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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2606638..2610461- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001031-T1 ID=KJC3_001031-T1|Name=KJC3_001031-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3824bp|location=Sequence derived from alignment at ch1:2606638..2610461- (Aspergillus niger KJC3) CCACTAGTAACATTAGGAAGGGGAAGTAGTACAAATGTTCCATCAATCAG
GTAAGCGGCAGTACGGCGGATAAGCTATAATTGACGCCTGATAGAAGGTG
CCCCTTATGACGCTTGCCTTGCAGTTGCTGGTCTATATATAGATTTCAGG
AGAAACTTATACACTATACACAAGCGCATAACGGGACTATTAACCTTACT
TTCAAGAATACTAAACCTCAAGGTATTTGTAAATTGTCATTGGCGAATGT
GAAGTAAAGCAGCATAGATTAAACCATCCAGCTCTGCTTAACGTAGTGTG
GCCTCAGGCAAATTGGAGCCTGATCATTTTCATCTTCGCGACACTTCAAT
TTGCAACTCCACTCGTCCCCATTCCAGCTCTGCAACGACCCGCCATCACT
GATTTTCTCCGGACTCCGAGGTACTACCGCTAGAGAGACTGTGCTTGAAC
CACTGTACGCCTGTTGTGATCACCGACAAATGCTCTCCACTTCGGTCGCG
TCCCGATCGGCGCTGTCGCGCAACCTTCGGGGACTTGTGAAGTGGTCGCG
CCAGTCTTGCTGGACGAGCTCTTCGCTGTCCTGTCTTCTCCACGTGAATA
GCACCATTCCCGTCCCCGAAGGGAGCTTATACCGGGATCTTGAGCTCTAA
AACGGTCTTCCTTTTCGTCCACATCGCTGTGCTGAAGGACATTGCTGCTC
GGGCGCTAAGCTATCGGTTTTGGGATACCTGACAGTCGACGCTTGGCAGT
GACAGAACGCCGGAATCCATTCATCCGTTTAATAGGGAAGAGGGTGAAGA
AGAACATGAAAAAGGAAATAAAAAGAAAAAGCAAGGCAAGGCGGGAGATG
GTAAGATTCTGCAGCAAACTGCAATGCATTATGCAAGATTTTCTCCACGT
CACGTTTCTGCAGCTCTTCATGAGCTCTCCAGTCGAGCAGTATCTGATCA
CATACCCCCGGTCGCATCAGCGACAATCCTGGTTTAGCCGGCTTACAGAG
GTCTGCATTGGAATGTTATCTCTTCACCCCTCTTCACTCGTGTTCACTTC
CACCAATGGTGAAGAGCTGGACAACAAGTGGTGGGCGAAGGAGCATTCAG
CAGGGTGGCTAGGGAGATGATCCCTGTCAAGCTTGTGCATGCTGCTAACT
CCTTGGCTCACGAGACAACGCCACTCATATCTTCACCGCGAGAAGTGGTC
TCGAGGGAAGGTCTCGGGGAAGAAGAGCCGTCGGTCTCGCACCGCGAAAC
TCAAAAGGATCATCACTGAGACAGCGTTGAGTGGACCTCAACTGTTTGCC
TAGGAACTCCCAACTCACTTAGTCTCGACTTTGTGGGCCTGGAATAACCC
ATAATATGTCCGCACGGCTGACACGACACAAGACACGGCAGCCTACAACA
CTACAGTTTGAACCGTCTCTTTTTCCGTCTTTTAGGTTGGCCGGGAATGG
TTATGGCGCAAACGTTGCGGGGTTGTCTTTCGTGTCTCACTGTCGATCTC
AGGACTAGACTCAATGAGAGTCCCACTCGCCAAGCTTCTGTCATCTGCCT
TTAATTGGGGCATCTGCTCTTCTGACTTGTGATCCTTTTGTCCTTGTGAG
ACACTGTTCTTATCGCTGTGTCACAGCTGCCGACAGGGTGGTAATCTTGA
ATATACAATGGCCTCGACTGATCAGACGTGGGAATTCGTCGTTGTGGGTG
