You are here

Home

KJC3_000990-T2, KJC3_000990-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_000990-T2
Unique NameKJC3_000990-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2507827..2509800+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_000990-T2 ID=KJC3_000990-T2|Name=KJC3_000990-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1974bp|location=Sequence derived from alignment at ch1:2507827..2509800+ (Aspergillus niger KJC3)
AATAAGTACCTGTGGGGCAGTACCCCTGCCGTTGATGTTCTTCAACTCGA
ATCAAATGAAGGGACTCGCTATGACGGCGACCTTCGTCTCTTATTTGCCG
GTGTGTTTAATTTGTATTTTCTATATGAAGGCGATAGTTGACCAAACATT
TTGTTGCCTCAGCTTCAGGAGACCTCCGGAATTTTATTCAGACAATTGCT
CGGATTCCGGGGAGCTATGATCGTTCACTTGAGGTTACAATCGACGATAA
CGACTCTGACGTTGTGGCCCGCAACATCATCATGCTCCTTCTCCTCCAAG
GAACGGGAAACGGCGATGCAGTAGTCGATTGCATCATTCATCTTCTGGTA
CTCAGCTTTTGTACGCGAATCCGACATGGAGCTGCTTGGACGACGTGTAC
GTCCTTTGATTGAGGACTTCTGCCGAAAGGTAAAGGATGCCACACCAGGA
AGCCTCATACCCAATACGTGGAAATTTGGGCAGCGCTCTTTGAGAGTCAT
TCTAGACAAGGAATCTTGGTCTCGCCTCTTGACTTATTTCGATGTACCGA
CAGGCTTGACGGTTGAACGCGCGCGAAGCATCCGTACAGCCAACAGTTTA
GCTGAATTGAGAATAGCCTTTCGTGAATATTATATGTCCTGTTTGCCACC
TTCCCACCGCATCGCTTTTCACAAATTTCGGGAAGATGGCCTCCTGCTCC
CCTTTGGACATCCGCGCCATGAATTTCGTGTGCCGAACCCGTAAGTCGAT
AATAGACGTATATTACGTCATGATGCTGACGGTCAGCAGCACACTCTTTC
ATAGCCGTGATATCTGGCCAGTCAGGGACAATGCAGACCCTAGAGAGGGC
TGGGAATGGAAACAAGTTCACGATACGTCAAGCGGGCCTGCAACTGCTGA
CATTTACGGGAAACTATTCTACCATGTTCGCGGTGTCCTTCAGTCTTTTC
TCTGCCGTGTTTCGGATTTGGAACTTTCGCTCACACTCCATCATCTCGAT
GCCCTGGAACTCCCGAATTACCTTCCCGTCAATCATTTCGATCGGGTCGA
TGTAAGACACACTCCTTGCCTCTTGGTGGAAGTTTGTGCTTACCCAGTAT
GGGCAAGTTCAGTCTACTTAGGCTGCATTTGTTCAGAGATAAGGTTTCGT
GGAGGGTGCTAACTGGCTCTGTACAGGTATCCAACGTTTCGGACCAAGGG
TATCTGGGGATCCACAGAACGCTAAACGCGACGGTGCCCTTGCTCCAAAC
CCCTGTAGATAATCCGCATGCTACCCTTATCACATTCTTTCTCAATGCTG
TTAATGAGACCTTGACCGCCCAGGATAAAGCGAAAGAGACGTTCGAGCTT
CATACCAATAAGCACCTCTCCGGATACCTGCCCTCCGAGGAGCAGTCAAT
TATCACTCAATGTAATAAAATTGGCCAATTGATAACAGTGCAGGCCATGA
TCAAAGACTATAGCCACGTTTTTGAACGGCAAGTTGGAATCCAATGAAAC
ATCAAAGAAGATGGTTCATACCGCTGACACGTGAACAATAGTTATATAGT
CAAGCACAGGATGCGTGAGGCTGCCAAATCGATGGGGACAGTGATGAAGC
AAAGCCATACCATCGTCGAAAAGTGGCCATTTAGAATGAAGCTCCAGCCC
GGCCAACCGGTAACACAAGCAGAGTTTGACCAATGCCTGGCTATAGGCGT
AACGGGGAAGGAGCGTTACATAGAATGGAAAAGGATACAACATGTCGCAA
ATTAGTAATACGGCACCTTGGATGGCCTTGGTCCGCGGCAGGGGTCATAT
TCAACAACTTGAACGTCAACTGAGTCTTCGAACGGATGATCGGCGCCACA
GATCTTCGCATGTCACAGGGCAAGTTTAGGGACAGTTTCGCGAGGAGTTG
TGTTGAAGGATGAGGTTGGGAAGCTAAATCGTGAAAATTTCTGGTCATGT
TTCCATCCATGATAATTTTTTACC
