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KJC3_001008-T1, KJC3_001008-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001008-T1
Unique NameKJC3_001008-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2563694..2565647-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001008-T1 ID=KJC3_001008-T1|Name=KJC3_001008-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1954bp|location=Sequence derived from alignment at ch1:2563694..2565647- (Aspergillus niger KJC3)
CCCAAAACTACGCGCTCTGACCAACACGTCCCTGCCTGGCCACCACCACC
ACTACCACCACCAATCTTGCCAATTGTTGTCTAAATCAGTGGTGTTTGAC
TCAATTAAATGTCTAGACTCCGGCTAAGGCCAGATATCAGATATCTAGAG
ACGTTGAAAAATGAGCAACGAAAATGACTCCTATCGTACTTCCTCGCCTG
TGCGTTGAATTACTCCGCCACACACTACGTGAATCCCGCAAGATGCAAGA
GTCTCGCGCTGTTCAACGCCAGGAGTTTAAGAAGGGCATGTTTATACGAG
CAGATAGCAAGCTTCTTACCCGTGAGCTTCGTATCAGTCAAAACACCTAA
GCCCTGTTGATATTTCACCGACAAAAGGCCGGTCCCTAAGCCATGCTCAT
CTAAATTGAGTTGGTCTATCCTTCTAAATTAATATCGTCAGCACAAGCAG
GACCCTTTTCTTGTTTCCCATCAGATCCCGTTCTCCACGTTGTTCGGTTA
CCGACTGCCACAGACCATCACTAACTTTAAACGGAAAGTGCTCCGACATA
GGGTCTCATTTTGAAACGGAGGATGTGCATGTCTGTTGCAGATTGGCGTG
AGATGGCGGCGCAACCCGCAATAGCTAGTTGGCTTACTTCTTCTTGAATG
CCATATTGGACACGGAAATTCGGACAATCATAATGGCAATAGTAAGCATT
GTTGATTAGATTCAGGTATTTAAGCTGCCTCATCTGCCGCTCCCTCCGTG
TTGGTGTCTTATCCTGAACACTTATCCTCTTATTCCTTTCGAATTTCCCT
TGATTGCCGCTCCTCCGCTCTAACGCCCAACATGAAGCTCCCCGTGTCAC
TTGCTATGCTTGCGGCCACCGCCATGGGCCAGACGATGTGCTCTCAATAT
GACAGTGCCTCGAGCCCCCCGTATTCAGTGAACCAGAACCTCTGGGGCGA
GTACCAAGGCACCGGCAGCCAGTGTGTATATGTCGACAAACTCTCCAGCA
GTGGTGCATCCTGGCACACCGAATGGACCTGGAGCGGTGGTGAGGGAACA
GTGAAAAGCTACTCTAACTCTGGCGTTACATTTAACAAGAAGCTCGTGAG
TGATGTATCAAGCATCCCCACCTCGGTGGAATGGAAGCAGGACAACACCA
ACGTCAACGCCGATGTCGCGTATGATCTTTTCACCGCGGCGAATGTGGAC
CATGCCACTTCTAGCGGCGACTATGAACTGATGATTTGGTATGTGAGCTC
TCAAAGGATCAAAGAATACAGAAATCTAACAACGCCAGGCTTGCCCGCTA
CGGCAACATCCAGCCCATTGGCAAGCAAATTGCCACGGCCACAGTGGGAG
GCAAGTCCTGGGAGGTGTGGTATGGCAGCACCACCCAGGCCGGTGCGGAG
CAGAGGACATACAGCTTCGTGTCAGAAAGCCCTATCAACTCATACAGTGG
GGACATCAATGCATTTTTCAGCTATCTCACTCAGAACCAAGGCTTTCCCG
CCAGCTCTCAGTACTTGATCAGTAAGATTCCCTGATTCTACCAGCGGACG
CCGCAGCGAAACAGTCACTAACAGAAGTGATGTGTAGATCTGCAGTTTGG
AACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACGGTTGACAACTGGA
CCGCCAGTGTCAACTAGGGTTCTAGAAGTAGCCTTTGAGGCAGAATCTGG
GTAAATTGACTCCAGCTCGGGAGAATGATAGCTTGTTTCTTCGTTCTGGA
ACGTTGGGCGTGTGAGAGCTAAAAAGTCGTACCCACTCTGATTGGAAAGA
CTTATTCAACATTGGTCCTTCCCTTCTGTTGGGCAAGGCATAGTTAGTGA
TTAGACAAGTCAAGGTCATGGTGGATCCCTTGTAATCTTAGCCAGCCTTT
TCCTATAATGGTAACCCACCCGTAGGGGGATGATCATTAACAAATCCCAG
CCGT
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Coding sequence (CDS) from alignment at ch1:2563694..2565647-

>KJC3_001008-T1 ID=KJC3_001008-T1|Name=KJC3_001008-T1|organism=Aspergillus niger KJC3|type=CDS|length=2088bp|location=Sequence derived from alignment at ch1:2563694..2565647- (Aspergillus niger KJC3)
ATCTGCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACG
GTTGACAACTGGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACA
TCCAGCCCATTGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCC
TGGGAGGTGTGGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGAC
ATACAGCTTCGTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCA
ATGCATTTTTCAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCT
