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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2638219..2641141- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001040-T2 ID=KJC3_001040-T2|Name=KJC3_001040-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2923bp|location=Sequence derived from alignment at ch1:2638219..2641141- (Aspergillus niger KJC3)
TGGTGACGTCGTCATCGCGGCGTAGATCCCCTGGGAAAAACGGTAGCTCC
TCCTAATCACTAGATTACTATTAATTACTCCTAGTAGATCCCGCTCCCCT
GGGATACTCTCGATGCTTGTCGACGGTGCTCCCTGTTCGTACTGATGATT
CCCTGATTCCGCTCCACACTTCCTCCCTTCCCTTTCAATGGCTTCCACTA
TCCCTCGGGACCCTGTGCATAGCAATCACTATGTGGACTACGTGATTCGC
TACAACTTTGGTGGTGAGACTGGTAAGATGGCGGTGTGCCCCAGGCCAGC
AATTCCCGGTGTCGCTCCGACCTAACCACCATTGTACTTAGACGCCGCCC
ATGCGACTGAGCAACTCGATCGACTGCTGCGGAAGCTCTTCGAGGTTGGA
CTGCAGACCGAAGTGAGGCAAGGGGACGAATCGTCGCTGTTGATATTCGT
CCGAGCGTCACGGAAGAAGAGCCTGAAGCGCGCCATCTATCAATCACGGT
GAGCGCTTGCTGTTTGTATGGTCGGGTCTTATTATCTCTTACTGATCCGT
GGATGTTATTTCTCCTAGCATTCGCGATTGGCTCTATGGCGTCCGCAATA
ACGAACCCGAATCAGAGTCCTCGGCGGAGGCCCAGTCGGAATCGGAGCGT
TTGCGCGTTATCTACCATATGATCACGGTCCCTAAAGAGGCAGGTGGCGC
TGGTATCACTCCGAAACATGGCGAATGGAAATGTGTCGATGCGATCTTTC
CGCTGCATGATGAGGCCATGAATAAGCAGTGCATAAAGGACTGGAGCCAG
AAGACGTTTCTGTCGGCTGATGATTTGGATCAGATACGGAACACGTTCGG
AGAGAATGTAAGGATAAAACCGTCCTTGCAGGCATTACTTGATCTGCCGC
TAATGGGTGCCTCTACGTACAGGTTGGTTTTTACTTCGCATTTCTACAGT
CTTACTTTCGGTTCCTCATCTTCCCCGCCGTATTCGGTTTCTCCTGCTGG
CTGCTGCTCGGTTCCTTTTCCATCATATATGCGGTCGTGAACAGTCTGTG
GTGTATCATTTTCATCGAATACTGGAAGCGCCAAGAGGAGGATTTGAGCT
GTCGCTGGCAAACCAAGGGCGTCTCGGCTGTGCGACCCAAGAGACGCGAA
TTTCAGCCCGAAAGGGAGGTTCAGGATGAAAGCACTGGTGAGGTCAGGGG
GGTGTTCCCCGCGACCAGGCGGATGTATAGACAACTGCTGATTGTCCCGT
TCGCCTTGCTTTCTGCGGTTGCATTGGGTGTCATCATCGCCACGTGCTTT
GCCATTGAGATCTTCATCTCAGAGATATACAATGGCCCGCTGAAGACCTA
CTTGGTAAGTCTAAATCGCGTGAATTTCGAAGAGGCTCTGCTAACAGGAG
CAGGTTTTTATCCCGACCATCCTGCTCTCAGCACTGATCCCAACAATGAG
CTCGGTTTTAGTGTCTATCGCTACGAAGCTCAATGACTACGAGAACTACG
AGACTCAGCCTGCATACGATGTGGCATTGACACAGAAGATCTTTATCATC
AACTTTATCACCTCGTATCTGCCAATCTTCCTCACGGCCTTTGTCTACGT
ACCTTTCGCGAGCCGTATCGTGCCGTACCTTGATGTTTTCCATCTGACTG
TCCGGCCGTTCGTATCGAAGGAGGACGCCAACTCGCGACGAACAGAGTTC
AGCATTGACCCGGACCGTCTGCGCAAGCAGGTGATCTACTTCACTGTCAC
GGCCCAAGCTGTCAACTTTGCCATGGAGACCATTGTACCCATGCTCAAGC
AGCGCCTTTCCCGCGAATATAAGGAATACAACCGCAGAAAGCAGGGAAAG
