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KJC3_001024-T1, KJC3_001024-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001024-T1
Unique NameKJC3_001024-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2592909..2594818+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001024-T1 ID=KJC3_001024-T1|Name=KJC3_001024-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1910bp|location=Sequence derived from alignment at ch1:2592909..2594818+ (Aspergillus niger KJC3)
GGCATCGAGCACTGTACGATAACTAAATGGTACCGACATGATGTTGTACG
AAGCGATTGGCGCAACCACCCGAGCCAAGAAGGCCAAGACAGCAGGCGCG
CCACACATAAATACAGATGGATTTCCATGATGTACGAAGAGCTGAACCAG
CATCACTGCCATGGGCAATATTCCAGATGACAAGCGACACACAGTCGTTC
AGGCTATCCCGCTCGGCGTGGGAGATGAAGCCGAGTTCGCGCAGGAGTTC
ACTCGAAAGGAACATGCGCTGGGGTTCTGGGAAGCCATGCGACTGCACTG
GCCGGCTGTGGCTTGGGCATCGTTCATGAACCTAGTAAGAGAATTTTGTT
CGTTAGAAAAGCAATTGTTGACTTCTCACAGGCGACCATTCTGAAAGGCA
TTGTAGGTCATCTCATCCTCCATGTGAGATGCAGCCCTAACTGGTATAGG
ACGGCGGCATTGTTAAAGGACTGGTTGGTCTCGACGTCTTTAAGAAGACA
TACGGCTACAACTACCATGGGGAATACGTCCTAGCGGCTCGGTGGATCTC
TGCCTTCCAATACGCCAACTTAGTAGGGGCCATCGTGGGCGCTCTCTGCT
CGGGCTTTGCCTACGATCGCTTTGGTCCGCGAGTGATGATAGCGGTGTGC
TCGTCTTTATCCATCGCCTTTATCTTCCTGCAGTTCTTCAGTCATACGCC
AGCTCAGCTCTTTGTAGGCGAGCTCATCAATGGGTGCATCATCGCATTTT
ACCCCATTTGTGCCTCCGCGTATGTGGGAGAGGTGACTCCGCTGGCACTC
CGCGGGTTCGCCGCTACTATGACCAACCTCGCCTTCTCGATCGGCTCGCT
CATCGCATCGGGCATTCTGAAAGGGACCGAATCGCTGAATACCACCATGT
CGTACAAGATTCCTATCGCGACGCAGTGGGCGCTACCATGTATCATGCTG
GCGCTGATCTTCTTCTGCCCCGATCCACCATACTGGCTATGTCGGCATGG
TCGCAACGAAGCGGCACGAGCATCGCTGCGGCGTCTGGCCACCCCAGCTG
TAGATGTGTCGCGCCAACTATCTCATATTGAAGAGACACTGCGTCTAGAG
GCCAGTTTCCAGGCCGACCGACCGACGTACCGGGAATGTCTGCGTGGGCC
AAACCTCCGTCGGCTGCTGATCTGCGTGATGGCCTACAACATGCAAGCGT
TCACCGGAAATGTCTTTTTCATCAACTATGCTGTGCACTTTATGGAGCTG
GCGGGCTTGGACTCGTCGCATGCATTCTCGATGAACATCGGACTGACGGC
GTTGGGATTAGTCGGGACATGTCTGTCGTGGCTATTACTGCCCTACGTCG
GGCGCCGAACTATGTATATATTCGGGTGCTCCGCATTGGCGGTGGTACAG
TGCCTGATCGGTGTGCTCGATGTTGTTCCGCGAGACACGGCCACGGTATG
GGGACAGTGTGGGCTCATGCTGGCCTGCACGTTCGTGTATGATCTCAGTC
TCGGCCCGTTCTGCTATGTGCTGCTGGCAGAGGTATCATCGGCGCGATTG
CGGGGACTGACCATTGCGCTGGCCACAGTCAGCTGCTTTGTGTGGTCGGT
AGTGTTTGCAGTGGTGATTCCGTATGCGATGAATGAAGACGAGGGGAATT
GGCGGGGCAAGCTGGGATTTTTGTTTGCGGGGTTGGGTGCGCTGTGCGCG
GGATATTGTTTCTGGTGTATGCCAGAGACACAAGGAAAGACCTTTGAAGA
GTTGGATGTACTGTTTGAGAAGGGCATTCCAAGTCGAAAGTTCAAGAATT
GTGTGGTTGAGATGCAGTAAATAGAAGCCAAATCTGTTGATGCCGAAGAC