back to top

Coding sequence (CDS) from alignment at ch1:2507827..2509800+

>KJC3_000990-T2 ID=KJC3_000990-T2|Name=KJC3_000990-T2|organism=Aspergillus niger KJC3|type=CDS|length=3540bp|location=Sequence derived from alignment at ch1:2507827..2509800+ (Aspergillus niger KJC3)
ATGTCCTGTTTGCCACCTTCCCACCGCATCGCTTTTCACAAATTTCGGGA
AGATGGCCTCCTGCTCCCCTTTGGACATCCGCGCCATGAATTTCGTGTGC
CGAACCCCACACTCTTTCATAGCCGTGATATCTGGCCAGTCAGGGACAAT
GCAGACCCTAGAGAGGGCTGGGAATGGAAACAAGTTCACGATACGTCAAG
CGGGCCTGCAACTGCTGACATTTACGGGAAACTATTCTACCATGTTCGCG
GTGTCCTTCAGTCTTTTCTCTGCCGTGTTTCGGATTTGGAACTTTCGCTC
ACACTCCATCATCTCGATGCCCTGGAACTCCCGAATTACCTTCCCGTCAA
TCATTTCGATCGGGTCGATGTATCCAACGTTTCGGACCAAGGGTATCTGG
GGATCCACAGAACGCTAAACGCGACGGTGCCCTTGCTCCAAACCCCTGTA
GATAATCCGCATGCTACCCTTATCACATTCTTTCTCAATGCTGTTAATGA
GACCTTGACCGCCCAGGATAAAGCGAAAGAGACGTTCGAGCTTCATACCA
ATAAGCACCTCTCCGGATACCTGCCCTCCGAGGAGCAGTCAATTATCACT
CAATGTAATAAAATTGGCCAATTGATAACAGTGCAGGCCATGATCAAAGA
CTATAGCCACGTTTTTGAACGTTATATAGTCAAGCACAGGATGCGTGAGG
CTGCCAAATCGATGGGGACAGTGATGAAGCAAAGCCATACCATCGTCGAA
AAGTGGCCATTTAGAATGAAGCTCCAGCCCGGCCAACCGGTAACACAAGC
AGAGTTTGACCAATGCCTGGCTATAGGCGTAACGGGGAAGGAGCGTTACA
TAGAATGGAAAAGGATACAACATGTCGCAAATTAGATGTCCTGTTTGCCA
CCTTCCCACCGCATCGCTTTTCACAAATTTCGGGAAGATGGCCTCCTGCT
CCCCTTTGGACATCCGCGCCATGAATTTCGTGTGCCGAACCCCACACTCT
TTCATAGCCGTGATATCTGGCCAGTCAGGGACAATGCAGACCCTAGAGAG
GGCTGGGAATGGAAACAAGTTCACGATACGTCAAGCGGGCCTGCAACTGC
TGACATTTACGGGAAACTATTCTACCATGTTCGCGGTGTCCTTCAGTCTT
TTCTCTGCCGTGTTTCGGATTTGGAACTTTCGCTCACACTCCATCATCTC
GATGCCCTGGAACTCCCGAATTACCTTCCCGTCAATCATTTCGATCGGGT
CGATGTATCCAACGTTTCGGACCAAGGGTATCTGGGGATCCACAGAACGC
TAAACGCGACGGTGCCCTTGCTCCAAACCCCTGTAGATAATCCGCATGCT
ACCCTTATCACATTCTTTCTCAATGCTGTTAATGAGACCTTGACCGCCCA
GGATAAAGCGAAAGAGACGTTCGAGCTTCATACCAATAAGCACCTCTCCG
GATACCTGCCCTCCGAGGAGCAGTCAATTATCACTCAATGTAATAAAATT
GGCCAATTGATAACAGTGCAGGCCATGATCAAAGACTATAGCCACGTTTT
TGAACGTTATATAGTCAAGCACAGGATGCGTGAGGCTGCCAAATCGATGG
GGACAGTGATGAAGCAAAGCCATACCATCGTCGAAAAGTGGCCATTTAGA
ATGAAGCTCCAGCCCGGCCAACCGGTAACACAAGCAGAGTTTGACCAATG
CCTGGCTATAGGCGTAACGGGGAAGGAGCGTTACATAGAATGGAAAAGGA
TACAACATGTCGCAAATTAGATGTCCTGTTTGCCACCTTCCCACCGCATC
GCTTTTCACAAATTTCGGGAAGATGGCCTCCTGCTCCCCTTTGGACATCC
GCGCCATGAATTTCGTGTGCCGAACCCCACACTCTTTCATAGCCGTGATA
TCTGGCCAGTCAGGGACAATGCAGACCCTAGAGAGGGCTGGGAATGGAAA
CAAGTTCACGATACGTCAAGCGGGCCTGCAACTGCTGACATTTACGGGAA
ACTATTCTACCATGTTCGCGGTGTCCTTCAGTCTTTTCTCTGCCGTGTTT
CGGATTTGGAACTTTCGCTCACACTCCATCATCTCGATGCCCTGGAACTC
CCGAATTACCTTCCCGTCAATCATTTCGATCGGGTCGATGTATCCAACGT