GTTAGTATGGAAGTCTCGTTCGTCGATCAGGACCTCACCTAACGATGCTA
TAGGTGGCCCGGCGGGCTGTGCCCTTGCTTCAAGGCTTGCTCGGTCAGCG
CGACGGCCTCAGGTCCTCCTGCTTGAAGCCGGCCCTCGTAACGATGATCC
ATCACTGCGTGTGGACGGCCAACGATGGCAGACCTTTATGAATGGAAACC
TGAACTGGGGGTACAAGACCACCCCACAAGAACACTGTAATGGCCGACAG
ATCGACTATTCTCGGGGCAAGGTCCTGGGCGGCAGCAGCGCCATCAACTT
CGGTGTCTACACCGTGGGTGCGCGAGACGACTATAACCAATGGGCTGGGC
TTGTTGGTGATGACCTGTTTCGCTGGGAGCGCATGCAGACTCGATTCAGA
CAGCTGGAAACATTTAACGGTGCCATTGTGGACCCGAAGAATAGCAAATA
TGCAGCCCCGAGGACCTCAGACCATGGCTCCCAAGGGAGTCTGAAGGTCG
GCTATGCTGCTGAATGGGAGCAGGATCTTCCCTTGATGATGGATGTCTTC
GAGCAGGCTGGCCTGGCTCGGAACCCTGACCACAACTCGGGAGACCCGAT
TGGCATGGCGTTGGTCATTAATTCATCCCACCAGGGTCGAAGAGTGACAG
CAACTGATCTTTTGGACGAAGCCCCGTCCAATTTGACTATCATAACGGAG
ACGCCAGCGCTCAGGCTCGTACTCCAAGGCACCAAGACTGTTGGTGTGGA
AACCAAGGGGGCAAAATGTATGTAATCGAGCTATTTTTCGAGCTGAACCG
TTCAACTAACCATGGCTTGTCGCTGCAGACTTCGCATCCAAAGAAGTGAT
TCTAACAACCGGATCACTGGACACGCCCAAGATTCTGATGCATTCGGGAC
TTGGACCAGCGGGACAACTACAACAATTCGGGATCCCCGTCGTCAAGGAC
ATGCCTGCGGTAGGCCAGGGTCTTCGGGACCACTTTTTCGCACCGCTGTG
CTTCCAACGAAACCCGACAACAAACGATCGCGATGCCTTCTTCGGTAACC
CGGCTGCTATGGAGTCAGCTCTGGAACAATGGAGCAAAGATGGCACCGGG
CCGTGGGCGCGGCACTCGTGCCAGATTGGCGCCGGCTGGCTCAAGTCCGA
CCGCTTGGTGGCATCTGAGGAATTCAAAGCACTGCCTCCGACAGTGCAGG
AATTCCTACAACGCGACACGGTGCCACACTACGAGTTCATGACACACTTC
CCGCTGCATCTCATCTCTCCCGAGCCTTTCATAGATTACAGCTACGTTTG
CATGCTCGTGTTTTTGATGAACGAGCAATCCAGCGGTGAAGTGCGTCTGC
AGTCAGCCAACCCTGAAGACCCGCTGCTGTTTGATCCAAAGTTCTTGTCC
CACCCGTTTGACAGGCGCGCATGTATTGAGATCTATCGGCACGCGCTGGA
GGTGACGAAGCATGAATCTTTCCAAAAAGACACCGTGTCCGCATTGATTG
CGCCCCCGTCCGAGTCGGATGAGGATATTCTTGAGTTCTGGAAGAACACC
CTCGGATCCAGTTGGCACATGACTGGAACGACCAAGATGGGTAAGTCCGG
GGATGCCGATGCTGTCGTGGACAGCCGGTTCCGGGTATTTGGTGTCGAGA
ATCTGCGGATCGCCGACATGGGTGTGGTGCCTGTTTTGACGAACAACCAC
ACACAGGCAACTGCGTATGTCACCGGTTTGACATGTGGAGATGCGCTGGC
AGAGGAATATGGGCTTGATACTTCGGAGGCTCGATTGTAGGTGGTATACA
AGACACGAAACAAGCACTGTCAGAAATTGCGATTGCTGTGAATCACTAGC
TCTCTAGATGGGTTTTCTCATCAGGATTTATGTCAACCATAACTTCCTGC
TCATATCTTTGGAGCTGGGACTCGGTGTATATGAATGAGAGTATTTGAAG
ATGGCACCGGTAATTCTCTGCCTGAGTCTCATCATTCCATCATCTTTCCG
TCTTTATGAGGCCAGTCGTGTACCTCATCAACACGAAAGAGGCATTTTAC
CCCTACGTAATTAGGCACGTAAGTACTTTTTCGGAGTTTTGTAGAAGTCC
