|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2647550..2652876+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001043-T1 ID=KJC3_001043-T1|Name=KJC3_001043-T1|organism=Aspergillus niger KJC3|type=mRNA|length=5327bp|location=Sequence derived from alignment at ch1:2647550..2652876+ (Aspergillus niger KJC3)
CCCGGGTCTCCGCACCCAAAGAAGCCGCCTTTATGAGCTCCTGCGTCGCG
ACAACCAGCCACAAGCATCCCTGGGTGCACGTTCTCCCCTGCGTGGATGA
TGCTGGCTACGAGCTTGCCTAGGTACTGTCTGCCCACCATCTCGTTGCAT
CCAGCCGTGACGCCTGAGTGTGGGCGTGGATGTGACTGAAAACGAGTGCG
AAAAAGAGAAGAACAAGGACGAGAGTGTTCCAAATTGGGGCGCGGTGCTG
CCTTGATTTCCTTGGAATTCCTAGTAGGCGTGTTTTAGCGTCTGGTCCCC
ATCGAGCTCATGGAAGCCCAGGGAATCATGGCCACCGGTGACGGAATCAT
CGCTGCACCACCCTCGCTTGAATCTTCAAGCCTGGACCCTCTCCATGTGT
TGCCTGCATCCTCATCGACCGCCGCACGATCCCTCGCAACCTCAATCCCC
GCCTTAACCGCCAGTTTCTCCGTGGTGTCCGGCTTCTCTTCGCATCTCCC
TCCCCCGCCAGTAACCCCCCCAGCACCTTCAACCATGGTGGGGTGGATCG
GCTGGATCTTTTCCTTCATCTTCCAGGTCATTCCAAGTGTTCTATACTGG
ATTGTTACCTTCACGACCATCACCTTGCCCACATGGCTGTTTACGCTCTT
TTCTATGAGCCTTACCTTCACCATGAACTTCACGACCTTGTGAGTGACGC
ACCCTGATGTCCCATGCATGTATTCTATTGTCATTGGCAATTGCGGGTGA
ATCTCTAGTGCCAACAACATGCTGACCATGATGGTTTCTATCGATAGACT
CTTGATCGCGCTGGCCGTGGTCTCGACCATCAGTTGGTTTATCCGCTATC
GTTTCCTGAACATGTACAGTCGTCTGCCTCCAGAACCGCAGCGCAAGGAA
CCCCAGCTCGATCTCTTCCCCGATGTACCGGACAGCGACACGAAACCGGG
CTTGGCAAACTATCTGGATGAGTTTCTGAGCGCTATCAAAGTCTTCGGCT
ACCTCGAGCGGCCTGTATTCCACGAATTGACCCGCACCATGCAGACAAGG
AAGTTGATCGCGGGCGAAACGCTCCTGCTGGAGGAAGAGAAAGGGTTTTG
TTTGGTCGTTGATGGCTTGGTCCAAATCTTCGTGAAGTCCATGCGGGACA
GAAAGTCGGGCTCAGATGAAGAGCTGAACCGCATGGCAGGTGAATCTTCC
GACGAAGACGACCATCGACCGGACGGAAGGCAAGGATACCAGCTGCTTAC
CGAAGTAAAGAATGGAGCTTCGATGTCCTCGCTCTTTTCCATCCTGTCGC
TGTTTACTGAGGATGTCCAATTACGATATGCAGACAGCTCAGCTTCCAGC
GCTTCTAGTATAGGTCCGGGTCTTGCCATTGGCCCCGACTCATTTCCGGC
GAGCCCTCGGGAAATGGACGACTCTCCGCATGTTTATCAAGGGGATCGTC
TTGACCCGGCCTCTCACAGGAACAGCACTCCCGAAGACCTACCAGCTGTG
