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KJC3_001001-T1, KJC3_001001-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001001-T1
Unique NameKJC3_001001-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2542745..2543980-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001001-T1 ID=KJC3_001001-T1|Name=KJC3_001001-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1236bp|location=Sequence derived from alignment at ch1:2542745..2543980- (Aspergillus niger KJC3)
ATGCGTCAAGCTCAGTCTGCTTCTCTCCTCGCGGCCCTTCTGTCGGCCAC
CCAGGTCGCTGCCCACGGTCACGTCACTAACCTCGTCGTCGACGGTGTCT
ACTACGAGGGCTTCGACATCAGCGTCTTCCCTTACGAGTCCGACCCCCCG
AAGGTCGCCGCCTGGACGACCCCCAACACCGGTAACGGCTTCATCTCGCC
CGACGAGTACCGCAACCCCAACATCATCTGTCACGAGAACGCCACCAACG
CCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACATCCAGTGG
ACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACCTGGCTCG
TTGTGACGGCAGCTGCGAGACCGTCGACAAAACCGACCTGGAGTTCTTCA
AGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGGTACCTGG
GGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCGAGATCCC
TCCCTCCATTGCCGCTGGTAACTACGTCCTCCGTCACGAGCTCATCGCTC
TCCACGGCGCTGAGGAGCAGGACGGCGCCCAGAACTACCCCCAGTGCTTC
AACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTGTCAAGGG
TACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAACATCTACT
CCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAGCGGCGAT
GTCTCCATCACTCAGACTACTTCCGCTGTCACTTCCACCGGCACCGCCGT
GGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTCGACCGCTGCCGCCG
CTACCAGCGCTGCTGCCGTGACCAGCGTTGACACCAACACCCAGATCGCT
CAGTCCAGCAGTGCCCCTGCCCCTGCTGCCCCTAGCTCCAGCTCCTCCGC
CTACACTCAGATCCCCGTGCAGGTCCCCTCTTCTTGGACTACCCTGTTGA
CCTTCACCAACACTCCCCAGGCTGTGCAGCCTACTACCTCGGTCCAGCCC
GAGCCTGCTCAGTCGACTATCACCCCTGCTCCGGCTGTTAGCTCTGCTGC
CTCCGGTAGCTCCGGTAGCCAGTCTCTGTACGGCCAGTGCGGTGGTATCA
ACTGGACTGGTGCTACTCAGTGCGCGAGCGGATCTAGCTGCCACTCGTAC
AACCCTTACTACTACCAGTGCATTGCTAGTGCTTAA
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Coding sequence (CDS) from alignment at ch1:2542745..2543980-

>KJC3_001001-T1 ID=KJC3_001001-T1|Name=KJC3_001001-T1|organism=Aspergillus niger KJC3|type=CDS|length=1236bp|location=Sequence derived from alignment at ch1:2542745..2543980- (Aspergillus niger KJC3)
ATGCGTCAAGCTCAGTCTGCTTCTCTCCTCGCGGCCCTTCTGTCGGCCAC
CCAGGTCGCTGCCCACGGTCACGTCACTAACCTCGTCGTCGACGGTGTCT
ACTACGAGGGCTTCGACATCAGCGTCTTCCCTTACGAGTCCGACCCCCCG
AAGGTCGCCGCCTGGACGACCCCCAACACCGGTAACGGCTTCATCTCGCC
CGACGAGTACCGCAACCCCAACATCATCTGTCACGAGAACGCCACCAACG
CCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACATCCAGTGG
ACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACCTGGCTCG
TTGTGACGGCAGCTGCGAGACCGTCGACAAAACCGACCTGGAGTTCTTCA
AGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGGTACCTGG
GGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCGAGATCCC
TCCCTCCATTGCCGCTGGTAACTACGTCCTCCGTCACGAGCTCATCGCTC
TCCACGGCGCTGAGGAGCAGGACGGCGCCCAGAACTACCCCCAGTGCTTC
AACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTGTCAAGGG
TACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAACATCTACT
CCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAGCGGCGAT
GTCTCCATCACTCAGACTACTTCCGCTGTCACTTCCACCGGCACCGCCGT
GGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTCGACCGCTGCCGCCG
CTACCAGCGCTGCTGCCGTGACCAGCGTTGACACCAACACCCAGATCGCT
CAGTCCAGCAGTGCCCCTGCCCCTGCTGCCCCTAGCTCCAGCTCCTCCGC
CTACACTCAGATCCCCGTGCAGGTCCCCTCTTCTTGGACTACCCTGTTGA
CCTTCACCAACACTCCCCAGGCTGTGCAGCCTACTACCTCGGTCCAGCCC
GAGCCTGCTCAGTCGACTATCACCCCTGCTCCGGCTGTTAGCTCTGCTGC
CTCCGGTAGCTCCGGTAGCCAGTCTCTGTACGGCCAGTGCGGTGGTATCA
ACTGGACTGGTGCTACTCAGTGCGCGAGCGGATCTAGCTGCCACTCGTAC
AACCCTTACTACTACCAGTGCATTGCTAGTGCTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005576extracellular region
Vocabulary: Molecular Function
TermDefinition
GO:0030248cellulose binding
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001001KJC3_001001Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001001-T1.cdsKJC3_001001-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001001-T1.exon1KJC3_001001-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001001-T1KJC3_001001-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-21)
NoteCAZy:AA9
DBxrefInterPro:IPR035971
DBxrefInterPro:IPR005103
DBxrefInterPro:IPR000254
DBxrefPFAM:PF03443
DBxrefPFAM:PF00734
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2542745..2543980 -
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