ATCCCACGCAATCTTCTACCTGTC back to topCoding sequence (CDS) from alignment at ch1:2606638..2610461- >KJC3_001031-T1 ID=KJC3_001031-T1|Name=KJC3_001031-T1|organism=Aspergillus niger KJC3|type=CDS|length=5157bp|location=Sequence derived from alignment at ch1:2606638..2610461- (Aspergillus niger KJC3) ACTTCGCATCCAAAGAAGTGATTCTAACAACCGGATCACTGGACACGCCC AAGATTCTGATGCATTCGGGACTTGGACCAGCGGGACAACTACAACAATT CGGGATCCCCGTCGTCAAGGACATGCCTGCGGTAGGCCAGGGTCTTCGGG ACCACTTTTTCGCACCGCTGTGCTTCCAACGAAACCCGACAACAAACGAT CGCGATGCCTTCTTCGGTAACCCGGCTGCTATGGAGTCAGCTCTGGAACA ATGGAGCAAAGATGGCACCGGGCCGTGGGCGCGGCACTCGTGCCAGATTG GCGCCGGCTGGCTCAAGTCCGACCGCTTGGTGGCATCTGAGGAATTCAAA GCACTGCCTCCGACAGTGCAGGAATTCCTACAACGCGACACGGTGCCACA CTACGAGTTCATGACACACTTCCCGCTGCATCTCATCTCTCCCGAGCCTT TCATAGATTACAGCTACGTTTGCATGCTCGTGTTTTTGATGAACGAGCAA TCCAGCGGTGAAGTGCGTCTGCAGTCAGCCAACCCTGAAGACCCGCTGCT GTTTGATCCAAAGTTCTTGTCCCACCCGTTTGACAGGCGCGCATGTATTG AGATCTATCGGCACGCGCTGGAGGTGACGAAGCATGAATCTTTCCAAAAA GACACCGTGTCCGCATTGATTGCGCCCCCGTCCGAGTCGGATGAGGATAT TCTTGAGTTCTGGAAGAACACCCTCGGATCCAGTTGGCACATGACTGGAA CGACCAAGATGGGTAAGTCCGGGGATGCCGATGCTGTCGTGGACAGCCGG TTCCGGGTATTTGGTGTCGAGAATCTGCGGATCGCCGACATGGGTGTGGT GCCTGTTTTGACGAACAACCACACACAGGCAACTGCGTATGTCACCGGTT TGACATGTGGAGATGCGCTGGCAGAGGAATATGGGCTTGATACTTCGGAG GCTCGATTGTAGGTGGCCCGGCGGGCTGTGCCCTTGCTTCAAGGCTTGCT CGGTCAGCGCGACGGCCTCAGGTCCTCCTGCTTGAAGCCGGCCCTCGTAA CGATGATCCATCACTGCGTGTGGACGGCCAACGATGGCAGACCTTTATGA ATGGAAACCTGAACTGGGGGTACAAGACCACCCCACAAGAACACTGTAAT GGCCGACAGATCGACTATTCTCGGGGCAAGGTCCTGGGCGGCAGCAGCGC CATCAACTTCGGTGTCTACACCGTGGGTGCGCGAGACGACTATAACCAAT GGGCTGGGCTTGTTGGTGATGACCTGTTTCGCTGGGAGCGCATGCAGACT CGATTCAGACAGCTGGAAACATTTAACGGTGCCATTGTGGACCCGAAGAA TAGCAAATATGCAGCCCCGAGGACCTCAGACCATGGCTCCCAAGGGAGTC TGAAGGTCGGCTATGCTGCTGAATGGGAGCAGGATCTTCCCTTGATGATG GATGTCTTCGAGCAGGCTGGCCTGGCTCGGAACCCTGACCACAACTCGGG AGACCCGATTGGCATGGCGTTGGTCATTAATTCATCCCACCAGGGTCGAA GAGTGACAGCAACTGATCTTTTGGACGAAGCCCCGTCCAATTTGACTATC ATAACGGAGACGCCAGCGCTCAGGCTCGTACTCCAAGGCACCAAGACTGT TGGTGTGGAAACCAAGGGGGCAAAATATGGCCTCGACTGATCAGACGTGG GAATTCGTCGTTGTGGGTGACTTCGCATCCAAAGAAGTGATTCTAACAAC