CCGCCATTAAATCTGGGTGAAAGCCAAGTTCCACCCGCCCACTCTGCTCG
CTCTGAAAGCAGGAAATACTCAGGCAAAACGCGTAGGAAATCAGTGCATC
CAGATATCGTTGCACGAGCGATGGTAGACACAACAATCGCAATCATCCCT
GCAAGCGCATTCCGTCGCTTGACCCGAGTGTACCCAAAAGCGACTGCCCA
TATCGTCCAGGTAATCCTTACGCGCCTACAGAGAGTCACCTTCGCTACAG
CGCACTCCTATCTGGGTCTAAACAATGAGGTGCTGGGAATAGAGAAGCAG
ATGACGAAATTCACAACGTACGATTTGCCAAATGAGCTGCGTGGGTCAGC
GCTGGACCGTCTCAAAGACAAATTTATCAAAGAACGAGATCGCCTAGGCC
AAGAGGAAGTAACGAAAGGGATTGCGTTGCATAACCCATATGGAGGACGG
AGGCCCCGGTCGAGTAGCTTTCGAAGGAAGGAAGCCGCTCTCCAGGCGAA
GATGGTCGCCTCTAAACGGCCAGTCTCCATGGTTGCCCAGGATAGCGCAC
TAAGTGATCGCGAGAATTCCGGTGTGAGTCCCGGGGATCTTCTATCTACC
ATTCAGCTTTCGCGCTTCGGTCCGAGATACGAGCACCTTGCCCCCCGGTT
ACTGAGTCCTCTTACGGAGAAAGAACACTCCCCCTTACGGTCCCCGTCTC
CAATGATTCCAGGACGCGCATCTCCTTTTCACCGGAAAGAGTCTTTGGAT
GAGGATGCACTCTTCCGTGAATCAATCCTGGAGTGTATCATGAAAGGCAT
CGGCTTGACTGGAAGCACCAATGACTTCTTGCGTAAAAGTAGTCACCCTT
CAGGCGATGTTTCCCCGAAGCTCCTCTCCTATGATTCTCGCCGCCAGAAA
GCCGTCTTTAGCAACAACGCGTTTGGGTTCATTGATCCCTACGAAGGTTC
TGCGGATGGTGAAAGCGAATCCATGATGTCCATGTCTGTCACCAGTGCCG
GTGGCACCTCGCCTATTGTCAACTTGAGGGAAGAACTGCGAAATGACATT
GAAATTGTCTATTTCCCTCAGGGATCGGTTCTTGTTGAGCAAGGCGAGCG
CCATCCGGGTTTGTACTACGTTGTTGATGGCTTCCTGGATGTTGGTATTC
CTGTGGACGACAAAGAAGAAGACCTTGTGGGATCGTCCAGACCGGCACAT
GAGGAACTGTTCCCTATGTTAAGACGCACCAACACGAGTTCCTCTCGTGT
GTCAGGCTCGGCAGCGGCAGCAAACGATCCTAGGCGGAAGAAGCAGTCGC
GGAGGTCACTCTATCTTATTAAACCCGGTGGGATCCAAGGCTATGTGGGC
GCCGTCGCATCTTACCGCTCGTATACCGATGTCGTTGCGAAGACAGACGT
ATACGTAGGATTTCTTCCGCGGGCGTCATTGGAAAGAATAGCGGAGCGGT
ACCCTCTGGCCCTGTTGACTTTGGCAAAGCGGCTGACAAGCCTGCTCCCA
CGGTTACTTCTTCATATCGACTTCGCCCTGGAATGGGTTCAAGTAAGTGC
TGGCCAGGTGATCTATCACCAGGGTGACGAGAGCGATGCAATCTACCTTG
CCTTGAATGGACGTTTGCGGTCTGTACATGAAGGTCCAAATGGCAAGATG
ACCGTTGTCGGTGAATACGGCCAGGGAGAAAGCGTGGGTGAGTTGGAAGT
GATGACTGAATCGACCCGGCCGGCGACTCTCCATGCCATCCGCGACACTG
AACTCGCCAAATTTCCCCGGACTCTCTTCAACAGCCTCGCCCAGGAACAT
CCGGGAATCACTATTCAGGTCTCCAAACTCATTGCACAACGGATGCGGGA
