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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2522917..2524504- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_000993-T1 ID=KJC3_000993-T1|Name=KJC3_000993-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1588bp|location=Sequence derived from alignment at ch1:2522917..2524504- (Aspergillus niger KJC3)
ATGTCCCCGAGCTCGAAGCAAAACATCTTCATTTACGCTGATTTCGACCA
TGAAGCAGTGTGTCGTCGGGCGAGCACACTACGCCAGGGTATTCCATGTA
CATGTGATCTCAGTCAACGTCCTGCCTCAGGAAGCTTCAACTGGGCTATC
TTCATCCTTTTCGAGGATGGCGTACAATGGGTCTTTAGATCACCACACCA
GAGGACATCTATGCCTCTTGATCTTGGAGTGAAGCTACTAGCAAGTGAAG
CTGCTACGCTCCGATACCTCAAAGCCCATAGCGATATTCCGGTCCCAGAA
GTATATGACTATTGGTAATGCACCCCTCTGGACATATACTTCGAGCCTAA
CCTGTCACAGCGCATCGTCAGATAATGAAACCAAAGTTCCGTTCATGCTC
ATGAGCCAAGCACCTGGATGGCCCCTGTCAAAGGTTTGGGTAACAGCTGG
CTCTCCCCTACCTGACCTAGATCCTTCGAGAAAGGCCAGGGTCTTAACCC
AGTTAGGCGGTACCACCTGGAAGCTTTCGCAGTTGCGGCTTGATAGGATA
GGCTCACTTTTTGAAGAAGACGGAGCCTTCAAAATCAAGGGATGCCTATG
GCGCTGTTATATGTTACATGAGCGATTCTTGATAGAAGGCCAGCGTGGCC
CTTTTGCTACCGATGCAGAGTTCTACGACAGTCTTGTTTCCACATTCCTA
GAACAAGCAGAGTGTCTGCGCTTATCACACCATTGCTTTGTGGCTCCAGT
TCCTTCGAGAGAAGACTATGATTCCGACAAGCAACATCGACAAGCTGTAG
ATCTGTGGAATGACTTCGTCACTGTCGGAGGCAAGATTGATTCCGCAGAT
AACAGGCTGGATTACATCGTTGCAGGAAATGCTCTCCGCGATATTGTACA
CAAGCTTGAACACCCAACTGTTCATCAGGGGACTTTTCCGCTATGTCACG
CTGACCTCAGTGTCAATAACATCTATGTTGACGACGACTACAACATTACT
TGTATCATCGACTGGGCCTTTACATCTTCTGTTCCGGACTCCATGCTGTT
AGTCCCTCCCGGACTGCCACAATATGGCGACAAGATAAGCCCAGAGTTAC
ATGCGGCCTTCGTCGATGGCTTCCTGGCAGCTATTCCCGGATCAGCCGAA
ACGAGTATGGTGCGCAGGTACCGCGAAACGCTTGAACAAGGCCATTTCTA
CTGGAACCTGAGTCGACTACTCGGACTAGACTCCATCGGTGATTACAACC
TCTTTGCTACCGTTTGGCAATCTACCTCTGGCCCTGCAAAAGGCATTGGG
GAGTACTTCTTACAACAACGTCGCTTGCCTCGCTACCTCCAGCTTTATGA
TGAGGTTCAACAGGAGGACCGACCCCTGTGGAAAGTTGAAGGGGATGAGA
AAGACTATTTCCGGAACAACGTGTTCAAGCACACAATAGCCAAGAAAATG
ACGCTCATGTCCGAGTGGAAAGCAGAGTATGCAGCTGAGCCTCCGCGGAG
GATTCGACAAGATATGTTTGTCGCCTCTCCAAATCTGTGGAAGTGGGTTT
TGCAATTCATGGAGGACTGGGAGGAGAAGCTTCGATGA back to topCoding sequence (CDS) from alignment at ch1:2522917..2524504- >KJC3_000993-T1 ID=KJC3_000993-T1|Name=KJC3_000993-T1|organism=Aspergillus niger KJC3|type=CDS|length=3084bp|location=Sequence derived from alignment at ch1:2522917..2524504- (Aspergillus niger KJC3)
CGCATCGTCAGATAATGAAACCAAAGTTCCGTTCATGCTCATGAGCCAAG
CACCTGGATGGCCCCTGTCAAAGGTTTGGGTAACAGCTGGCTCTCCCCTA
CCTGACCTAGATCCTTCGAGAAAGGCCAGGGTCTTAACCCAGTTAGGCGG
TACCACCTGGAAGCTTTCGCAGTTGCGGCTTGATAGGATAGGCTCACTTT
TTGAAGAAGACGGAGCCTTCAAAATCAAGGGATGCCTATGGCGCTGTTAT
ATGTTACATGAGCGATTCTTGATAGAAGGCCAGCGTGGCCCTTTTGCTAC
CGATGCAGAGTTCTACGACAGTCTTGTTTCCACATTCCTAGAACAAGCAG
AGTGTCTGCGCTTATCACACCATTGCTTTGTGGCTCCAGTTCCTTCGAGA
GAAGACTATGATTCCGACAAGCAACATCGACAAGCTGTAGATCTGTGGAA
TGACTTCGTCACTGTCGGAGGCAAGATTGATTCCGCAGATAACAGGCTGG
ATTACATCGTTGCAGGAAATGCTCTCCGCGATATTGTACACAAGCTTGAA
