|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2556785..2559943+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001006-T1 ID=KJC3_001006-T1|Name=KJC3_001006-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3159bp|location=Sequence derived from alignment at ch1:2556785..2559943+ (Aspergillus niger KJC3)
CTGACAGACTCCTCGTCATGTCTTCGGCAGTCCTTCCTGTTCGTAAAAAT
GCATCCCATCCTGGCTGGAACCAAGATCTCGGCATTCATCTGCCCAGCCC
TTGGCCGGGAGCCAAGGAGGGAGCGCGGCCCTGAACCTTCCTCGATGGCT
TCATTTCTCCCCGTTCATTCGTCTCCTCTGCCCTTGCCGAGATGAGCTGA
TTGGTGTGACCGAAAAGCTCTTCTTCCGAATATCCTGGTCGTTGAAGCAA
GCAATGCAGCCCGACCTCCACCCCGCAGAACTCACGGTTTTTCCGGGGTG
CAGCCCTTAGCTATAAAGAGGTCCCGTCGCTTCCCACTCAATCTCACCGT
TGCTTGCGACCTGCATCAGTCCTGATTCAGCCAAAAAAAGACATCTCACC
ATGTCTTCGGTGCCCACTTTCGCCGGCTTGTCCGGTCGGAAGCTGATCTG
GTCTGTGACTTCCTGTGCGACCTTGGGTTTCTTGCTCTTTGGTTACGATC
GTAAGGTTTTCTCCTTGCTGGGCGCTATAAGCCTTGAGCTAACCCTGACT
TAGAGGGTGTGATGAGCAGTATTATTGACGCCGATCCCTTCAATGACATC
TTCACGGCTACGAGAGATAACTCCACCATTCAGGGTGTGGTCACTGCTAT
CTATGAGCTGGGTAGGTACAGACCTCGTCTTTGGCTTACAACTGTACGCT
AACCCTGCTAGGATGTCTCGGCGGTGCGCTCTTCATCCTCGCCTGTGGTG
ACTGGCTCGGCCGCAGATACTCCATCATGCTGGGTGCCACCATCATGATC
ATCGGTGTTATCATCCAGGTTACGTCTATCTCGGGACACGTTCCCCTGGC
CCAATTCTGTGTTGGACGTGTTATTACCGGTGTCGGAAACGGCATGAACA
CGTCTACCATCCCCACATACCAGGCTGAATGTTCGAGGACCTCCAATCGT
GGTCTGCTCATCTGTATCGAGGGTAGTACCATTGCTATTGGAACCCTGAT
CTCCTACTGGGTGGATTTCGGCGCCTCCTACGGTCCCCCCGACCTCACTT
GGCGATTCCCCATCGCTTTCCAGATCTTCTTCGGTCTTCTTATCATCCTC
GGTCTCTTGGTGCTGCCCGAGTCTCCCAGATGGTTGTTCACCCAGGAGCG
CTACGAAGAGGGTGAGCGGGTCATTGCCGCCTTGCAGGGCAAGGAGATCA
GTCACCACGAAGTCCAGCTGCAGAAGACCATCATTCTGGACTCCCTCAGA
GCGTATGACCCCTAGCCCCTAGATCTACGATAAGCTTAAGCTAACCTCCC
CCAGTTCCGGCATGGCCACCAAGTCCACCCCCCTCTCCGCCGTCTTCACC
GGCGGCAAGACCCAGCACTGCCGTCGCATGCTTTTGGGCTGCTCGTCTCA
ATTCTTCCAGCAAATCGGTGGCTGTAACGCTGTCATCTACTACCTGCCCG
TTCTGATGCAGCAATCCCTCCACCAAACCGAATTCATGGCCATGATTCTC
GGTGGTGTCAACATGATCGTCTACTCGATCTTCGCCTGCTCGTCCTGGTT
CCTGATCCAAAAGGTCGGCCGTCGCAACCTCTTCCTTGTCGGCTCCTTCG
GCCAAAGTGCGTCCATGGTGATCACCTTCGCCTGCTTGATCCCCGGCGGT
CCCGAAGCCGCTAAGGGTGCCGCTGTAGGCCTGTTCACCTTCATTGCCAC
CTTCGGCGCAACCTGGCTCCCGCTTCCCTGGCTCTACCCGGCTGAGATTT