CGGATCACTGGACACGCCCAAGATTCTGATGCATTCGGGACTTGGACCAG CGGGACAACTACAACAATTCGGGATCCCCGTCGTCAAGGACATGCCTGCG GTAGGCCAGGGTCTTCGGGACCACTTTTTCGCACCGCTGTGCTTCCAACG AAACCCGACAACAAACGATCGCGATGCCTTCTTCGGTAACCCGGCTGCTA TGGAGTCAGCTCTGGAACAATGGAGCAAAGATGGCACCGGGCCGTGGGCG CGGCACTCGTGCCAGATTGGCGCCGGCTGGCTCAAGTCCGACCGCTTGGT GGCATCTGAGGAATTCAAAGCACTGCCTCCGACAGTGCAGGAATTCCTAC AACGCGACACGGTGCCACACTACGAGTTCATGACACACTTCCCGCTGCAT CTCATCTCTCCCGAGCCTTTCATAGATTACAGCTACGTTTGCATGCTCGT GTTTTTGATGAACGAGCAATCCAGCGGTGAAGTGCGTCTGCAGTCAGCCA ACCCTGAAGACCCGCTGCTGTTTGATCCAAAGTTCTTGTCCCACCCGTTT GACAGGCGCGCATGTATTGAGATCTATCGGCACGCGCTGGAGGTGACGAA GCATGAATCTTTCCAAAAAGACACCGTGTCCGCATTGATTGCGCCCCCGT CCGAGTCGGATGAGGATATTCTTGAGTTCTGGAAGAACACCCTCGGATCC AGTTGGCACATGACTGGAACGACCAAGATGGGTAAGTCCGGGGATGCCGA TGCTGTCGTGGACAGCCGGTTCCGGGTATTTGGTGTCGAGAATCTGCGGA TCGCCGACATGGGTGTGGTGCCTGTTTTGACGAACAACCACACACAGGCA ACTGCGTATGTCACCGGTTTGACATGTGGAGATGCGCTGGCAGAGGAATA TGGGCTTGATACTTCGGAGGCTCGATTGTAGGTGGCCCGGCGGGCTGTGC CCTTGCTTCAAGGCTTGCTCGGTCAGCGCGACGGCCTCAGGTCCTCCTGC TTGAAGCCGGCCCTCGTAACGATGATCCATCACTGCGTGTGGACGGCCAA CGATGGCAGACCTTTATGAATGGAAACCTGAACTGGGGGTACAAGACCAC CCCACAAGAACACTGTAATGGCCGACAGATCGACTATTCTCGGGGCAAGG TCCTGGGCGGCAGCAGCGCCATCAACTTCGGTGTCTACACCGTGGGTGCG CGAGACGACTATAACCAATGGGCTGGGCTTGTTGGTGATGACCTGTTTCG CTGGGAGCGCATGCAGACTCGATTCAGACAGCTGGAAACATTTAACGGTG CCATTGTGGACCCGAAGAATAGCAAATATGCAGCCCCGAGGACCTCAGAC CATGGCTCCCAAGGGAGTCTGAAGGTCGGCTATGCTGCTGAATGGGAGCA GGATCTTCCCTTGATGATGGATGTCTTCGAGCAGGCTGGCCTGGCTCGGA ACCCTGACCACAACTCGGGAGACCCGATTGGCATGGCGTTGGTCATTAAT TCATCCCACCAGGGTCGAAGAGTGACAGCAACTGATCTTTTGGACGAAGC CCCGTCCAATTTGACTATCATAACGGAGACGCCAGCGCTCAGGCTCGTAC TCCAAGGCACCAAGACTGTTGGTGTGGAAACCAAGGGGGCAAAATATGGC CTCGACTGATCAGACGTGGGAATTCGTCGTTGTGGGTGACTTCGCATCCA AAGAAGTGATTCTAACAACCGGATCACTGGACACGCCCAAGATTCTGATG CATTCGGGACTTGGACCAGCGGGACAACTACAACAATTCGGGATCCCCGT CGTCAAGGACATGCCTGCGGTAGGCCAGGGTCTTCGGGACCACTTTTTCG CACCGCTGTGCTTCCAACGAAACCCGACAACAAACGATCGCGATGCCTTC TTCGGTAACCCGGCTGCTATGGAGTCAGCTCTGGAACAATGGAGCAAAGA TGGCACCGGGCCGTGGGCGCGGCACTCGTGCCAGATTGGCGCCGGCTGGC TCAAGTCCGACCGCTTGGTGGCATCTGAGGAATTCAAAGCACTGCCTCCG ACAGTGCAGGAATTCCTACAACGCGACACGGTGCCACACTACGAGTTCAT