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KJC3_001000-T1, KJC3_001000-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001000-T1
Unique NameKJC3_001000-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2541264..2542496+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001000-T1 ID=KJC3_001000-T1|Name=KJC3_001000-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1233bp|location=Sequence derived from alignment at ch1:2541264..2542496+ (Aspergillus niger KJC3)
CATCCTCCGTGCCTGTCAGCACTATCCATACCCGCATACGCATCCAGCTG
ATCCTTCACAGAATTAGGCATAACCGCCGAGCAGCAACCACATGCTCTGC
TGTCCTTCCTATCGCCCCACCGCTACCGTTCCTCTGCCGATCTCTGAAGA
TACTTGCCTATAGTAGAGATGGACATAAAAGGAGCTCCCCTTTCCCCTCA
TCCTCATGCCACATTTTCCAAACAAAACACCCAAAAGTAAGGAATAAAGA
AAAAAAACAAAGAAACCAAAGAAACCAACACAATGTCCCTCCGCACCCTC
CTCCTCGCCGCATCCACCCTCTCCGCCACCGCAGCAGCAGCAGCAGCAGG
CAAACACCGCCTGCACGCGCGCGACTGGATCGCCAGCGACGAAATCGTCG
GCTTCAACCAGACCGTCCCGGACAACTCCACCGGCGAGCTCTACCTCGCC
TACCAGCCCTACCTGAAGGTCGTGAACGGATGTGTCCCGTTCCCGGGTGT
TGACGCCGAAGGCGATACCGAGTATGTTCCCTACCCCCCCAATACCTCCC
CTACTACTTTAATATCCCCCCAAGAAAATCCTCCTAATAAGCGATAAACA
ATGGAATAGTGCCGGCCTCGCCCCCACCGGCGCCAGCGACGGCGACTGCA
GCTCGAACACGGGCCAAATCTACGTGCGCAGCAACATCACCTCCACCTCC
TCCACCTCGACCTACCCGACAGCACTGCTCTACAGCTGGTACATGCCCAA
AGACGAACCCAGCGACGGTCTCGGTCACCGACACGACTGGGAGGGCGTGA
TCATCTACCTGTCTGACGCGACCACCATCTCCGCGGATAATATCTTGGCT
GTGTGTCCGTCTGCGCATGGCGGGTGGGATTGCTCCACGGATGGGTATAC
CCTTGAGGGTACGAAGGCGCTGATCAAGTATGAGAGTATCTGGCCGCTGG
ATCATAGTTGTGGGTTGACGGATGTGGTGGGTGGTACGCAGCCGTTGGTT
GCGTGGGAGAGTTTGACTACGGCGGCGAGGGATGCGTTGCAGACGGCGGA
CTTTGATAAGGCTATTGTGCCGTTTAAGGATAGTACTTTTGATGAGAATC
TTGCTAAAGCTACTTACTAGTATTACTAGTTTAAGAAAACTAGTGAACTA
GGGTGATGGAGGGGGGAGGGGAAGTGTGAGGGTGTTGTAAATACTTTGTG
ATAGTTTATATATATGAGGAAGTTGTATTTGAG
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Coding sequence (CDS) from alignment at ch1:2541264..2542496+

>KJC3_001000-T1 ID=KJC3_001000-T1|Name=KJC3_001000-T1|organism=Aspergillus niger KJC3|type=CDS|length=1500bp|location=Sequence derived from alignment at ch1:2541264..2542496+ (Aspergillus niger KJC3)
ATGTCCCTCCGCACCCTCCTCCTCGCCGCATCCACCCTCTCCGCCACCGC
AGCAGCAGCAGCAGCAGGCAAACACCGCCTGCACGCGCGCGACTGGATCG
CCAGCGACGAAATCGTCGGCTTCAACCAGACCGTCCCGGACAACTCCACC
GGCGAGCTCTACCTCGCCTACCAGCCCTACCTGAAGGTCGTGAACGGATG
TGTCCCGTTCCCGGGTGTTGACGCCGAAGGCGATACCGATGCCGGCCTCG
CCCCCACCGGCGCCAGCGACGGCGACTGCAGCTCGAACACGGGCCAAATC
TACGTGCGCAGCAACATCACCTCCACCTCCTCCACCTCGACCTACCCGAC
AGCACTGCTCTACAGCTGGTACATGCCCAAAGACGAACCCAGCGACGGTC
TCGGTCACCGACACGACTGGGAGGGCGTGATCATCTACCTGTCTGACGCG
ACCACCATCTCCGCGGATAATATCTTGGCTGTGTGTCCGTCTGCGCATGG
CGGGTGGGATTGCTCCACGGATGGGTATACCCTTGAGGGTACGAAGGCGC
TGATCAAGTATGAGAGTATCTGGCCGCTGGATCATAGTTGTGGGTTGACG
GATGTGGTGGGTGGTACGCAGCCGTTGGTTGCGTGGGAGAGTTTGACTAC
GGCGGCGAGGGATGCGTTGCAGACGGCGGACTTTGATAAGGCTATTGTGC
CGTTTAAGGATAGTACTTTTGATGAGAATCTTGCTAAAGCTACTTACTAG
ATGTCCCTCCGCACCCTCCTCCTCGCCGCATCCACCCTCTCCGCCACCGC
AGCAGCAGCAGCAGCAGGCAAACACCGCCTGCACGCGCGCGACTGGATCG
CCAGCGACGAAATCGTCGGCTTCAACCAGACCGTCCCGGACAACTCCACC
GGCGAGCTCTACCTCGCCTACCAGCCCTACCTGAAGGTCGTGAACGGATG
TGTCCCGTTCCCGGGTGTTGACGCCGAAGGCGATACCGATGCCGGCCTCG
CCCCCACCGGCGCCAGCGACGGCGACTGCAGCTCGAACACGGGCCAAATC
TACGTGCGCAGCAACATCACCTCCACCTCCTCCACCTCGACCTACCCGAC
AGCACTGCTCTACAGCTGGTACATGCCCAAAGACGAACCCAGCGACGGTC
TCGGTCACCGACACGACTGGGAGGGCGTGATCATCTACCTGTCTGACGCG
ACCACCATCTCCGCGGATAATATCTTGGCTGTGTGTCCGTCTGCGCATGG
CGGGTGGGATTGCTCCACGGATGGGTATACCCTTGAGGGTACGAAGGCGC
TGATCAAGTATGAGAGTATCTGGCCGCTGGATCATAGTTGTGGGTTGACG
GATGTGGTGGGTGGTACGCAGCCGTTGGTTGCGTGGGAGAGTTTGACTAC
GGCGGCGAGGGATGCGTTGCAGACGGCGGACTTTGATAAGGCTATTGTGC
CGTTTAAGGATAGTACTTTTGATGAGAATCTTGCTAAAGCTACTTACTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001000KJC3_001000Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001000-T1.utr5p1KJC3_001000-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001000-T1.exon1KJC3_001000-T1.exon1Aspergillus niger KJC3exon
KJC3_001000-T1.exon2KJC3_001000-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001000-T1.cdsKJC3_001000-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001000-T1.utr3p1KJC3_001000-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001000-T1KJC3_001000-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-22)
DBxrefInterPro:IPR008701
DBxrefPFAM:PF05630
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2541264..2542496 +
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