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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2627663..2629466+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001037-T1 ID=KJC3_001037-T1|Name=KJC3_001037-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1804bp|location=Sequence derived from alignment at ch1:2627663..2629466+ (Aspergillus niger KJC3)
TGACGTTGACGTCGATGGAGTCCGTCAGTCGCTCTCACTTTCTGCCTGCA
TCCACTTACTCGCTCTTCCCTCTTCACGGCTTCCTCTCCGCCTCTCTTTT
CCTTTCCTTCCCTCTCTTTCTCTTCTCTCCATTCCACCCTGGTCTCTCTT
TCAGCTTCCTATTTTTCCAGCTACCATGTCCTTCTCCTAGTGCGACCTGT
ATTATTCGATTAGGTTACTACCAAACACACTCCCTAGGCAGATAGCCCGT
CATGGTGTCCCTGTGGCCCTTCAGGGTAAGTCCCCATCACCGCCAGTCTC
CAATCCACCAACTCACAATTAAACCTCATTCTCAGGCCGAGGACACCTCT
CCAGCATCCTTTGAAAAAGCCCTCGCCGCACTCTCCACCAAGATCACTCG
AGCCACCACCCGTCTCGACCTCCACCGTCAACATGCCCGTCGCTTCAAGG
CCCTCTGGACCCTCTACACTACCTTCGCCTACCTCCTCTATTCTATCATC
ATTGCTCTAGTCCTCGGGTGGCAGAATTGGGGAATCACAGAATACGGCGC
GATTATCGGTGGTCCAATCCTGTACGTCCACAATTCCCCCTGATCTACTC
CCTCACTGCGACCTGCCACCCCCCACTCCACCCCTATTGCGGAGCGTCAC
ACCTGCATCACTACTCCTAACCACCATTCCCATACAGGATCTACCTCATC
CGCACCATCTCCACCCGCTACTATGACTATCGCATCACCAAAACCCAAGC
CTACCTCGACGATCTCCATAAGCAGCGTGAGAAAACCATCGAGGATCTAA
AGACCGCCACGCGCTGGAATTCCACCCAACAGCTGCTGGAGAAGTATGGT
GGGGAGTCGCCGAAGCCCGCGCGCTCGAACTCGGTCAAATCTGGCGACGC
AAAGCGCAACAAGTCCGAGGGAGCGAAGCGCAAACAGCCATCCCAGCAGC
AGCAGCAGCATGTCCAGCGCACGGGTATCCCCCCGCCCCCGACAGCGAAT
ATTCGACGACCAGCACCGCAACAATTCCCCTCCTCTCCTCAACCACCTTC
CACCCCGCCGGTCGCATTCCAGCACCACCAACAGTCTCCGCACGTGTTCC
CAGGTCAGCAACAACTACAACAGCAGCAGCAGAGTGCACCAAGCATGAAC
GTGGGCCTCGAAGAACCCGGATTCGCTCCGAACGCATTCTCCAGCACGTC
TACGCAGTATGTGGAACAGTCTCACTGGTACGACCGCCTGCTGGACGTAT
TGCTAGGCGAGGATGAAACCCAGCCTAAGAACCGGCTCGCGTTGATCTGC
TCCACCTGTCGACTGGTGAATGGTCAGGCGCCCCCAGGTATCAAGACGCT
CGAAGAACTAGGCCGTTGGCGTTGCGGGAACTGTGGCGCATGGAACGGTG
AGGAAAGCGAAGCGAAGAAGGTCCTGGCGGGTATCCGCAAGGAGCAGCAG
CAGCAGTCGTCCAATATCTCTAGTGGCAGTGTTGATGGTACAGAGACTCG
CTCGTCCGTGGGAGGAGATGTAACGGATGACGGCGTCATGGTGGCTGCTA
CTGGTAGCGAGGATGATCAGCTCGAGTCGCAGAGTGAGGGAGCCGAGACA
TCAGAGGAACAGGTAGAGCAGGTAGCAGAGAGTGAGAATGAGGAAGAGGA
AGAACCTGAGCCACAACCCAGTAAAAGGGTGACGCGGTCTCGAGCTAAGG
GTGGGAAAAGGAAGGGATAACGATATGCTGATACAGGCTATTTTGCAATG
TAGTTAGGTTCTTCGTGTGGCATCGTTATCAATACCAGATCATGTTATCC