CCTTGTCGAGACTCCGCTGGCCGAGAAGGGAGGTGAACCTGGTGTTTCTG
GTACGGTGAAGACAGCAAAGTCGACTCTCAACCTTCGTACTGTTGGCATA
CTTCCCGTAACAGCTGGAGTTCCCGTTGTTGAATTTGGAAACCGGCTGTT
ACAGGCGCTTCACCAGATTGGGGTCACCAACGGCGCCACGTCTCTTAACC
AAGCGGCTATTCTGAACCATCTAGGAAGACATGCCTTCAGTAAGATGGGC
AAACTCAAGTTATCACAGTACCTGGCGGATCTGGAGGAGAAGTACGGCAT
GGTCCTCTACATTGCGGATACGACCGTGAACTCTCCGTGGACGCAAACAT
GTATTACTCAAGCTGACTGTATCTTGCTGGTTGGTCTTGCCGAGTCGACG
CCCAGCATCGGTGAATACGAGAGATTTCTCCTTGGGATGAAAACAACCGC
TCGGAAAGAATTAGTCCTGTTGCATGGGGAACGGTACTGCCCTCCGGGAC
TGACCCGCCAGTGGTTGAAGAATCGTGTCTGGATCAATGGAGGCCATCAT
CATGTACAGATGGCCTTCCGACTGACGGCCGAACCCTCTCATCCCCAGAC
CAAACGCTTTGGAACCGTCTTGAAGCAGAGAGTTCAGGTTATTCAGGCTG
AAATCCAGAAGTATACCTCGCGCCGTATCCGCCAGTCACCGCTATACTCT
GCACAGACACCATTCAAGGGTGACTTCCATCGCTTGGCGCGTCGGCTCTG
TGGCCGGTCGGTGGGGCTTGTGCTTGGTGGTGGAGGTGCCAGAGGTATTG
CCCAGGTCGGGGTAATCAAAGCTCTAGAAGAAGCAGGCATCCCCATTGAT
ATCATTGGCGGCACTTCGATTGGTTCTTTCATTGGAGCTCTGTATGCACG
GGATGCTGACGTTGTACCCATGTATGGTCGTGCAAAGAAGTTTGCGGGCC
GCATGGGAAGCATCTGGCGATTCGCCCTGGACCTGACCTACCCTACTGTT
TCCTATACCACTGGGCATGAATTCAACCGTGGCATCTTCAAGACGTTTGG
GGATAGTCAGATTGAAGACTTCTGGCTCGAGTTCTACTGCAACACCACCA
ACATTAGCCGATCGCGTGCCGAATATCACTCTTCTGGCTACACGTGGCGG
TACGTACGTGCATCCATGTCATTAGCTGGCTTGATCCCGCCGATCTGCGA
CGAAGGTAGCATGCTGCTTGATGGCGGCTACATTGACAATCTTACGGTCG
ACCATATGAAAGGGCTGGGGGCGGATGTGATTTTTGCGGTGGACGTGGGA
TCGATTGATGACAACACCCCGCAAGTGTATGGCGACTCCCTGTCCGGGTT
CTGGGCAGTGGTGAACCGCTGGAATCCGTTCAGCTCGTGTCCTAACCCAC
CAACGCTGTCTGAGATTCAAGCACGCCTGGCGTATGTGTCGTCGATCGAG
AACCTCGAACGTGCCAAAAATACCCCTGGGTGCCTGTACATGCGCCCGCC
CATTGATCCATACGGGACGCTGGACTTTGCGAAGTTTGACGAGATCTACC
AACTGGGCTATGCGTATGGTAAGAATTACTTGGAAAAGCTGAAGCGGGAG
GGATCACTTCCGCTTCCCGAAGAGACCGAGGAGAAGAAGAAGCTCCAGCG
GACGCTGGCGCCCCGTCGCGCGAGTATCTAATGTTTCTGTCCAGCATATG
ATGCTATTCATATGACTGCGACCGAGCCGGCAGGGTGGGATAGTTCTGTT
TTCCATGTGTTACTCTTTTCCTCCCGGACTTTCAGCGGTGATCTTCTGCT
CTATACCCGAGACTATCTCCCTTTGCTATGCTTTTGGTTGCATTCATCTG
