You are here

Home

KJC3_001025-T1, KJC3_001025-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001025-T1
Unique NameKJC3_001025-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2594800..2596643+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001025-T1 ID=KJC3_001025-T1|Name=KJC3_001025-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1844bp|location=Sequence derived from alignment at ch1:2594800..2596643+ (Aspergillus niger KJC3)
AATGCCGGGGATAATGGAGATAACTTCAAATCAACCTCAGCATCCGCCAC
TGCCGAGGTATCTTGGGGATTTTCTTCAGTCCCAACACATTCTATTTCTG
CTTGATAAGCATCGGTCGCTGAATACTAATCAGTTTCACCGTCTGCATTG
AATCCCCCGCCTGTCCCTTTATCCCGCGGCCCAGGGCATAACTCTACACC
GTAGTCCCCGCCATGTGGGAACCCGCCGGCTTCCATTCCTGATTCTAAGA
TCCGCTCCGCCAGTATGACATAACTAATCCTTCACGGAGATGCGTTTCCG
TAGCTGGGATCCTATCAGATGGATATCTTTTACACAGTAAGACTTGTATT
CTGGAATGTCCAGAATGATCTGTTGCACACTGATGAAGAAAATCCTAACT
TTGCCGAGCAGGGAGTCGCCGCCATCATGCCGAACCGGTTGATGCCCCGA
ACAAGCATATCCCCCGATTGCCTCATCACCGGCACGGTCCACCAGAGCCG
TGGTTCAACGGAGCTTCTGCACCAATCTGTCCGTTGTCCCTGGCGAAAAC
CCACCCACACCAGCCTGTTTCGGTAAGAGCCTAGGTAACTCAAAATGCAA
TCCTCGTCTCGAGAAGCTTCTGTTTGCCTTCGGGGGCGCAATACACAAAA
GAATCATCCATGATGCTTTGTAATCGAGATTCCACCGCAGGAAATATAAA
CCTACGTCAGACCCTTTTGCCTCTACTCGAAGTACCTACTAAAAATCCAA
GCCATAATCGCAACCATGTCCAACCAAAGCCTCGTCTTCAAGCAAATCCC
CACCGGCTACTTCGTCCCCGGCCAGGACGTCGTCGTTGAGCAGGCCTCGT
ACGACGCCTCCGCCCCGGCCCCGGAGGGCGGCATCTTCGTGCAATCCCTC
TATGCCAGCTTCGACCCCTACATGCGCGGCCGCATGCGCCCCGCCCACAT
CAAGTCCTACTCTCCCGCCTTCACCCTCGACGCTCCCATCGACAGCAGCA
TCATCGCCAAGGTCCTCCGCTCCAACACCCCCGCCTACAAGGAGGGCGAC
CTGATCATCGGCTTCCTCCCTATCCAGCAGTACATCTCCGTCAGCGCTGA
GCAGCTCCCCCGCGTCCGCGCCCTCGAGAACCCCCTCGGCATCGAGGACC
TCCGCGTCTTCATCGGCGCCCTCGGCATGCCCGGTCTGACTGCCTACTCC
TCCCTCTACGAGATCGGCAAGCCCAAGAAGGGCGAGACCATCTTCGTCTC
CGCCGCTAGTGGCGCTGTCGGCCAGCTGGTCGGCCAGCTCGCTAAGCACG
AGGGTCTGAAGGTCATTGGATCCGTTGGATCGGATGAGAAGCTCGACTTC
ATCATCAAGGAGCTGGGCTTCGATGGTGGATTCAACTACAAGACGGAGAA
GCCGGCTGATGCGCTGGCGCGTCTGGCTCCCGAGGGTCTGGATATCTACT
ATGAGAACGTCGGTGGTGAGCACCTCGAGGCTGCGCTCAACGCGATGAAT
GATTTCGGTCGTGTCGTGGTCTGCGGTATGATCTCGCAGTACAACGGTGG
TGGTTATCCCATTAAGAACATTACCAATGTGTTGACCAAGCGTCTGGATA
TGCGCGGTTTCATTGTCGGTGATAAGGGTATGGGTGATAAGTATGCTAAG
GAGCACCAGGAGAATGTGCAGAAGTGGATCAAGGAGGGCACGTTTAAGAC
TTTGATCCATGAGACTCAGGGCATTGAGAATGCGCCCGAGGGCTTGTTGG
GCATTTTCCATGGAAAGAACCTGGGTAAGGCTGTTCTTAAGTTCTAAGCT
AGCTTAGAATGTTGGCTATGATATAGATTACGGTATAGATAATA
back to top