AGAC back to topCoding sequence (CDS) from alignment at ch1:2627663..2629466+ >KJC3_001037-T1 ID=KJC3_001037-T1|Name=KJC3_001037-T1|organism=Aspergillus niger KJC3|type=CDS|length=3879bp|location=Sequence derived from alignment at ch1:2627663..2629466+ (Aspergillus niger KJC3)
ATGGTGTCCCTGTGGCCCTTCAGGGCCGAGGACACCTCTCCAGCATCCTT
TGAAAAAGCCCTCGCCGCACTCTCCACCAAGATCACTCGAGCCACCACCC
GTCTCGACCTCCACCGTCAACATGCCCGTCGCTTCAAGGCCCTCTGGACC
CTCTACACTACCTTCGCCTACCTCCTCTATTCTATCATCATTGCTCTAGT
CCTCGGGTGGCAGAATTGGGGAATCACAGAATACGGCGCGATTATCGGTG
GTCCAATCCTGATCTACCTCATCCGCACCATCTCCACCCGCTACTATGAC
TATCGCATCACCAAAACCCAAGCCTACCTCGACGATCTCCATAAGCAGCG
TGAGAAAACCATCGAGGATCTAAAGACCGCCACGCGCTGGAATTCCACCC
AACAGCTGCTGGAGAAGTATGGTGGGGAGTCGCCGAAGCCCGCGCGCTCG
AACTCGGTCAAATCTGGCGACGCAAAGCGCAACAAGTCCGAGGGAGCGAA
GCGCAAACAGCCATCCCAGCAGCAGCAGCAGCATGTCCAGCGCACGGGTA
TCCCCCCGCCCCCGACAGCGAATATTCGACGACCAGCACCGCAACAATTC
CCCTCCTCTCCTCAACCACCTTCCACCCCGCCGGTCGCATTCCAGCACCA
CCAACAGTCTCCGCACGTGTTCCCAGGTCAGCAACAACTACAACAGCAGC
AGCAGAGTGCACCAAGCATGAACGTGGGCCTCGAAGAACCCGGATTCGCT
CCGAACGCATTCTCCAGCACGTCTACGCAGTATGTGGAACAGTCTCACTG
GTACGACCGCCTGCTGGACGTATTGCTAGGCGAGGATGAAACCCAGCCTA
AGAACCGGCTCGCGTTGATCTGCTCCACCTGTCGACTGGTGAATGGTCAG
GCGCCCCCAGGTATCAAGACGCTCGAAGAACTAGGCCGTTGGCGTTGCGG
GAACTGTGGCGCATGGAACGGTGAGGAAAGCGAAGCGAAGAAGGTCCTGG
CGGGTATCCGCAAGGAGCAGCAGCAGCAGTCGTCCAATATCTCTAGTGGC
AGTGTTGATGGTACAGAGACTCGCTCGTCCGTGGGAGGAGATGTAACGGA
TGACGGCGTCATGGTGGCTGCTACTGGTAGCGAGGATGATCAGCTCGAGT
CGCAGAGTGAGGGAGCCGAGACATCAGAGGAACAGGTAGAGCAGGTAGCA
GAGAGTGAGAATGAGGAAGAGGAAGAACCTGAGCCACAACCCAGTAAAAG
GGTGACGCGGTCTCGAGCTAAGGGTGGGAAAAGGAAGGGATAAATGGTGT
CCCTGTGGCCCTTCAGGGCCGAGGACACCTCTCCAGCATCCTTTGAAAAA
GCCCTCGCCGCACTCTCCACCAAGATCACTCGAGCCACCACCCGTCTCGA
CCTCCACCGTCAACATGCCCGTCGCTTCAAGGCCCTCTGGACCCTCTACA
CTACCTTCGCCTACCTCCTCTATTCTATCATCATTGCTCTAGTCCTCGGG
TGGCAGAATTGGGGAATCACAGAATACGGCGCGATTATCGGTGGTCCAAT
CCTGATCTACCTCATCCGCACCATCTCCACCCGCTACTATGACTATCGCA
TCACCAAAACCCAAGCCTACCTCGACGATCTCCATAAGCAGCGTGAGAAA
ACCATCGAGGATCTAAAGACCGCCACGCGCTGGAATTCCACCCAACAGCT
GCTGGAGAAGTATGGTGGGGAGTCGCCGAAGCCCGCGCGCTCGAACTCGG
TCAAATCTGGCGACGCAAAGCGCAACAAGTCCGAGGGAGCGAAGCGCAAA
CAGCCATCCCAGCAGCAGCAGCAGCATGTCCAGCGCACGGGTATCCCCCC
GCCCCCGACAGCGAATATTCGACGACCAGCACCGCAACAATTCCCCTCCT
CTCCTCAACCACCTTCCACCCCGCCGGTCGCATTCCAGCACCACCAACAG
TCTCCGCACGTGTTCCCAGGTCAGCAACAACTACAACAGCAGCAGCAGAG