CAGTACTTGATCAATGCTTGCGGCCACCGCCATGGGCCAGACGATGTGCT
CTCAATATGACAGTGCCTCGAGCCCCCCGTATTCAGTGAACCAGAACCTC
TGGGGCGAGTACCAAGGCACCGGCAGCCAGTGTGTATATGTCGACAAACT
CTCCAGCAGTGGTGCATCCTGGCACACCGAATGGACCTGGAGCGGTGGTG
AGGGAACAGTGAAAAGCTACTCTAACTCTGGCGTTACATTTAACAAGAAG
CTCGTGAGTGATGTATCAAGCATCCCCACCTCGGTGGAATGGAAGCAGGA
CAACACCAACGTCAACGCCGATGTCGCGTATGATCTTTTCACCGCGGCGA
ATGTGGACCATGCCACTTCTAGCGGCGACTATGAACTGATGATTTGATCT
GCAGTTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACGGTTG
ACAACTGGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACATCCA
GCCCATTGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCCTGGG
AGGTGTGGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGACATAC
AGCTTCGTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCAATGC
ATTTTTCAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCTCAGT
ACTTGATCAATGCTTGCGGCCACCGCCATGGGCCAGACGATGTGCTCTCA
ATATGACAGTGCCTCGAGCCCCCCGTATTCAGTGAACCAGAACCTCTGGG
GCGAGTACCAAGGCACCGGCAGCCAGTGTGTATATGTCGACAAACTCTCC
AGCAGTGGTGCATCCTGGCACACCGAATGGACCTGGAGCGGTGGTGAGGG
AACAGTGAAAAGCTACTCTAACTCTGGCGTTACATTTAACAAGAAGCTCG
TGAGTGATGTATCAAGCATCCCCACCTCGGTGGAATGGAAGCAGGACAAC
ACCAACGTCAACGCCGATGTCGCGTATGATCTTTTCACCGCGGCGAATGT
GGACCATGCCACTTCTAGCGGCGACTATGAACTGATGATTTGATCTGCAG
TTTGGAACTGAGGCGTTCACCGGGGGCCCGGCAACCTTCACGGTTGACAA
CTGGACCGCCAGTGTCAACTAGGCTTGCCCGCTACGGCAACATCCAGCCC
ATTGGCAAGCAAATTGCCACGGCCACAGTGGGAGGCAAGTCCTGGGAGGT
GTGGTATGGCAGCACCACCCAGGCCGGTGCGGAGCAGAGGACATACAGCT
TCGTGTCAGAAAGCCCTATCAACTCATACAGTGGGGACATCAATGCATTT
TTCAGCTATCTCACTCAGAACCAAGGCTTTCCCGCCAGCTCTCAGTACTT
GATCAATGCTTGCGGCCACCGCCATGGGCCAGACGATGTGCTCTCAATAT
GACAGTGCCTCGAGCCCCCCGTATTCAGTGAACCAGAACCTCTGGGGCGA
GTACCAAGGCACCGGCAGCCAGTGTGTATATGTCGACAAACTCTCCAGCA
GTGGTGCATCCTGGCACACCGAATGGACCTGGAGCGGTGGTGAGGGAACA
GTGAAAAGCTACTCTAACTCTGGCGTTACATTTAACAAGAAGCTCGTGAG
TGATGTATCAAGCATCCCCACCTCGGTGGAATGGAAGCAGGACAACACCA
ACGTCAACGCCGATGTCGCGTATGATCTTTTCACCGCGGCGAATGTGGAC
CATGCCACTTCTAGCGGCGACTATGAACTGATGATTTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008810cellulase activity
Vocabulary: Biological Process
TermDefinition
GO:0000272polysaccharide catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001008KJC3_001008Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001008-T1KJC3_001008-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001008-T1.cdsKJC3_001008-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001008-T1.utr3p1KJC3_001008-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001008-T1.exon5KJC3_001008-T1.exon5Aspergillus niger KJC3exon
KJC3_001008-T1.exon4KJC3_001008-T1.exon4Aspergillus niger KJC3exon
KJC3_001008-T1.exon3KJC3_001008-T1.exon3Aspergillus niger KJC3exon
KJC3_001008-T1.exon2KJC3_001008-T1.exon2Aspergillus niger KJC3exon
KJC3_001008-T1.exon1KJC3_001008-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001008-T1.utr5p3KJC3_001008-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_001008-T1.utr5p2KJC3_001008-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001008-T1.utr5p1KJC3_001008-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013320
DBxrefInterPro:IPR013319
DBxrefInterPro:IPR002594
DBxrefPFAM:PF01670
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2563694..2565647 -
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