CCCCGATCAAGACCCGTACCAAGGCGAACGCCATCTCCACTTGCACCAAC
TGGCTCTTCAACTTCCTCATTGTCATGGTCACCCCCATTATGATTCGCAA
CATCGGATGGGGCACGTACCTCTTTTTCGCAGTCATTAATGCCCTCTTCA
TTCCCGTCATTTACTTTTTCTACCCCGAGACGAAAGACAGATCGCTCGAG
GAGATTGATTTGATTTTCGCCAAGGGTTACGTGGAGAAGATGACCTACGT
GCGTGCGGCCAAGGAGCTGCCGCACTTGACGGACGAAGAGGTCGAGCAGG
TTGCTATTCAGTATGGATTTGGTCCTGCTGATCAGCCGGCTAGTGGCGAT
AGTGAGAGTACGGAGACTGGTGCGGGTAGGACGGAGGTTGAGGTGGAGAA
GCGCAGTGAGTAAGAGGGAATTAATTGGTTAGATTAGATGGTGTGTCCGA
TAGATGGGCAGTTGTTGTTTGAGGCAGTGATATCCAGATTGACATTGTTT
TACTCGTTGGACAAGATACCATATACCAGATGGAGTTTGGCTCTGTCATT
ATATTATGGAACATTTTTATAGGACTGCAATATACCTACCACAATCCTTA
CACTTTGATATTGAAGATTCCTCCACCAAACATAATCTCATATGCGCAAA
ACGACTCCCAATAACAGCCAGGCCTAAAGCCCAAAACACCCTCATACTAG
ACGCAACATCCCTCCCAAGCACCTCGAGCCGGCTCTTCCCCTCCACCCCC
CTAGACGTCTTATCCAAGCTCTCGACCCTATTTTTTCCATCCTCACCCCA
AACCAACACCTCCACATCGCTGAACTTTTGCACTGCACTTTCAGCAACAA
ACTCAAATCAATGATCCTGAACCGTTCTCACCAGCTCCATATGCTTCACA
ACATCCTGTCCAGTAAACGACACCCCTCACCCCCCCATGTCTGGTGGTTC
GTGCATGATGCTGTTGCAGTGGTTTGGAGGATGGATGGGATATTTTACGG
TACTTTGTATAAGACTTTTCAGAAGTGGTAACTGTGAACGAAATATCTGC
TAGCTGATAATAGCAATCCATCTATGTTTGTATCCAAATAGAGGGGAAAG
GAAAAGTAAGTATAAAAGGTCAAAAGATTATGACGCCTACTATTAGGTCG
AATACTGCACTGGACTCGCACAGCCCTATTCTGCAAGATATCTTAGCTCG
AAATATCATCTAACCAGCAACTGAAGGTGGAAAATGGTGAAGGTTGATGT
CTCTTAGGTTATGGTAAGCCCCCCGCTTTTTCTGGATTCAATTTCCGCTT
GTTGGAGTCATGATCCGGAGATATTTTTCATTGGTGAAGTTGGCTTGCCA
TGCACAGGCGTAACTGATGAGTCAAATATGTATGACTACTGACAACTAAT
CTAAACCAG back to topCoding sequence (CDS) from alignment at ch1:2556785..2559943+ >KJC3_001006-T1 ID=KJC3_001006-T1|Name=KJC3_001006-T1|organism=Aspergillus niger KJC3|type=CDS|length=6432bp|location=Sequence derived from alignment at ch1:2556785..2559943+ (Aspergillus niger KJC3)
ATGTCTTCGGTGCCCACTTTCGCCGGCTTGTCCGGTCGGAAGCTGATCTG
GTCTGTGACTTCCTGTGCGACCTTGGGTTTCTTGCTCTTTGGTTACGATC
AGGGTGTGATGAGCAGTATTATTGACGCCGATCCCTTCAATGACATCTTC
ACGGCTACGAGAGATAACTCCACCATTCAGGGTGTGGTCACTGCTATCTA
TGAGCTGGGATGTCTCGGCGGTGCGCTCTTCATCCTCGCCTGTGGTGACT
GGCTCGGCCGCAGATACTCCATCATGCTGGGTGCCACCATCATGATCATC
GGTGTTATCATCCAGGTTACGTCTATCTCGGGACACGTTCCCCTGGCCCA
ATTCTGTGTTGGACGTGTTATTACCGGTGTCGGAAACGGCATGAACACGT
