You are here

Home

KJC3_001041-T1, KJC3_001041-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001041-T1
Unique NameKJC3_001041-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2641584..2642214-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001041-T1 ID=KJC3_001041-T1|Name=KJC3_001041-T1|organism=Aspergillus niger KJC3|type=mRNA|length=631bp|location=Sequence derived from alignment at ch1:2641584..2642214- (Aspergillus niger KJC3)
ATGTCTGACCAGCCTACTATTCGTCTTGCGACTCCTGAGGGCAAGTGTTT
CTTTCTGATGCCGCTATAGCATTACCTGCGTTGGCCCTATACGCCCATTG
GCAATACCTCCACTCTTAACTAACCATGTCTTGGCTATCATTGCAGATGT
CCCGATCATCCACCAGTTCATCTGCGAGCTCGCTGATTATGAAAAAGCCC
TGCACGAAGTAGAGGCCACTCACGAGTCTCTCCTTGAAACGTTGTCTTTC
CCCGACAGCCCGCCCAAGCGTGGCTCCGTGTACACCGCGCTCATTACCCC
TCCTGCGACGGCCGAGAACCCCACACCCAAACCTGTCGGCATGGCGCTCT
TCTTCTACAACTACTCTACGTGGCGCGCAGCTCCGGGAATCTATCTCGAG
GATCTTTATGTTCAGCCTAGTGCCCGAGGCAATGGCTACGGCTTCAAGTT
GCTCAAGTATCTTGCCGCCAAGGTATTGGAGATCAAGGGCAGACGTCTTG
AGTGGAGTGTCCTGAAGTGGAATGAGCCTAGCATCAAGTTCTATGAGCAG
GTTGGGGCTAAAGCCATGGATGAGTGGACGAAGATGATGATGGAGGGTCC
GGCTTTGAACAAGTTGGCGGAGGGATTGTGA
back to top

Coding sequence (CDS) from alignment at ch1:2641584..2642214-

>KJC3_001041-T1 ID=KJC3_001041-T1|Name=KJC3_001041-T1|organism=Aspergillus niger KJC3|type=CDS|length=1050bp|location=Sequence derived from alignment at ch1:2641584..2642214- (Aspergillus niger KJC3)
ATGTCCCGATCATCCACCAGTTCATCTGCGAGCTCGCTGATTATGAAAAA
GCCCTGCACGAAGTAGAGGCCACTCACGAGTCTCTCCTTGAAACGTTGTC
TTTCCCCGACAGCCCGCCCAAGCGTGGCTCCGTGTACACCGCGCTCATTA
CCCCTCCTGCGACGGCCGAGAACCCCACACCCAAACCTGTCGGCATGGCG
CTCTTCTTCTACAACTACTCTACGTGGCGCGCAGCTCCGGGAATCTATCT
CGAGGATCTTTATGTTCAGCCTAGTGCCCGAGGCAATGGCTACGGCTTCA
AGTTGCTCAAGTATCTTGCCGCCAAGGTATTGGAGATCAAGGGCAGACGT
CTTGAGTGGAGTGTCCTGAAGTGGAATGAGCCTAGCATCAAGTTCTATGA
GCAGGTTGGGGCTAAAGCCATGGATGAGTGGACGAAGATGATGATGGAGG
GTCCGGCTTTGAACAAGTTGGCGGAGGGATTGTGAATGTCTGACCAGCCT
ACTATTCGTCTTGCGACTCCTGAGGATGTCCCGATCATCCACCAGTTCAT
CTGCGAGCTCGCTGATTATGAAAAAGCCCTGCACGAAGTAGAGGCCACTC
ACGAGTCTCTCCTTGAAACGTTGTCTTTCCCCGACAGCCCGCCCAAGCGT
GGCTCCGTGTACACCGCGCTCATTACCCCTCCTGCGACGGCCGAGAACCC
CACACCCAAACCTGTCGGCATGGCGCTCTTCTTCTACAACTACTCTACGT
GGCGCGCAGCTCCGGGAATCTATCTCGAGGATCTTTATGTTCAGCCTAGT
GCCCGAGGCAATGGCTACGGCTTCAAGTTGCTCAAGTATCTTGCCGCCAA
GGTATTGGAGATCAAGGGCAGACGTCTTGAGTGGAGTGTCCTGAAGTGGA
ATGAGCCTAGCATCAAGTTCTATGAGCAGGTTGGGGCTAAAGCCATGGAT
GAGTGGACGAAGATGATGATGGAGGGTCCGGCTTTGAACAAGTTGGCGGA
GGGATTGTGAATGTCTGACCAGCCTACTATTCGTCTTGCGACTCCTGAGG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008080N-acetyltransferase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001041KJC3_001041Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001041-T1KJC3_001041-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001041-T1.cdsKJC3_001041-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001041-T1.exon2KJC3_001041-T1.exon2Aspergillus niger KJC3exon
KJC3_001041-T1.exon1KJC3_001041-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR016181
DBxrefInterPro:IPR000182
DBxrefPFAM:PF08445
DBxrefPFAM:PF13508
DBxrefPFAM:PF13673
DBxrefPFAM:PF00583
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2641584..2642214 -
Powered by Drupal