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KJC3_001039-T1, KJC3_001039-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001039-T1
Unique NameKJC3_001039-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2634745..2637119-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001039-T1 ID=KJC3_001039-T1|Name=KJC3_001039-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2375bp|location=Sequence derived from alignment at ch1:2634745..2637119- (Aspergillus niger KJC3)
CTAATCTTCCCTTTCCCTCTCGCCCCCCTCCCACTCTCGGTCTGTCTTCC
CAGCACTTCCCGTCACAAGTCGCTGCTTACGAGATCACTGCCCTCTCATA
ACTAATCTGCCCACACCCACTTTCCCCCCCGGTTATCGCCAATAATAGTC
AGCAGTCAAACTGCAATCCAGCTTAGTTAGTCAGTTAAGGCCTCCGCGTG
AGCAGCCTTTCCCAAATCTCCCCTGCCTAGCGAAAACGAGCTATCTCCGA
ACTGGTGCTCGCGCTCTCGTCTCTGCTTACCTCATCGTCCTTCCCCCGTT
TATCCTACATCGTTTCTCTACATCCTCGCCTCCCCCCTCGAAACCCCCAA
AGAAAACGTGCGAATAGACTGGCCGAGCTCGTCGTCCGCCCTTCTGCCCT
TCGTGAATTGGTCCTGTCGTGTCTTTTTTCCGGCGCGTCTCCGTTGTCTT
TTGACCTGTTGCCTCGATGCAGCCCACACTAGCCCCAGCGCCGCATCCAA
GTATGCAAACGTCTGCTCAGGTAAGCAGCCTATGCTTGTCGCGGTTTGTC
ATCAGATCGCGTCTGTCCCATCCTGTCTTTCCCCGTTTCCCCAGATTCGC
GCAGCTCATGACCCGAGCCGGGAGCTTGAGCTTTCTGGTCGTGTTCGCGA
CTGCTGTCGCCCTGTCTGTCGGATGAGCGATGCCGGATCACACCCATGTT
TTCGCGACACGGGGGCCTTGACATGCTCACCGGTCGCGTCAATCCGGTGT
AGATGAATCACCAAGTATATAGATGCTAACTGTGGAGTTTCTTACTAGGA
CCATGCGGATCAGGGTAAGTGAGAACAGCCTCTCATCGCGAAGAAAAGGG
GAGAAAAAGAGATGAGCAGGAGGAAAATTGCCCCAGCAGTCATCGCGTCA
TCGCGTTTGCGGGTTGCTTACTGCCTCACTCCACTTCCCTGGCCTCGTAT
GTGTTTACACCGAATGCTGACTCGCGTCTGTAATCTCCAGTGCTGCATGA
CCAGCTCCTAGCTGCTCATCAACATCTGTCGCACCCACAGCAGGCACGTC
CGCAAGGTCCGACCGCGCAGCCTCCGCATATGCAACCCAACACCACTAGT
CCTCGAGACCAGAACAACATCGACCCTGCCATCTCCGGCGCTGCCATGCT
CAGTGGTCCTCCCCAAACTCCTCCCCAGCCAGAGCCTACGGGCCAGGAAT
CCCCAAAGACTTATGGCAAGCGACCGCTGTCGACTTCCAAGCGCGCTGCC
CAGAACCGCGCCGCACAGGTATAGTGAACTCTAATGCCTGCGGATCAAGA
GCTTGAACTGACCAGATCCAGAGAGCTTTCCGTCAACGCAAGGAGAGCTA
TATTCGCAAGCTGGAGGAGCAAGTGAAGGAGTTTGATAACACAAACGAGA
CCATGAAGCAGCTGCAAGCTGAGAACTACCAGCTCCGTGAATATATCATC
AACCTGCAATCGCGCCTGTTGGACTCCCAGGGCGAGGTTCCCGAGCTTCC
CGGCAACATTGACCTGAACCAGCCACGGAATGACATCTCTGTTCCCCCGC
CGGGGGCTCCGGCGGCCACCGGTCCCGCGCCAGGTCCTGGTGGTGCTCCG
CAGCAAATGCAGGTCCCCAACCCCGGTGCTGCCACGAACGAAGACATGAA
CTCGCTGAATCGCATCGCGGTTGCTGGCCTGGGAATGCGCAAGCACCCCA
ATGAGGAAGCGAACTTCCTGGGGAACAACTTCCAGGCTCGCCGCCCGCGC
AACGACGACGGGCAGCCCGATGGGTCTGAAGCAACGAAAACGGAGCCTGG
TCACGGGTTGCCCGTTGTATCATGAGTGAATCAGATGTATCCGAACTCGA
TATTACCCCTGATTGTTGTCGCCATTCCTGTATTCTGTTGATTGCGAACG
CCCGAGATATATCATCAGCTCCTTGCTTTTCTGTTTCGATATTCCTACCG
TTGTCGTATCTTCTGGTGTATGGCGTGATGTAACTAGGTATCCATTCTGG
CCTCGGAAGGAGCGGTGTTTTGTGCTTTTCATATTTGATGTCCATCCACA