TTCGGACCAAGGGTATCTGGGGATCCACAGAACGCTAAACGCGACGGTGC
CCTTGCTCCAAACCCCTGTAGATAATCCGCATGCTACCCTTATCACATTC
TTTCTCAATGCTGTTAATGAGACCTTGACCGCCCAGGATAAAGCGAAAGA
GACGTTCGAGCTTCATACCAATAAGCACCTCTCCGGATACCTGCCCTCCG
AGGAGCAGTCAATTATCACTCAATGTAATAAAATTGGCCAATTGATAACA
GTGCAGGCCATGATCAAAGACTATAGCCACGTTTTTGAACGTTATATAGT
CAAGCACAGGATGCGTGAGGCTGCCAAATCGATGGGGACAGTGATGAAGC
AAAGCCATACCATCGTCGAAAAGTGGCCATTTAGAATGAAGCTCCAGCCC
GGCCAACCGGTAACACAAGCAGAGTTTGACCAATGCCTGGCTATAGGCGT
AACGGGGAAGGAGCGTTACATAGAATGGAAAAGGATACAACATGTCGCAA
ATTAGATGTCCTGTTTGCCACCTTCCCACCGCATCGCTTTTCACAAATTT
CGGGAAGATGGCCTCCTGCTCCCCTTTGGACATCCGCGCCATGAATTTCG
TGTGCCGAACCCCACACTCTTTCATAGCCGTGATATCTGGCCAGTCAGGG
ACAATGCAGACCCTAGAGAGGGCTGGGAATGGAAACAAGTTCACGATACG
TCAAGCGGGCCTGCAACTGCTGACATTTACGGGAAACTATTCTACCATGT
TCGCGGTGTCCTTCAGTCTTTTCTCTGCCGTGTTTCGGATTTGGAACTTT
CGCTCACACTCCATCATCTCGATGCCCTGGAACTCCCGAATTACCTTCCC
GTCAATCATTTCGATCGGGTCGATGTATCCAACGTTTCGGACCAAGGGTA
TCTGGGGATCCACAGAACGCTAAACGCGACGGTGCCCTTGCTCCAAACCC
CTGTAGATAATCCGCATGCTACCCTTATCACATTCTTTCTCAATGCTGTT
AATGAGACCTTGACCGCCCAGGATAAAGCGAAAGAGACGTTCGAGCTTCA
TACCAATAAGCACCTCTCCGGATACCTGCCCTCCGAGGAGCAGTCAATTA
TCACTCAATGTAATAAAATTGGCCAATTGATAACAGTGCAGGCCATGATC
AAAGACTATAGCCACGTTTTTGAACGTTATATAGTCAAGCACAGGATGCG
TGAGGCTGCCAAATCGATGGGGACAGTGATGAAGCAAAGCCATACCATCG
TCGAAAAGTGGCCATTTAGAATGAAGCTCCAGCCCGGCCAACCGGTAACA
CAAGCAGAGTTTGACCAATGCCTGGCTATAGGCGTAACGGGGAAGGAGCG
TTACATAGAATGGAAAAGGATACAACATGTCGCAAATTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_000990KJC3_000990Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000990-T2KJC3_000990-T2-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000990-T2.utr5p1KJC3_000990-T2.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_000990-T2.utr5p2KJC3_000990-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_000990-T2.utr5p3KJC3_000990-T2.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000990-T2.exon1KJC3_000990-T2.exon1Aspergillus niger KJC3exon
KJC3_000990-T2.exon2KJC3_000990-T2.exon2Aspergillus niger KJC3exon
KJC3_000990-T2.exon3KJC3_000990-T2.exon3Aspergillus niger KJC3exon
KJC3_000990-T2.exon4KJC3_000990-T2.exon4Aspergillus niger KJC3exon
KJC3_000990-T2.exon5KJC3_000990-T2.exon5Aspergillus niger KJC3exon
KJC3_000990-T2.exon6KJC3_000990-T2.exon6Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000990-T2.cdsKJC3_000990-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_000990-T2.utr3p1KJC3_000990-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2507827..2509800 +
Powered by Drupal