GCATGTACATGTCTCTAGTCCAATCCCGATAGACATGAGTTGTAGATAGA
ACCACATAGACGTGTAACCGAGCCAAATTCATTTATTTCCCGCGCTCGTC
CCCATCGACAATCTAAATAGTTGGCCC back to topCoding sequence (CDS) from alignment at ch1:2647550..2652876+ >KJC3_001043-T1 ID=KJC3_001043-T1|Name=KJC3_001043-T1|organism=Aspergillus niger KJC3|type=CDS|length=4263bp|location=Sequence derived from alignment at ch1:2647550..2652876+ (Aspergillus niger KJC3)
ATGCTGACCATGATGGTTTCTATCGATAGACTCTTGATCGCGCTGGCCGT
GGTCTCGACCATCAGTTGGTTTATCCGCTATCGTTTCCTGAACATGTACA
GTCGTCTGCCTCCAGAACCGCAGCGCAAGGAACCCCAGCTCGATCTCTTC
CCCGATGTACCGGACAGCGACACGAAACCGGGCTTGGCAAACTATCTGGA
TGAGTTTCTGAGCGCTATCAAAGTCTTCGGCTACCTCGAGCGGCCTGTAT
TCCACGAATTGACCCGCACCATGCAGACAAGGAAGTTGATCGCGGGCGAA
ACGCTCCTGCTGGAGGAAGAGAAAGGGTTTTGTTTGGTCGTTGATGGCTT
GGTCCAAATCTTCGTGAAGTCCATGCGGGACAGAAAGTCGGGCTCAGATG
AAGAGCTGAACCGCATGGCAGGTGAATCTTCCGACGAAGACGACCATCGA
CCGGACGGAAGGCAAGGATACCAGCTGCTTACCGAAGTAAAGAATGGAGC
TTCGATGTCCTCGCTCTTTTCCATCCTGTCGCTGTTTACTGAGGATGTCC
AATTACGATATGCAGACAGCTCAGCTTCCAGCGCTTCTAGTATAGGTCCG
GGTCTTGCCATTGGCCCCGACTCATTTCCGGCGAGCCCTCGGGAAATGGA
CGACTCTCCGCATGTTTATCAAGGGGATCGTCTTGACCCGGCCTCTCACA
GGAACAGCACTCCCGAAGACCTACCAGCTGTGCCGCCATTAAATCTGGGT
GAAAGCCAAGTTCCACCCGCCCACTCTGCTCGCTCTGAAAGCAGGAAATA
CTCAGGCAAAACGCGTAGGAAATCAGTGCATCCAGATATCGTTGCACGAG
CGATGGTAGACACAACAATCGCAATCATCCCTGCAAGCGCATTCCGTCGC
TTGACCCGAGTGTACCCAAAAGCGACTGCCCATATCGTCCAGGTAATCCT
TACGCGCCTACAGAGAGTCACCTTCGCTACAGCGCACTCCTATCTGGGTC
TAAACAATGAGGTGCTGGGAATAGAGAAGCAGATGACGAAATTCACAACG
TACGATTTGCCAAATGAGCTGCGTGGGTCAGCGCTGGACCGTCTCAAAGA
CAAATTTATCAAAGAACGAGATCGCCTAGGCCAAGAGGAAGTAACGAAAG
GGATTGCGTTGCATAACCCATATGGAGGACGGAGGCCCCGGTCGAGTAGC
TTTCGAAGGAAGGAAGCCGCTCTCCAGGCGAAGATGGTCGCCTCTAAACG
GCCAGTCTCCATGGTTGCCCAGGATAGCGCACTAAGTGATCGCGAGAATT
CCGGTGTGAGTCCCGGGGATCTTCTATCTACCATTCAGCTTTCGCGCTTC
GGTCCGAGATACGAGCACCTTGCCCCCCGGTTACTGAGTCCTCTTACGGA