GCGTCAGCCACAGGAGTCTCCTGGGAAAGAAGAGGTGTTACCATTGTTGT
TAATGCTCCTGGTGATTCTTTTCCCGTCTGCCGGTTGCTCGATGCATTGG
CAGTGGGCGGAGGAGGCTTCTGGTATTTCCTCGTTCAACACTTGCATATG
ATGTTTGTTAGAGAGGGCCTTCCTGTGCCTCCGACGAGGACAAGGGGTCC
AGGAAACAGACTGCTCGACTTGCTTATAGTAATCCATCTGTGTCTGCTCC
TATGCACATGCTGCTCTCTTTATCGTCCTTATGTGACAGTCAAAGACATA
ACCGAATTATCATCATATTCCGAAC
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Coding sequence (CDS) from alignment at ch1:2634745..2637119-

>KJC3_001039-T1 ID=KJC3_001039-T1|Name=KJC3_001039-T1|organism=Aspergillus niger KJC3|type=CDS|length=3408bp|location=Sequence derived from alignment at ch1:2634745..2637119- (Aspergillus niger KJC3)
AGAGCTTTCCGTCAACGCAAGGAGAGCTATATTCGCAAGCTGGAGGAGCA
AGTGAAGGAGTTTGATAACACAAACGAGACCATGAAGCAGCTGCAAGCTG
AGAACTACCAGCTCCGTGAATATATCATCAACCTGCAATCGCGCCTGTTG
GACTCCCAGGGCGAGGTTCCCGAGCTTCCCGGCAACATTGACCTGAACCA
GCCACGGAATGACATCTCTGTTCCCCCGCCGGGGGCTCCGGCGGCCACCG
GTCCCGCGCCAGGTCCTGGTGGTGCTCCGCAGCAAATGCAGGTCCCCAAC
CCCGGTGCTGCCACGAACGAAGACATGAACTCGCTGAATCGCATCGCGGT
TGCTGGCCTGGGAATGCGCAAGCACCCCAATGAGGAAGCGAACTTCCTGG
GGAACAACTTCCAGGCTCGCCGCCCGCGCAACGACGACGGGCAGCCCGAT
GGGTCTGAAGCAACGAAAACGGAGCCTGGTCACGGGTTGCCCGTTGTATC
ATGATGCTGCATGACCAGCTCCTAGCTGCTCATCAACATCTGTCGCACCC
ACAGCAGGCACGTCCGCAAGGTCCGACCGCGCAGCCTCCGCATATGCAAC
CCAACACCACTAGTCCTCGAGACCAGAACAACATCGACCCTGCCATCTCC
GGCGCTGCCATGCTCAGTGGTCCTCCCCAAACTCCTCCCCAGCCAGAGCC
TACGGGCCAGGAATCCCCAAAGACTTATGGCAAGCGACCGCTGTCGACTT
CCAAGCGCGCTGCCCAGAACCGCGCCGCACAGGACCATGCGGATCAGGAT
GCAGCCCACACTAGCCCCAGCGCCGCATCCAAGTATGCAAACGTCTGCTC
AGAGAGCTTTCCGTCAACGCAAGGAGAGCTATATTCGCAAGCTGGAGGAG
CAAGTGAAGGAGTTTGATAACACAAACGAGACCATGAAGCAGCTGCAAGC
TGAGAACTACCAGCTCCGTGAATATATCATCAACCTGCAATCGCGCCTGT
TGGACTCCCAGGGCGAGGTTCCCGAGCTTCCCGGCAACATTGACCTGAAC
CAGCCACGGAATGACATCTCTGTTCCCCCGCCGGGGGCTCCGGCGGCCAC
CGGTCCCGCGCCAGGTCCTGGTGGTGCTCCGCAGCAAATGCAGGTCCCCA
ACCCCGGTGCTGCCACGAACGAAGACATGAACTCGCTGAATCGCATCGCG
GTTGCTGGCCTGGGAATGCGCAAGCACCCCAATGAGGAAGCGAACTTCCT
GGGGAACAACTTCCAGGCTCGCCGCCCGCGCAACGACGACGGGCAGCCCG
ATGGGTCTGAAGCAACGAAAACGGAGCCTGGTCACGGGTTGCCCGTTGTA
TCATGATGCTGCATGACCAGCTCCTAGCTGCTCATCAACATCTGTCGCAC
CCACAGCAGGCACGTCCGCAAGGTCCGACCGCGCAGCCTCCGCATATGCA
ACCCAACACCACTAGTCCTCGAGACCAGAACAACATCGACCCTGCCATCT
CCGGCGCTGCCATGCTCAGTGGTCCTCCCCAAACTCCTCCCCAGCCAGAG
CCTACGGGCCAGGAATCCCCAAAGACTTATGGCAAGCGACCGCTGTCGAC
TTCCAAGCGCGCTGCCCAGAACCGCGCCGCACAGGACCATGCGGATCAGG
ATGCAGCCCACACTAGCCCCAGCGCCGCATCCAAGTATGCAAACGTCTGC
TCAGAGAGCTTTCCGTCAACGCAAGGAGAGCTATATTCGCAAGCTGGAGG
AGCAAGTGAAGGAGTTTGATAACACAAACGAGACCATGAAGCAGCTGCAA
GCTGAGAACTACCAGCTCCGTGAATATATCATCAACCTGCAATCGCGCCT