ATCGAGACCGAGGACGGCTCCGAGGCCAAGAAAGAGGCCCTTTTCGACGA
CCACCCCGACGAGACCAAGTTCCTTACCCGGGTGCGCAACGAAGCCGACA
TGGAGGACTATGACGTGACCGAAGACTTGCGAGAGATGTGTATCCAGTTT
GGATATCTGGCTCTATTCTCTCCTGTCTGGCCCCTAGTCCCCGTCTCATT
CCTGGTCAACAACTGGGTGGAGCTCCGGTCCGATTTCTTCAAGATCTGCA
TGGAGTGCAAGAGACCCTGGCCGCAGCGGGCCGATACCATTGGACCCTGG
CTGGAAAGCCTCGGGTTCCTGTCTTGGGTTGGCAGCATCACCAGCTCTGC
TCTCCTCTATATGTTCAGCAACGGTCATGAAGGCCCGAACGGCGAGCCGA
CTGCCATCCGCGGATGGGCACTACTGCTGACGATATTCTTCTCCGAACAC
ATCTACCTCATGGTGCGGTATGCTATCCGCGCAGCCATGGCCAAGCTGGA
GCCCCCGAACGCCAAGAAGGAGCGGACGGAGCGGTACCTCATGCGCAAGC
GGTACTTGGAGTCGACGATCGCGGCACGCAGCAGTGATGACGAGGGGGAT
GGCAACGAGCAGGATCATTCCATGAAGGTCCCTGATATCACGCGGAAGTC
CTTGGAAGAGGATGCTCGCGAGTGGTCGACTCATGACACTGATCCGGCGG
AACGATTCTGGATGCGACAGAAGGGGTGGAAGGAGTCGGCGCATGTTGGA
GCGACTATCATCAAGACGCTGGCGACTGAACCCCAGGCGAAGAAAGAGCA
ATGATGTGGGCTGGCATGCGTGACTGATGACGAGAGAGGAGAGGAGAATT
TGTCATACTCATGACTGGTCGATGACACGAGCGTAGTATATACATGGGTT
ATGAGTGGGAGCTGGAACTTCTCTATTGTCTATATGTGTCATGAAGTTGA
TCGATGTACTTAATCATTATTCTATTGCTAGTATGTTGCGGTTTGATGTG
TACTTACTAGTACCAGACTGTCTGAATGTCAGTTCAAGTACATACTTGCA
TACATATGCGGGACTCGCCGGAG back to topCoding sequence (CDS) from alignment at ch1:2638219..2641141- >KJC3_001040-T2 ID=KJC3_001040-T2|Name=KJC3_001040-T2|organism=Aspergillus niger KJC3|type=CDS|length=2766bp|location=Sequence derived from alignment at ch1:2638219..2641141- (Aspergillus niger KJC3)
GTTTTTATCCCGACCATCCTGCTCTCAGCACTGATCCCAACAATGAGCTC
GGTTTTAGTGTCTATCGCTACGAAGCTCAATGACTACGAGAACTACGAGA
CTCAGCCTGCATACGATGTGGCATTGACACAGAAGATCTTTATCATCAAC
TTTATCACCTCGTATCTGCCAATCTTCCTCACGGCCTTTGTCTACGTACC
TTTCGCGAGCCGTATCGTGCCGTACCTTGATGTTTTCCATCTGACTGTCC
GGCCGTTCGTATCGAAGGAGGACGCCAACTCGCGACGAACAGAGTTCAGC
ATTGACCCGGACCGTCTGCGCAAGCAGGTGATCTACTTCACTGTCACGGC
CCAAGCTGTCAACTTTGCCATGGAGACCATTGTACCCATGCTCAAGCAGC
GCCTTTCCCGCGAATATAAGGAATACAACCGCAGAAAGCAGGGAAAGATC
GAGACCGAGGACGGCTCCGAGGCCAAGAAAGAGGCCCTTTTCGACGACCA
CCCCGACGAGACCAAGTTCCTTACCCGGGTGCGCAACGAAGCCGACATGG
AGGACTATGACGTGACCGAAGACTTGCGAGAGATGTGTATCCAGTTTGGA
TATCTGGCTCTATTCTCTCCTGTCTGGCCCCTAGTCCCCGTCTCATTCCT
GGTCAACAACTGGGTGGAGCTCCGGTCCGATTTCTTCAAGATCTGCATGG
AGTGCAAGAGACCCTGGCCGCAGCGGGCCGATACCATTGGACCCTGGCTG
GAAAGCCTCGGGTTCCTGTCTTGGGTTGGCAGCATCACCAGCTCTGCTCT
CCTCTATATGTTCAGCAACGGTCATGAAGGCCCGAACGGCGAGCCGACTG
CCATCCGCGGATGGGCACTACTGCTGACGATATTCTTCTCCGAACACATC