CTACCATCCCCACATACCAGGCTGAATGTTCGAGGACCTCCAATCGTGGT
CTGCTCATCTGTATCGAGGGTAGTACCATTGCTATTGGAACCCTGATCTC
CTACTGGGTGGATTTCGGCGCCTCCTACGGTCCCCCCGACCTCACTTGGC
GATTCCCCATCGCTTTCCAGATCTTCTTCGGTCTTCTTATCATCCTCGGT
CTCTTGGTGCTGCCCGAGTCTCCCAGATGGTTGTTCACCCAGGAGCGCTA
CGAAGAGGGTGAGCGGGTCATTGCCGCCTTGCAGGGCAAGGAGATCAGTC
ACCACGAAGTCCAGCTGCAGAAGACCATCATTCTGGACTCCCTCAGAGCT
TCCGGCATGGCCACCAAGTCCACCCCCCTCTCCGCCGTCTTCACCGGCGG
CAAGACCCAGCACTGCCGTCGCATGCTTTTGGGCTGCTCGTCTCAATTCT
TCCAGCAAATCGGTGGCTGTAACGCTGTCATCTACTACCTGCCCGTTCTG
ATGCAGCAATCCCTCCACCAAACCGAATTCATGGCCATGATTCTCGGTGG
TGTCAACATGATCGTCTACTCGATCTTCGCCTGCTCGTCCTGGTTCCTGA
TCCAAAAGGTCGGCCGTCGCAACCTCTTCCTTGTCGGCTCCTTCGGCCAA
AGTGCGTCCATGGTGATCACCTTCGCCTGCTTGATCCCCGGCGGTCCCGA
AGCCGCTAAGGGTGCCGCTGTAGGCCTGTTCACCTTCATTGCCACCTTCG
GCGCAACCTGGCTCCCGCTTCCCTGGCTCTACCCGGCTGAGATTTCCCCG
ATCAAGACCCGTACCAAGGCGAACGCCATCTCCACTTGCACCAACTGGCT
CTTCAACTTCCTCATTGTCATGGTCACCCCCATTATGATTCGCAACATCG
GATGGGGCACGTACCTCTTTTTCGCAGTCATTAATGCCCTCTTCATTCCC
GTCATTTACTTTTTCTACCCCGAGACGAAAGACAGATCGCTCGAGGAGAT
TGATTTGATTTTCGCCAAGGGTTACGTGGAGAAGATGACCTACGTGCGTG
CGGCCAAGGAGCTGCCGCACTTGACGGACGAAGAGGTCGAGCAGGTTGCT
ATTCAGTATGGATTTGGTCCTGCTGATCAGCCGGCTAGTGGCGATAGTGA
GAGTACGGAGACTGGTGCGGGTAGGACGGAGGTTGAGGTGGAGAAGCGCA
GTGAGTAAATGTCTTCGGTGCCCACTTTCGCCGGCTTGTCCGGTCGGAAG
CTGATCTGGTCTGTGACTTCCTGTGCGACCTTGGGTTTCTTGCTCTTTGG
TTACGATCAGGGTGTGATGAGCAGTATTATTGACGCCGATCCCTTCAATG
ACATCTTCACGGCTACGAGAGATAACTCCACCATTCAGGGTGTGGTCACT
GCTATCTATGAGCTGGGATGTCTCGGCGGTGCGCTCTTCATCCTCGCCTG
TGGTGACTGGCTCGGCCGCAGATACTCCATCATGCTGGGTGCCACCATCA
TGATCATCGGTGTTATCATCCAGGTTACGTCTATCTCGGGACACGTTCCC
CTGGCCCAATTCTGTGTTGGACGTGTTATTACCGGTGTCGGAAACGGCAT
GAACACGTCTACCATCCCCACATACCAGGCTGAATGTTCGAGGACCTCCA
ATCGTGGTCTGCTCATCTGTATCGAGGGTAGTACCATTGCTATTGGAACC
CTGATCTCCTACTGGGTGGATTTCGGCGCCTCCTACGGTCCCCCCGACCT
CACTTGGCGATTCCCCATCGCTTTCCAGATCTTCTTCGGTCTTCTTATCA
TCCTCGGTCTCTTGGTGCTGCCCGAGTCTCCCAGATGGTTGTTCACCCAG
GAGCGCTACGAAGAGGGTGAGCGGGTCATTGCCGCCTTGCAGGGCAAGGA
GATCAGTCACCACGAAGTCCAGCTGCAGAAGACCATCATTCTGGACTCCC
TCAGAGCTTCCGGCATGGCCACCAAGTCCACCCCCCTCTCCGCCGTCTTC
ACCGGCGGCAAGACCCAGCACTGCCGTCGCATGCTTTTGGGCTGCTCGTC
TCAATTCTTCCAGCAAATCGGTGGCTGTAACGCTGTCATCTACTACCTGC