GTTGGACTCCCAGGGCGAGGTTCCCGAGCTTCCCGGCAACATTGACCTGA
ACCAGCCACGGAATGACATCTCTGTTCCCCCGCCGGGGGCTCCGGCGGCC
ACCGGTCCCGCGCCAGGTCCTGGTGGTGCTCCGCAGCAAATGCAGGTCCC
CAACCCCGGTGCTGCCACGAACGAAGACATGAACTCGCTGAATCGCATCG
CGGTTGCTGGCCTGGGAATGCGCAAGCACCCCAATGAGGAAGCGAACTTC
CTGGGGAACAACTTCCAGGCTCGCCGCCCGCGCAACGACGACGGGCAGCC
CGATGGGTCTGAAGCAACGAAAACGGAGCCTGGTCACGGGTTGCCCGTTG
TATCATGATGCTGCATGACCAGCTCCTAGCTGCTCATCAACATCTGTCGC
ACCCACAGCAGGCACGTCCGCAAGGTCCGACCGCGCAGCCTCCGCATATG
CAACCCAACACCACTAGTCCTCGAGACCAGAACAACATCGACCCTGCCAT
CTCCGGCGCTGCCATGCTCAGTGGTCCTCCCCAAACTCCTCCCCAGCCAG
AGCCTACGGGCCAGGAATCCCCAAAGACTTATGGCAAGCGACCGCTGTCG
ACTTCCAAGCGCGCTGCCCAGAACCGCGCCGCACAGGACCATGCGGATCA
GGATGCAGCCCACACTAGCCCCAGCGCCGCATCCAAGTATGCAAACGTCT
GCTCAGAGAGCTTTCCGTCAACGCAAGGAGAGCTATATTCGCAAGCTGGA
GGAGCAAGTGAAGGAGTTTGATAACACAAACGAGACCATGAAGCAGCTGC
AAGCTGAGAACTACCAGCTCCGTGAATATATCATCAACCTGCAATCGCGC
CTGTTGGACTCCCAGGGCGAGGTTCCCGAGCTTCCCGGCAACATTGACCT
GAACCAGCCACGGAATGACATCTCTGTTCCCCCGCCGGGGGCTCCGGCGG
CCACCGGTCCCGCGCCAGGTCCTGGTGGTGCTCCGCAGCAAATGCAGGTC
CCCAACCCCGGTGCTGCCACGAACGAAGACATGAACTCGCTGAATCGCAT
CGCGGTTGCTGGCCTGGGAATGCGCAAGCACCCCAATGAGGAAGCGAACT
TCCTGGGGAACAACTTCCAGGCTCGCCGCCCGCGCAACGACGACGGGCAG
CCCGATGGGTCTGAAGCAACGAAAACGGAGCCTGGTCACGGGTTGCCCGT
TGTATCATGATGCTGCATGACCAGCTCCTAGCTGCTCATCAACATCTGTC
GCACCCACAGCAGGCACGTCCGCAAGGTCCGACCGCGCAGCCTCCGCATA
TGCAACCCAACACCACTAGTCCTCGAGACCAGAACAACATCGACCCTGCC
ATCTCCGGCGCTGCCATGCTCAGTGGTCCTCCCCAAACTCCTCCCCAGCC
AGAGCCTACGGGCCAGGAATCCCCAAAGACTTATGGCAAGCGACCGCTGT
CGACTTCCAAGCGCGCTGCCCAGAACCGCGCCGCACAGGACCATGCGGAT
CAGGATGCAGCCCACACTAGCCCCAGCGCCGCATCCAAGTATGCAAACGT
CTGCTCAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003700DNA-binding transcription factor activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001039KJC3_001039Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001039-T1KJC3_001039-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001039-T1.cdsKJC3_001039-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001039-T1.utr3p1KJC3_001039-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001039-T1.exon4KJC3_001039-T1.exon4Aspergillus niger KJC3exon
KJC3_001039-T1.exon3KJC3_001039-T1.exon3Aspergillus niger KJC3exon
KJC3_001039-T1.exon2KJC3_001039-T1.exon2Aspergillus niger KJC3exon
KJC3_001039-T1.exon1KJC3_001039-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001039-T1.utr5p1KJC3_001039-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR004827
DBxrefPFAM:PF00170
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2634745..2637119 -
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