TGCACCAAGCATGAACGTGGGCCTCGAAGAACCCGGATTCGCTCCGAACG
CATTCTCCAGCACGTCTACGCAGTATGTGGAACAGTCTCACTGGTACGAC
CGCCTGCTGGACGTATTGCTAGGCGAGGATGAAACCCAGCCTAAGAACCG
GCTCGCGTTGATCTGCTCCACCTGTCGACTGGTGAATGGTCAGGCGCCCC
CAGGTATCAAGACGCTCGAAGAACTAGGCCGTTGGCGTTGCGGGAACTGT
GGCGCATGGAACGGTGAGGAAAGCGAAGCGAAGAAGGTCCTGGCGGGTAT
CCGCAAGGAGCAGCAGCAGCAGTCGTCCAATATCTCTAGTGGCAGTGTTG
ATGGTACAGAGACTCGCTCGTCCGTGGGAGGAGATGTAACGGATGACGGC
GTCATGGTGGCTGCTACTGGTAGCGAGGATGATCAGCTCGAGTCGCAGAG
TGAGGGAGCCGAGACATCAGAGGAACAGGTAGAGCAGGTAGCAGAGAGTG
AGAATGAGGAAGAGGAAGAACCTGAGCCACAACCCAGTAAAAGGGTGACG
CGGTCTCGAGCTAAGGGTGGGAAAAGGAAGGGATAAATGGTGTCCCTGTG
GCCCTTCAGGGCCGAGGACACCTCTCCAGCATCCTTTGAAAAAGCCCTCG
CCGCACTCTCCACCAAGATCACTCGAGCCACCACCCGTCTCGACCTCCAC
CGTCAACATGCCCGTCGCTTCAAGGCCCTCTGGACCCTCTACACTACCTT
CGCCTACCTCCTCTATTCTATCATCATTGCTCTAGTCCTCGGGTGGCAGA
ATTGGGGAATCACAGAATACGGCGCGATTATCGGTGGTCCAATCCTGATC
TACCTCATCCGCACCATCTCCACCCGCTACTATGACTATCGCATCACCAA
AACCCAAGCCTACCTCGACGATCTCCATAAGCAGCGTGAGAAAACCATCG
AGGATCTAAAGACCGCCACGCGCTGGAATTCCACCCAACAGCTGCTGGAG
AAGTATGGTGGGGAGTCGCCGAAGCCCGCGCGCTCGAACTCGGTCAAATC
TGGCGACGCAAAGCGCAACAAGTCCGAGGGAGCGAAGCGCAAACAGCCAT
CCCAGCAGCAGCAGCAGCATGTCCAGCGCACGGGTATCCCCCCGCCCCCG
ACAGCGAATATTCGACGACCAGCACCGCAACAATTCCCCTCCTCTCCTCA
ACCACCTTCCACCCCGCCGGTCGCATTCCAGCACCACCAACAGTCTCCGC
ACGTGTTCCCAGGTCAGCAACAACTACAACAGCAGCAGCAGAGTGCACCA
AGCATGAACGTGGGCCTCGAAGAACCCGGATTCGCTCCGAACGCATTCTC
CAGCACGTCTACGCAGTATGTGGAACAGTCTCACTGGTACGACCGCCTGC
TGGACGTATTGCTAGGCGAGGATGAAACCCAGCCTAAGAACCGGCTCGCG
TTGATCTGCTCCACCTGTCGACTGGTGAATGGTCAGGCGCCCCCAGGTAT
CAAGACGCTCGAAGAACTAGGCCGTTGGCGTTGCGGGAACTGTGGCGCAT
GGAACGGTGAGGAAAGCGAAGCGAAGAAGGTCCTGGCGGGTATCCGCAAG
GAGCAGCAGCAGCAGTCGTCCAATATCTCTAGTGGCAGTGTTGATGGTAC
AGAGACTCGCTCGTCCGTGGGAGGAGATGTAACGGATGACGGCGTCATGG
TGGCTGCTACTGGTAGCGAGGATGATCAGCTCGAGTCGCAGAGTGAGGGA
GCCGAGACATCAGAGGAACAGGTAGAGCAGGTAGCAGAGAGTGAGAATGA
GGAAGAGGAAGAACCTGAGCCACAACCCAGTAAAAGGGTGACGCGGTCTC
GAGCTAAGGGTGGGAAAAGGAAGGGATAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001037-T1.utr5p1 | KJC3_001037-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001037-T1.utr3p1 | KJC3_001037-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019273 |
| DBxref | PFAM:PF10058 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2627663..2629466 + |
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