|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2596796..2598277- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001026-T1 ID=KJC3_001026-T1|Name=KJC3_001026-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1482bp|location=Sequence derived from alignment at ch1:2596796..2598277- (Aspergillus niger KJC3)
ATGAAGTGGCTCAACCTCCTCCCCATAGCCTTAGGGCTAGGTACCACACC
CTCCCCATTACCATCTCTACACATCCATCAAACCATACTAACCAAGCTGA
TTACCAGCCAACGCAAGCATCATCTCCTTCTCCCCCCCAACGAACCCGGA
CATCATCTACAGCCTCACCATCCCCAACACCACGACCCTCTCCACCCCAG
GCCCCATCTACATCCAAATCACCGCCCCAACCTCCATCCAATGGGTCGGC
CTCGGCCAAGGCGCCCAAATGACCGGCGCCAACATGTTCCTCCTGTACAC
CTCGTCATCCACCAAAATAACCCTCTCCCCGCGCTCCGGCCTCGGCCACT
TCGAACCCCAATACACAAGCAACACCCAAATCACCATGCTCCCGGGCACC
GGCATCTCCACCATCAACTCCACCACCGCCGCCCTCACCAACAGCTCCTC
CCCCTCCTCCGACAACACCAGAACAACCATGACGGCCAACTTCCGCTGCG
ACAACTGTCTCACCTGGCAAGACGGCACCGGCACGATGAACCCCAAGGAC
CCAAACTTCCCATTCATCTGGGCCTATCGCGAGGGCGTCCCCATCAACTC
GGCCGCCATGGACGCGGACATCTCAATCCACGACGACATGGGCGGTATCC
AAGTCGACCTCACTCGGGCAGGGATGCCCCCGCAACCCAACACCTCCACT
ACCGAGGACGACCAAATAAACCCCTTCACCAACTATAACCCAGCTACGGA
CTCCGTCTCCGTACAAGCCCCCAGCACACCGACCTCCCCGCTCCCCAACC
TTACTAAAATGACGCATATCCTCATAACCCACGCTACGCTGATGTCCCTC
TCCTTCGCGCTCTTCTACCCGCTCGCTGCTCTGCTCATGCCACTTCCCAT
ATCCCTCCCCGTCTCGAAGTTCCGGCTACATATGCCACTCCAGATCTTCA
CGATGCTCATGACGCTTGCTGGCTTCGGATGTGGAATTTACCTCGCGTAT
GAGACGGGGCAGTTGAAGACGGCGCACCCTATCCTGGGGATTATTGTGGT
CGGGGTGTTGGTGCTGTTTCAACCGGCGATGGGGTGGTTGCAGCATTGGG
GGTTCTTGAGGACGGGGGGGAGGACGGGGTGGGGTGTGTCTCATAGGTGG
CTTGGGAGGGGGGTTATTGTGGTGGGCGTGGTTAATGGGGGGATTGGGTT
GCATGCTGCTAGGGGGATGGGGATGGCGCCGTTGGGGGCGGTCATTGGGT
ATGCGGTTGTGGCGGGCGTGGTTGGGGTGGTTTATGTGGTGGGTGTGCTG
GTGGGGTGGGTGGTGGAGAGGAGGAGGAAGAGGGTGGAGGGGGAGAGGGT
AGATGGGGAGGGAGTTGGGGAGGTGCAGAGGGGGGCAAGTGTGGAGGGGA
GGGATGTGCGGGAGAATGATGGGGAGAAGGGAGGGAGTGTGGAGGAGAGG
GATGGTTAGGATGGTGGTGGTGGTGGAATGGG back to topCoding sequence (CDS) from alignment at ch1:2596796..2598277- >KJC3_001026-T1 ID=KJC3_001026-T1|Name=KJC3_001026-T1|organism=Aspergillus niger KJC3|type=CDS|length=2784bp|location=Sequence derived from alignment at ch1:2596796..2598277- (Aspergillus niger KJC3)
CCAACGCAAGCATCATCTCCTTCTCCCCCCCAACGAACCCGGACATCATC
TACAGCCTCACCATCCCCAACACCACGACCCTCTCCACCCCAGGCCCCAT
CTACATCCAAATCACCGCCCCAACCTCCATCCAATGGGTCGGCCTCGGCC
AAGGCGCCCAAATGACCGGCGCCAACATGTTCCTCCTGTACACCTCGTCA
TCCACCAAAATAACCCTCTCCCCGCGCTCCGGCCTCGGCCACTTCGAACC
CCAATACACAAGCAACACCCAAATCACCATGCTCCCGGGCACCGGCATCT
CCACCATCAACTCCACCACCGCCGCCCTCACCAACAGCTCCTCCCCCTCC
TCCGACAACACCAGAACAACCATGACGGCCAACTTCCGCTGCGACAACTG
TCTCACCTGGCAAGACGGCACCGGCACGATGAACCCCAAGGACCCAAACT
TCCCATTCATCTGGGCCTATCGCGAGGGCGTCCCCATCAACTCGGCCGCC
ATGGACGCGGACATCTCAATCCACGACGACATGGGCGGTATCCAAGTCGA