CGAATCTTTTCCGAGGAAAAAATTCTCGGATTATGCTGACTAATGCCGGG
GATAATGGAG
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Coding sequence (CDS) from alignment at ch1:2592909..2594818+

>KJC3_001024-T1 ID=KJC3_001024-T1|Name=KJC3_001024-T1|organism=Aspergillus niger KJC3|type=CDS|length=1185bp|location=Sequence derived from alignment at ch1:2592909..2594818+ (Aspergillus niger KJC3)
ATGATAGCGGTGTGCTCGTCTTTATCCATCGCCTTTATCTTCCTGCAGTT
CTTCAGTCATACGCCAGCTCAGCTCTTTGTAGGCGAGCTCATCAATGGGT
GCATCATCGCATTTTACCCCATTTGTGCCTCCGCGTATGTGGGAGAGGTG
ACTCCGCTGGCACTCCGCGGGTTCGCCGCTACTATGACCAACCTCGCCTT
CTCGATCGGCTCGCTCATCGCATCGGGCATTCTGAAAGGGACCGAATCGC
TGAATACCACCATGTCGTACAAGATTCCTATCGCGACGCAGTGGGCGCTA
CCATGTATCATGCTGGCGCTGATCTTCTTCTGCCCCGATCCACCATACTG
GCTATGTCGGCATGGTCGCAACGAAGCGGCACGAGCATCGCTGCGGCGTC
TGGCCACCCCAGCTGTAGATGTGTCGCGCCAACTATCTCATATTGAAGAG
ACACTGCGTCTAGAGGCCAGTTTCCAGGCCGACCGACCGACGTACCGGGA
ATGTCTGCGTGGGCCAAACCTCCGTCGGCTGCTGATCTGCGTGATGGCCT
ACAACATGCAAGCGTTCACCGGAAATGTCTTTTTCATCAACTATGCTGTG
CACTTTATGGAGCTGGCGGGCTTGGACTCGTCGCATGCATTCTCGATGAA
CATCGGACTGACGGCGTTGGGATTAGTCGGGACATGTCTGTCGTGGCTAT
TACTGCCCTACGTCGGGCGCCGAACTATGTATATATTCGGGTGCTCCGCA
TTGGCGGTGGTACAGTGCCTGATCGGTGTGCTCGATGTTGTTCCGCGAGA
CACGGCCACGGTATGGGGACAGTGTGGGCTCATGCTGGCCTGCACGTTCG
TGTATGATCTCAGTCTCGGCCCGTTCTGCTATGTGCTGCTGGCAGAGGTA
TCATCGGCGCGATTGCGGGGACTGACCATTGCGCTGGCCACAGTCAGCTG
CTTTGTGTGGTCGGTAGTGTTTGCAGTGGTGATTCCGTATGCGATGAATG
AAGACGAGGGGAATTGGCGGGGCAAGCTGGGATTTTTGTTTGCGGGGTTG
GGTGCGCTGTGCGCGGGATATTGTTTCTGGTGTATGCCAGAGACACAAGG
AAAGACCTTTGAAGAGTTGGATGTACTGTTTGAGAAGGGCATTCCAAGTC
GAAAGTTCAAGAATTGTGTGGTTGAGATGCAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
GO:0016021integral component of membrane
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001024KJC3_001024Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001024-T1.utr5p1KJC3_001024-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001024-T1.exon1KJC3_001024-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001024-T1.cdsKJC3_001024-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001024-T1.utr3p1KJC3_001024-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001024-T1KJC3_001024-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-23)
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR003663
DBxrefInterPro:IPR005828
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2592909..2594818 +
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