CACCCAACTGTTCATCAGGGGACTTTTCCGCTATGTCACGCTGACCTCAG
TGTCAATAACATCTATGTTGACGACGACTACAACATTACTTGTATCATCG
ACTGGGCCTTTACATCTTCTGTTCCGGACTCCATGCTGTTAGTCCCTCCC
GGACTGCCACAATATGGCGACAAGATAAGCCCAGAGTTACATGCGGCCTT
CGTCGATGGCTTCCTGGCAGCTATTCCCGGATCAGCCGAAACGAGTATGG
TGCGCAGGTACCGCGAAACGCTTGAACAAGGCCATTTCTACTGGAACCTG
AGTCGACTACTCGGACTAGACTCCATCGGTGATTACAACCTCTTTGCTAC
CGTTTGGCAATCTACCTCTGGCCCTGCAAAAGGCATTGGGGAGTACTTCT
TACAACAACGTCGCTTGCCTCGCTACCTCCAGCTTTATGATGAGGTTCAA
CAGGAGGACCGACCCCTGTGGAAAGTTGAAGGGGATGAGAAAGACTATTT
CCGGAACAACGTGTTCAAGCACACAATAGCCAAGAAAATGACGCTCATGT
CCGAGTGGAAAGCAGAGTATGCAGCTGAGCCTCCGCGGAGGATTCGACAA
GATATGTTTGTCGCCTCTCCAAATCTGTGGAAGTGGGTTTTGCAATTCAT
GGAGGACTGGGAGGAGAAGCTTCGATGAATGTCCCCGAGCTCGAAGCAAA
ACATCTTCATTTACGCTGATTTCGACCATGAAGCAGTGTGTCGTCGGGCG
AGCACACTACGCCAGGGTATTCCATGTACATGTGATCTCAGTCAACGTCC
TGCCTCAGGAAGCTTCAACTGGGCTATCTTCATCCTTTTCGAGGATGGCG
TACAATGGGTCTTTAGATCACCACACCAGAGGACATCTATGCCTCTTGAT
CTTGGAGTGAAGCTACTAGCAAGTGAAGCTGCTACGCTCCGATACCTCAA
AGCCCATAGCGATATTCCGGTCCCAGAAGTATATGACTATTGCGCATCGT
CAGATAATGAAACCAAAGTTCCGTTCATGCTCATGAGCCAAGCACCTGGA
TGGCCCCTGTCAAAGGTTTGGGTAACAGCTGGCTCTCCCCTACCTGACCT
AGATCCTTCGAGAAAGGCCAGGGTCTTAACCCAGTTAGGCGGTACCACCT
GGAAGCTTTCGCAGTTGCGGCTTGATAGGATAGGCTCACTTTTTGAAGAA
GACGGAGCCTTCAAAATCAAGGGATGCCTATGGCGCTGTTATATGTTACA
TGAGCGATTCTTGATAGAAGGCCAGCGTGGCCCTTTTGCTACCGATGCAG
AGTTCTACGACAGTCTTGTTTCCACATTCCTAGAACAAGCAGAGTGTCTG
CGCTTATCACACCATTGCTTTGTGGCTCCAGTTCCTTCGAGAGAAGACTA
TGATTCCGACAAGCAACATCGACAAGCTGTAGATCTGTGGAATGACTTCG
TCACTGTCGGAGGCAAGATTGATTCCGCAGATAACAGGCTGGATTACATC
GTTGCAGGAAATGCTCTCCGCGATATTGTACACAAGCTTGAACACCCAAC
TGTTCATCAGGGGACTTTTCCGCTATGTCACGCTGACCTCAGTGTCAATA
ACATCTATGTTGACGACGACTACAACATTACTTGTATCATCGACTGGGCC
TTTACATCTTCTGTTCCGGACTCCATGCTGTTAGTCCCTCCCGGACTGCC
ACAATATGGCGACAAGATAAGCCCAGAGTTACATGCGGCCTTCGTCGATG
GCTTCCTGGCAGCTATTCCCGGATCAGCCGAAACGAGTATGGTGCGCAGG
TACCGCGAAACGCTTGAACAAGGCCATTTCTACTGGAACCTGAGTCGACT
ACTCGGACTAGACTCCATCGGTGATTACAACCTCTTTGCTACCGTTTGGC
AATCTACCTCTGGCCCTGCAAAAGGCATTGGGGAGTACTTCTTACAACAA
CGTCGCTTGCCTCGCTACCTCCAGCTTTATGATGAGGTTCAACAGGAGGA
CCGACCCCTGTGGAAAGTTGAAGGGGATGAGAAAGACTATTTCCGGAACA
ACGTGTTCAAGCACACAATAGCCAAGAAAATGACGCTCATGTCCGAGTGG
AAAGCAGAGTATGCAGCTGAGCCTCCGCGGAGGATTCGACAAGATATGTT
TGTCGCCTCTCCAAATCTGTGGAAGTGGGTTTTGCAATTCATGGAGGACT
GGGAGGAGAAGCTTCGATGAATGTCCCCGAGCTCGAAGCAAAACATCTTC
ATTTACGCTGATTTCGACCATGAAGCAGTGTGTCGTCGGGCGAGCACACT
ACGCCAGGGTATTCCATGTACATGTGATCTCAGTCAACGTCCTGCCTCAG
GAAGCTTCAACTGGGCTATCTTCATCCTTTTCGAGGATGGCGTACAATGG
GTCTTTAGATCACCACACCAGAGGACATCTATGCCTCTTGATCTTGGAGT
GAAGCTACTAGCAAGTGAAGCTGCTACGCTCCGATACCTCAAAGCCCATA
GCGATATTCCGGTCCCAGAAGTATATGACTATTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011009 |
| DBxref | InterPro:IPR002575 |
| DBxref | PFAM:PF01636 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2522917..2524504 - |
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