GACACACTTCCCGCTGCATCTCATCTCTCCCGAGCCTTTCATAGATTACA GCTACGTTTGCATGCTCGTGTTTTTGATGAACGAGCAATCCAGCGGTGAA GTGCGTCTGCAGTCAGCCAACCCTGAAGACCCGCTGCTGTTTGATCCAAA GTTCTTGTCCCACCCGTTTGACAGGCGCGCATGTATTGAGATCTATCGGC ACGCGCTGGAGGTGACGAAGCATGAATCTTTCCAAAAAGACACCGTGTCC GCATTGATTGCGCCCCCGTCCGAGTCGGATGAGGATATTCTTGAGTTCTG GAAGAACACCCTCGGATCCAGTTGGCACATGACTGGAACGACCAAGATGG GTAAGTCCGGGGATGCCGATGCTGTCGTGGACAGCCGGTTCCGGGTATTT GGTGTCGAGAATCTGCGGATCGCCGACATGGGTGTGGTGCCTGTTTTGAC GAACAACCACACACAGGCAACTGCGTATGTCACCGGTTTGACATGTGGAG ATGCGCTGGCAGAGGAATATGGGCTTGATACTTCGGAGGCTCGATTGTAG GTGGCCCGGCGGGCTGTGCCCTTGCTTCAAGGCTTGCTCGGTCAGCGCGA CGGCCTCAGGTCCTCCTGCTTGAAGCCGGCCCTCGTAACGATGATCCATC ACTGCGTGTGGACGGCCAACGATGGCAGACCTTTATGAATGGAAACCTGA ACTGGGGGTACAAGACCACCCCACAAGAACACTGTAATGGCCGACAGATC GACTATTCTCGGGGCAAGGTCCTGGGCGGCAGCAGCGCCATCAACTTCGG TGTCTACACCGTGGGTGCGCGAGACGACTATAACCAATGGGCTGGGCTTG TTGGTGATGACCTGTTTCGCTGGGAGCGCATGCAGACTCGATTCAGACAG CTGGAAACATTTAACGGTGCCATTGTGGACCCGAAGAATAGCAAATATGC AGCCCCGAGGACCTCAGACCATGGCTCCCAAGGGAGTCTGAAGGTCGGCT ATGCTGCTGAATGGGAGCAGGATCTTCCCTTGATGATGGATGTCTTCGAG CAGGCTGGCCTGGCTCGGAACCCTGACCACAACTCGGGAGACCCGATTGG CATGGCGTTGGTCATTAATTCATCCCACCAGGGTCGAAGAGTGACAGCAA CTGATCTTTTGGACGAAGCCCCGTCCAATTTGACTATCATAACGGAGACG CCAGCGCTCAGGCTCGTACTCCAAGGCACCAAGACTGTTGGTGTGGAAAC CAAGGGGGCAAAATATGGCCTCGACTGATCAGACGTGGGAATTCGTCGTT GTGGGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0016614 | oxidoreductase activity, acting on CH-OH group of donors |
GO:0050660 | flavin adenine dinucleotide binding |
Vocabulary: Biological Process
Term | Definition |
GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001031-T1.utr3p1 | KJC3_001031-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_001031-T1.utr5p1 | KJC3_001031-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
Note | CAZy:AA3_3 |
Note | CAZy:AA3 |
Note | CAZy:AA3_2 |
DBxref | InterPro:IPR007867 |
DBxref | InterPro:IPR012132 |
DBxref | InterPro:IPR000172 |
DBxref | InterPro:IPR036188 |
DBxref | PFAM:PF00732 |
DBxref | PFAM:PF05199 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch1 | supercontig | ch1:2606638..2610461 - |
|