CCTCACTCGGGCAGGGATGCCCCCGCAACCCAACACCTCCACTACCGAGG
ACGACCAAATAAACCCCTTCACCAACTATAACCCAGCTACGGACTCCGTC
TCCGTACAAGCCCCCAGCACACCGACCTCCCCGCTCCCCAACCTTACTAA
AATGACGCATATCCTCATAACCCACGCTACGCTGATGTCCCTCTCCTTCG
CGCTCTTCTACCCGCTCGCTGCTCTGCTCATGCCACTTCCCATATCCCTC
CCCGTCTCGAAGTTCCGGCTACATATGCCACTCCAGATCTTCACGATGCT
CATGACGCTTGCTGGCTTCGGATGTGGAATTTACCTCGCGTATGAGACGG
GGCAGTTGAAGACGGCGCACCCTATCCTGGGGATTATTGTGGTCGGGGTG
TTGGTGCTGTTTCAACCGGCGATGGGGTGGTTGCAGCATTGGGGGTTCTT
GAGGACGGGGGGGAGGACGGGGTGGGGTGTGTCTCATAGGTGGCTTGGGA
GGGGGGTTATTGTGGTGGGCGTGGTTAATGGGGGGATTGGGTTGCATGCT
GCTAGGGGGATGGGGATGGCGCCGTTGGGGGCGGTCATTGGGTATGCGGT
TGTGGCGGGCGTGGTTGGGGTGGTTTATGTGGTGGGTGTGCTGGTGGGGT
GGGTGGTGGAGAGGAGGAGGAAGAGGGTGGAGGGGGAGAGGGTAGATGGG
GAGGGAGTTGGGGAGGTGCAGAGGGGGGCAAGTGTGGAGGGGAGGGATGT
GCGGGAGAATGATGGGGAGAAGGGAGGGAGTGTGGAGGAGAGGGATGGTT
AGATGAAGTGGCTCAACCTCCTCCCCATAGCCTTAGGGCTAGCCAACGCA
AGCATCATCTCCTTCTCCCCCCCAACGAACCCGGACATCATCTACAGCCT
CACCATCCCCAACACCACGACCCTCTCCACCCCAGGCCCCATCTACATCC
AAATCACCGCCCCAACCTCCATCCAATGGGTCGGCCTCGGCCAAGGCGCC
CAAATGACCGGCGCCAACATGTTCCTCCTGTACACCTCGTCATCCACCAA
AATAACCCTCTCCCCGCGCTCCGGCCTCGGCCACTTCGAACCCCAATACA
CAAGCAACACCCAAATCACCATGCTCCCGGGCACCGGCATCTCCACCATC
AACTCCACCACCGCCGCCCTCACCAACAGCTCCTCCCCCTCCTCCGACAA
CACCAGAACAACCATGACGGCCAACTTCCGCTGCGACAACTGTCTCACCT
GGCAAGACGGCACCGGCACGATGAACCCCAAGGACCCAAACTTCCCATTC
ATCTGGGCCTATCGCGAGGGCGTCCCCATCAACTCGGCCGCCATGGACGC
GGACATCTCAATCCACGACGACATGGGCGGTATCCAAGTCGACCTCACTC
GGGCAGGGATGCCCCCGCAACCCAACACCTCCACTACCGAGGACGACCAA
ATAAACCCCTTCACCAACTATAACCCAGCTACGGACTCCGTCTCCGTACA
AGCCCCCAGCACACCGACCTCCCCGCTCCCCAACCTTACTAAAATGACGC
ATATCCTCATAACCCACGCTACGCTGATGTCCCTCTCCTTCGCGCTCTTC
TACCCGCTCGCTGCTCTGCTCATGCCACTTCCCATATCCCTCCCCGTCTC
GAAGTTCCGGCTACATATGCCACTCCAGATCTTCACGATGCTCATGACGC
TTGCTGGCTTCGGATGTGGAATTTACCTCGCGTATGAGACGGGGCAGTTG
AAGACGGCGCACCCTATCCTGGGGATTATTGTGGTCGGGGTGTTGGTGCT
GTTTCAACCGGCGATGGGGTGGTTGCAGCATTGGGGGTTCTTGAGGACGG
GGGGGAGGACGGGGTGGGGTGTGTCTCATAGGTGGCTTGGGAGGGGGGTT
ATTGTGGTGGGCGTGGTTAATGGGGGGATTGGGTTGCATGCTGCTAGGGG
GATGGGGATGGCGCCGTTGGGGGCGGTCATTGGGTATGCGGTTGTGGCGG
GCGTGGTTGGGGTGGTTTATGTGGTGGGTGTGCTGGTGGGGTGGGTGGTG
GAGAGGAGGAGGAAGAGGGTGGAGGGGGAGAGGGTAGATGGGGAGGGAGT
TGGGGAGGTGCAGAGGGGGGCAAGTGTGGAGGGGAGGGATGTGCGGGAGA
ATGATGGGGAGAAGGGAGGGAGTGTGGAGGAGAGGGATGGTTAGATGAAG
TGGCTCAACCTCCTCCCCATAGCCTTAGGGCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001026-T1.utr3p1 | KJC3_001026-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-16) |
| DBxref | InterPro:IPR038697 |
| DBxref | InterPro:IPR015920 |
| DBxref | InterPro:IPR006593 |
| DBxref | InterPro:IPR005018 |
| DBxref | PFAM:PF16010 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2596796..2598277 - |
|