CCGTTCTGATGCAGCAATCCCTCCACCAAACCGAATTCATGGCCATGATT
CTCGGTGGTGTCAACATGATCGTCTACTCGATCTTCGCCTGCTCGTCCTG
GTTCCTGATCCAAAAGGTCGGCCGTCGCAACCTCTTCCTTGTCGGCTCCT
TCGGCCAAAGTGCGTCCATGGTGATCACCTTCGCCTGCTTGATCCCCGGC
GGTCCCGAAGCCGCTAAGGGTGCCGCTGTAGGCCTGTTCACCTTCATTGC
CACCTTCGGCGCAACCTGGCTCCCGCTTCCCTGGCTCTACCCGGCTGAGA
TTTCCCCGATCAAGACCCGTACCAAGGCGAACGCCATCTCCACTTGCACC
AACTGGCTCTTCAACTTCCTCATTGTCATGGTCACCCCCATTATGATTCG
CAACATCGGATGGGGCACGTACCTCTTTTTCGCAGTCATTAATGCCCTCT
TCATTCCCGTCATTTACTTTTTCTACCCCGAGACGAAAGACAGATCGCTC
GAGGAGATTGATTTGATTTTCGCCAAGGGTTACGTGGAGAAGATGACCTA
CGTGCGTGCGGCCAAGGAGCTGCCGCACTTGACGGACGAAGAGGTCGAGC
AGGTTGCTATTCAGTATGGATTTGGTCCTGCTGATCAGCCGGCTAGTGGC
GATAGTGAGAGTACGGAGACTGGTGCGGGTAGGACGGAGGTTGAGGTGGA
GAAGCGCAGTGAGTAAATGTCTTCGGTGCCCACTTTCGCCGGCTTGTCCG
GTCGGAAGCTGATCTGGTCTGTGACTTCCTGTGCGACCTTGGGTTTCTTG
CTCTTTGGTTACGATCAGGGTGTGATGAGCAGTATTATTGACGCCGATCC
CTTCAATGACATCTTCACGGCTACGAGAGATAACTCCACCATTCAGGGTG
TGGTCACTGCTATCTATGAGCTGGGATGTCTCGGCGGTGCGCTCTTCATC
CTCGCCTGTGGTGACTGGCTCGGCCGCAGATACTCCATCATGCTGGGTGC
CACCATCATGATCATCGGTGTTATCATCCAGGTTACGTCTATCTCGGGAC
ACGTTCCCCTGGCCCAATTCTGTGTTGGACGTGTTATTACCGGTGTCGGA
AACGGCATGAACACGTCTACCATCCCCACATACCAGGCTGAATGTTCGAG
GACCTCCAATCGTGGTCTGCTCATCTGTATCGAGGGTAGTACCATTGCTA
TTGGAACCCTGATCTCCTACTGGGTGGATTTCGGCGCCTCCTACGGTCCC
CCCGACCTCACTTGGCGATTCCCCATCGCTTTCCAGATCTTCTTCGGTCT
TCTTATCATCCTCGGTCTCTTGGTGCTGCCCGAGTCTCCCAGATGGTTGT
TCACCCAGGAGCGCTACGAAGAGGGTGAGCGGGTCATTGCCGCCTTGCAG
GGCAAGGAGATCAGTCACCACGAAGTCCAGCTGCAGAAGACCATCATTCT
GGACTCCCTCAGAGCTTCCGGCATGGCCACCAAGTCCACCCCCCTCTCCG
CCGTCTTCACCGGCGGCAAGACCCAGCACTGCCGTCGCATGCTTTTGGGC
TGCTCGTCTCAATTCTTCCAGCAAATCGGTGGCTGTAACGCTGTCATCTA
CTACCTGCCCGTTCTGATGCAGCAATCCCTCCACCAAACCGAATTCATGG
CCATGATTCTCGGTGGTGTCAACATGATCGTCTACTCGATCTTCGCCTGC
TCGTCCTGGTTCCTGATCCAAAAGGTCGGCCGTCGCAACCTCTTCCTTGT
CGGCTCCTTCGGCCAAAGTGCGTCCATGGTGATCACCTTCGCCTGCTTGA
TCCCCGGCGGTCCCGAAGCCGCTAAGGGTGCCGCTGTAGGCCTGTTCACC
TTCATTGCCACCTTCGGCGCAACCTGGCTCCCGCTTCCCTGGCTCTACCC
GGCTGAGATTTCCCCGATCAAGACCCGTACCAAGGCGAACGCCATCTCCA
CTTGCACCAACTGGCTCTTCAACTTCCTCATTGTCATGGTCACCCCCATT
ATGATTCGCAACATCGGATGGGGCACGTACCTCTTTTTCGCAGTCATTAA
TGCCCTCTTCATTCCCGTCATTTACTTTTTCTACCCCGAGACGAAAGACA