Coding sequence (CDS) from alignment at ch1:2594800..2596643+

>KJC3_001025-T1 ID=KJC3_001025-T1|Name=KJC3_001025-T1|organism=Aspergillus niger KJC3|type=CDS|length=1032bp|location=Sequence derived from alignment at ch1:2594800..2596643+ (Aspergillus niger KJC3)
ATGTCCAACCAAAGCCTCGTCTTCAAGCAAATCCCCACCGGCTACTTCGT
CCCCGGCCAGGACGTCGTCGTTGAGCAGGCCTCGTACGACGCCTCCGCCC
CGGCCCCGGAGGGCGGCATCTTCGTGCAATCCCTCTATGCCAGCTTCGAC
CCCTACATGCGCGGCCGCATGCGCCCCGCCCACATCAAGTCCTACTCTCC
CGCCTTCACCCTCGACGCTCCCATCGACAGCAGCATCATCGCCAAGGTCC
TCCGCTCCAACACCCCCGCCTACAAGGAGGGCGACCTGATCATCGGCTTC
CTCCCTATCCAGCAGTACATCTCCGTCAGCGCTGAGCAGCTCCCCCGCGT
CCGCGCCCTCGAGAACCCCCTCGGCATCGAGGACCTCCGCGTCTTCATCG
GCGCCCTCGGCATGCCCGGTCTGACTGCCTACTCCTCCCTCTACGAGATC
GGCAAGCCCAAGAAGGGCGAGACCATCTTCGTCTCCGCCGCTAGTGGCGC
TGTCGGCCAGCTGGTCGGCCAGCTCGCTAAGCACGAGGGTCTGAAGGTCA
TTGGATCCGTTGGATCGGATGAGAAGCTCGACTTCATCATCAAGGAGCTG
GGCTTCGATGGTGGATTCAACTACAAGACGGAGAAGCCGGCTGATGCGCT
GGCGCGTCTGGCTCCCGAGGGTCTGGATATCTACTATGAGAACGTCGGTG
GTGAGCACCTCGAGGCTGCGCTCAACGCGATGAATGATTTCGGTCGTGTC
GTGGTCTGCGGTATGATCTCGCAGTACAACGGTGGTGGTTATCCCATTAA
GAACATTACCAATGTGTTGACCAAGCGTCTGGATATGCGCGGTTTCATTG
TCGGTGATAAGGGTATGGGTGATAAGTATGCTAAGGAGCACCAGGAGAAT
GTGCAGAAGTGGATCAAGGAGGGCACGTTTAAGACTTTGATCCATGAGAC
TCAGGGCATTGAGAATGCGCCCGAGGGCTTGTTGGGCATTTTCCATGGAA
AGAACCTGGGTAAGGCTGTTCTTAAGTTCTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Vocabulary: Molecular Function
TermDefinition
GO:0016491oxidoreductase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001025KJC3_001025Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001025-T1KJC3_001025-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001025-T1.utr5p1KJC3_001025-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_001025-T1.utr5p2KJC3_001025-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001025-T1.exon1KJC3_001025-T1.exon1Aspergillus niger KJC3exon
KJC3_001025-T1.exon2KJC3_001025-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001025-T1.cdsKJC3_001025-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001025-T1.utr3p1KJC3_001025-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR041694
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR020843
DBxrefPFAM:PF13602
DBxrefPFAM:PF00107
DBxrefPFAM:PF16884
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2594800..2596643 +
Powered by Drupal