACGTCCTTTGATTGAGGACTTCTGCCGAAAGGTAAAGGATG
CCACACCAGGAAGCCTCATACCCAATACGTGGAAATTTGGGCAGCGCTCT
TTGAGAGTCATTCTAGACAAGGAATCTTGGTCTCGCCTCTTGACTTATTT
CGATGTACCGACAGGCTTGACGGTTGAACGCGCGCGAAGCATCCGTACAG
CCAACAGTTTAGCTGAATTGAGAATAGCCTTTCGTGAATATTATATGTCC
TGTTTGCCACCTTCCCACCGCATCGCTTTTCACAAATTTCGGGAAGATGG
CCTCCTGCTCCCCTTTGGACATCCGCGCCATGAATTTCGTGTGCCGAACC
CCACACTCTTTCATAGCCGTGATATCTGGCCAGTCAGGGACAATGCAGAC
CCTAGAGAGGGCTGGGAATGGAAACAAGTTCACGATACGTCAAGCGGGCC
TGCAACTGCTGACATTTACGGGAAACTATTCTACCATGTTCGCGGTGTCC
TTCAGTCTTTTCTCTGCCGTGTTTCGGATTTGGAACTTTCGCTCACACTC
CATCATCTCGATGCCCTGGAACTCCCGAATTACCTTCCCGTCAATCATTT
CGATCGGGTCGATGTATCCAACGTTTCGGACCAAGGGTATCTGGGGATCC
ACAGAACGCTAAACGCGACGGTGCCCTTGCTCCAAACCCCTGTAGATAAT
CCGCATGCTACCCTTATCACATTCTTTCTCAATGCTGTTAATGAGACCTT
GACCGCCCAGGATAAAGCGAAAGAGACGTTCGAGCTTCATACCAATAAGC
ACCTCTCCGGATACCTGCCCTCCGAGGAGCAGTCAATTATCACTCAATGT
AATAAAATTGGCCAATTGATAACAGTGCAGGCCATGATCAAAGACTATAG
CCACGTTTTTGAACGTTATATAGTCAAGCACAGGATGCGTGAGGCTGCCA
AATCGATGGGGACAGTGATGAAGCAAAGCCATACCATCGTCGAAAAGTGG
CCATTTAGAATGAAGCTCCAGCCCGGCCAACCGGTAACACAAGCAGAGTT
TGACCAATGCCTGGCTATAGGCGTAACGGGGAAGGAGCGTTACATAGAAT
GGAAAAGGATACAACATGTCGCAAATTAGATGGAGCTGCTTGGACGACGT
GTACGTCCTTTGATTGAGGACTTCTGCCGAAAGGTAAAGGATGCCACACC
AGGAAGCCTCATACCCAATACGTGGAAATTTGGGCAGCGCTCTTTGAGAG
TCATTCTAGACAAGGAATCTTGGTCTCGCCTCTTGACTTATTTCGATGTA
CCGACAGGCTTGACGGTTGAACGCGCGCGAAGCATCCGTACAGCCAACAG
TTTAGCTGAATTGAGAATAGCCTTTCGTGAATATTATATGTCCTGTTTGC
CACCTTCCCACCGCATCGCTTTTCACAAATTTCGGGAAGATGGCCTCCTG
CTCCCCTTTGGACATCCGCGCCATGAATTTCGTGTGCCGAACCCCACACT
CTTTCATAGCCGTGATATCTGGCCAGTCAGGGACAATGCAGACCCTAGAG
AGGGCTGGGAATGGAAACAAGTTCACGATACGTCAAGCGGGCCTGCAACT
GCTGACATTTACGGGAAACTATTCTACCATGTTCGCGGTGTCCTTCAGTC
TTTTCTCTGCCGTGTTTCGGATTTGGAACTTTCGCTCACACTCCATCATC
TCGATGCCCTGGAACTCCCGAATTACCTTCCCGTCAATCATTTCGATCGG
GTCGATGTATCCAACGTTTCGGACCAAGGGTATCTGGGGATCCACAGAAC
GCTAAACGCGACGGTGCCCTTGCTCCAAACCCCTGTAGATAATCCGCATG
CTACCCTTATCACATTCTTTCTCAATGCTGTTAATGAGACCTTGACCGCC
CAGGATAAAGCGAAAGAGACGTTCGAGCTTCATACCAATAAGCACCTCTC
CGGATACCTGCCCTCCGAGGAGCAGTCAATTATCACTCAATGTAATAAAA
TTGGCCAATTGATAACAGTGCAGGCCATGATCAAAGACTATAGCCACGTT
TTTGAACGTTATATAGTCAAGCACAGGATGCGTGAGGCTGCCAAATCGAT
GGGGACAGTGATGAAGCAAAGCCATACCATCGTCGAAAAGTGGCCATTTA
GAATGAAGCTCCAGCCCGGCCAACCGGTAACACAAGCAGAGTTTGACCAA
TGCCTGGCTATAGGCGTAACGGGGAAGGAGCGTTACATAGAATGGAAAAG
GATACAACATGTCGCAAATTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_000990-T1.utr3p1 | KJC3_000990-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2507827..2509800 + |
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