GATCGCTCGAGGAGATTGATTTGATTTTCGCCAAGGGTTACGTGGAGAAG
ATGACCTACGTGCGTGCGGCCAAGGAGCTGCCGCACTTGACGGACGAAGA
GGTCGAGCAGGTTGCTATTCAGTATGGATTTGGTCCTGCTGATCAGCCGG
CTAGTGGCGATAGTGAGAGTACGGAGACTGGTGCGGGTAGGACGGAGGTT
GAGGTGGAGAAGCGCAGTGAGTAAATGTCTTCGGTGCCCACTTTCGCCGG
CTTGTCCGGTCGGAAGCTGATCTGGTCTGTGACTTCCTGTGCGACCTTGG
GTTTCTTGCTCTTTGGTTACGATCAGGGTGTGATGAGCAGTATTATTGAC
GCCGATCCCTTCAATGACATCTTCACGGCTACGAGAGATAACTCCACCAT
TCAGGGTGTGGTCACTGCTATCTATGAGCTGGGATGTCTCGGCGGTGCGC
TCTTCATCCTCGCCTGTGGTGACTGGCTCGGCCGCAGATACTCCATCATG
CTGGGTGCCACCATCATGATCATCGGTGTTATCATCCAGGTTACGTCTAT
CTCGGGACACGTTCCCCTGGCCCAATTCTGTGTTGGACGTGTTATTACCG
GTGTCGGAAACGGCATGAACACGTCTACCATCCCCACATACCAGGCTGAA
TGTTCGAGGACCTCCAATCGTGGTCTGCTCATCTGTATCGAGGGTAGTAC
CATTGCTATTGGAACCCTGATCTCCTACTGGGTGGATTTCGGCGCCTCCT
ACGGTCCCCCCGACCTCACTTGGCGATTCCCCATCGCTTTCCAGATCTTC
TTCGGTCTTCTTATCATCCTCGGTCTCTTGGTGCTGCCCGAGTCTCCCAG
ATGGTTGTTCACCCAGGAGCGCTACGAAGAGGGTGAGCGGGTCATTGCCG
CCTTGCAGGGCAAGGAGATCAGTCACCACGAAGTCCAGCTGCAGAAGACC
ATCATTCTGGACTCCCTCAGAGCTTCCGGCATGGCCACCAAGTCCACCCC
CCTCTCCGCCGTCTTCACCGGCGGCAAGACCCAGCACTGCCGTCGCATGC
TTTTGGGCTGCTCGTCTCAATTCTTCCAGCAAATCGGTGGCTGTAACGCT
GTCATCTACTACCTGCCCGTTCTGATGCAGCAATCCCTCCACCAAACCGA
ATTCATGGCCATGATTCTCGGTGGTGTCAACATGATCGTCTACTCGATCT
TCGCCTGCTCGTCCTGGTTCCTGATCCAAAAGGTCGGCCGTCGCAACCTC
TTCCTTGTCGGCTCCTTCGGCCAAAGTGCGTCCATGGTGATCACCTTCGC
CTGCTTGATCCCCGGCGGTCCCGAAGCCGCTAAGGGTGCCGCTGTAGGCC
TGTTCACCTTCATTGCCACCTTCGGCGCAACCTGGCTCCCGCTTCCCTGG
CTCTACCCGGCTGAGATTTCCCCGATCAAGACCCGTACCAAGGCGAACGC
CATCTCCACTTGCACCAACTGGCTCTTCAACTTCCTCATTGTCATGGTCA
CCCCCATTATGATTCGCAACATCGGATGGGGCACGTACCTCTTTTTCGCA
GTCATTAATGCCCTCTTCATTCCCGTCATTTACTTTTTCTACCCCGAGAC
GAAAGACAGATCGCTCGAGGAGATTGATTTGATTTTCGCCAAGGGTTACG
TGGAGAAGATGACCTACGTGCGTGCGGCCAAGGAGCTGCCGCACTTGACG
GACGAAGAGGTCGAGCAGGTTGCTATTCAGTATGGATTTGGTCCTGCTGA
TCAGCCGGCTAGTGGCGATAGTGAGAGTACGGAGACTGGTGCGGGTAGGA
CGGAGGTTGAGGTGGAGAAGCGCAGTGAGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001006-T1.utr5p1 | KJC3_001006-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001006-T1.utr3p1 | KJC3_001006-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2556785..2559943 + |
|