TACCTCATGGTGCGGTATGCTATCCGCGCAGCCATGGCCAAGCTGGAGCC
CCCGAACGCCAAGAAGGAGCGGACGGAGCGGTACCTCATGCGCAAGCGGT
ACTTGGAGTCGACGATCGCGGCACGCAGCAGTGATGACGAGGGGGATGGC
AACGAGCAGGATCATTCCATGAAGGTCCCTGATATCACGCGGAAGTCCTT
GGAAGAGGATGCTCGCGAGTGGTCGACTCATGACACTGATCCGGCGGAAC
GATTCTGGATGCGACAGAAGGGGTGGAAGGAGTCGGCGCATGTTGGAGCG
ACTATCATCAAGACGCTGGCGACTGAACCCCAGGCGAAGAAAGAGCAATG
AATGTATAGACAACTGCTGATTGTCCCGTTCGCCTTGCTTTCTGCGGTTG
CATTGGGTGTCATCATCGCCACGTGCTTTGCCATTGAGATCTTCATCTCA
GAGATATACAATGGCCCGCTGAAGACCTACTTGGTTTTTATCCCGACCAT
CCTGCTCTCAGCACTGATCCCAACAATGAGCTCGGTTTTAGTGTCTATCG
CTACGAAGCTCAATGACTACGAGAACTACGAGACTCAGCCTGCATACGAT
GTGGCATTGACACAGAAGATCTTTATCATCAACTTTATCACCTCGTATCT
GCCAATCTTCCTCACGGCCTTTGTCTACGTACCTTTCGCGAGCCGTATCG
TGCCGTACCTTGATGTTTTCCATCTGACTGTCCGGCCGTTCGTATCGAAG
GAGGACGCCAACTCGCGACGAACAGAGTTCAGCATTGACCCGGACCGTCT
GCGCAAGCAGGTGATCTACTTCACTGTCACGGCCCAAGCTGTCAACTTTG
CCATGGAGACCATTGTACCCATGCTCAAGCAGCGCCTTTCCCGCGAATAT
AAGGAATACAACCGCAGAAAGCAGGGAAAGATCGAGACCGAGGACGGCTC
CGAGGCCAAGAAAGAGGCCCTTTTCGACGACCACCCCGACGAGACCAAGT
TCCTTACCCGGGTGCGCAACGAAGCCGACATGGAGGACTATGACGTGACC
GAAGACTTGCGAGAGATGTGTATCCAGTTTGGATATCTGGCTCTATTCTC
TCCTGTCTGGCCCCTAGTCCCCGTCTCATTCCTGGTCAACAACTGGGTGG
AGCTCCGGTCCGATTTCTTCAAGATCTGCATGGAGTGCAAGAGACCCTGG
CCGCAGCGGGCCGATACCATTGGACCCTGGCTGGAAAGCCTCGGGTTCCT
GTCTTGGGTTGGCAGCATCACCAGCTCTGCTCTCCTCTATATGTTCAGCA
ACGGTCATGAAGGCCCGAACGGCGAGCCGACTGCCATCCGCGGATGGGCA
CTACTGCTGACGATATTCTTCTCCGAACACATCTACCTCATGGTGCGGTA
TGCTATCCGCGCAGCCATGGCCAAGCTGGAGCCCCCGAACGCCAAGAAGG
AGCGGACGGAGCGGTACCTCATGCGCAAGCGGTACTTGGAGTCGACGATC
GCGGCACGCAGCAGTGATGACGAGGGGGATGGCAACGAGCAGGATCATTC
CATGAAGGTCCCTGATATCACGCGGAAGTCCTTGGAAGAGGATGCTCGCG
AGTGGTCGACTCATGACACTGATCCGGCGGAACGATTCTGGATGCGACAG
AAGGGGTGGAAGGAGTCGGCGCATGTTGGAGCGACTATCATCAAGACGCT
GGCGACTGAACCCCAGGCGAAGAAAGAGCAATGAATGTATAGACAACTGC
TGATTGTCCCGTTCGCCTTGCTTTCTGCGGTTGCATTGGGTGTCATCATC
GCCACGTGCTTTGCCATTGAGATCTTCATCTCAGAGATATACAATGGCCC
GCTGAAGACCTACTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001040-T2.utr3p1 | KJC3_001040-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001040-T2.utr5p1 | KJC3_001040-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007632 |
| DBxref | PFAM:PF04547 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2638219..2641141 - |
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