GAAAGAACACTCCCCCTTACGGTCCCCGTCTCCAATGATTCCAGGACGCG
CATCTCCTTTTCACCGGAAAGAGTCTTTGGATGAGGATGCACTCTTCCGT
GAATCAATCCTGGAGTGTATCATGAAAGGCATCGGCTTGACTGGAAGCAC
CAATGACTTCTTGCGTAAAAGTAGTCACCCTTCAGGCGATGTTTCCCCGA
AGCTCCTCTCCTATGATTCTCGCCGCCAGAAAGCCGTCTTTAGCAACAAC
GCGTTTGGGTTCATTGATCCCTACGAAGGTTCTGCGGATGGTGAAAGCGA
ATCCATGATGTCCATGTCTGTCACCAGTGCCGGTGGCACCTCGCCTATTG
TCAACTTGAGGGAAGAACTGCGAAATGACATTGAAATTGTCTATTTCCCT
CAGGGATCGGTTCTTGTTGAGCAAGGCGAGCGCCATCCGGGTTTGTACTA
CGTTGTTGATGGCTTCCTGGATGTTGGTATTCCTGTGGACGACAAAGAAG
AAGACCTTGTGGGATCGTCCAGACCGGCACATGAGGAACTGTTCCCTATG
TTAAGACGCACCAACACGAGTTCCTCTCGTGTGTCAGGCTCGGCAGCGGC
AGCAAACGATCCTAGGCGGAAGAAGCAGTCGCGGAGGTCACTCTATCTTA
TTAAACCCGGTGGGATCCAAGGCTATGTGGGCGCCGTCGCATCTTACCGC
TCGTATACCGATGTCGTTGCGAAGACAGACGTATACGTAGGATTTCTTCC
GCGGGCGTCATTGGAAAGAATAGCGGAGCGGTACCCTCTGGCCCTGTTGA
CTTTGGCAAAGCGGCTGACAAGCCTGCTCCCACGGTTACTTCTTCATATC
GACTTCGCCCTGGAATGGGTTCAAGTAAGTGCTGGCCAGGTGATCTATCA
CCAGGGTGACGAGAGCGATGCAATCTACCTTGCCTTGAATGGACGTTTGC
GGTCTGTACATGAAGGTCCAAATGGCAAGATGACCGTTGTCGGTGAATAC
GGCCAGGGAGAAAGCGTGGGTGAGTTGGAAGTGATGACTGAATCGACCCG
GCCGGCGACTCTCCATGCCATCCGCGACACTGAACTCGCCAAATTTCCCC
GGACTCTCTTCAACAGCCTCGCCCAGGAACATCCGGGAATCACTATTCAG
GTCTCCAAACTCATTGCACAACGGATGCGGGACCTTGTCGAGACTCCGCT
GGCCGAGAAGGGAGGTGAACCTGGTGTTTCTGGTACGGTGAAGACAGCAA
AGTCGACTCTCAACCTTCGTACTGTTGGCATACTTCCCGTAACAGCTGGA
GTTCCCGTTGTTGAATTTGGAAACCGGCTGTTACAGGCGCTTCACCAGAT
TGGGGTCACCAACGGCGCCACGTCTCTTAACCAAGCGGCTATTCTGAACC
ATCTAGGAAGACATGCCTTCAGTAAGATGGGCAAACTCAAGTTATCACAG
TACCTGGCGGATCTGGAGGAGAAGTACGGCATGGTCCTCTACATTGCGGA
TACGACCGTGAACTCTCCGTGGACGCAAACATGTATTACTCAAGCTGACT
GTATCTTGCTGGTTGGTCTTGCCGAGTCGACGCCCAGCATCGGTGAATAC
GAGAGATTTCTCCTTGGGATGAAAACAACCGCTCGGAAAGAATTAGTCCT
GTTGCATGGGGAACGGTACTGCCCTCCGGGACTGACCCGCCAGTGGTTGA
AGAATCGTGTCTGGATCAATGGAGGCCATCATCATGTACAGATGGCCTTC
CGACTGACGGCCGAACCCTCTCATCCCCAGACCAAACGCTTTGGAACCGT
CTTGAAGCAGAGAGTTCAGGTTATTCAGGCTGAAATCCAGAAGTATACCT
CGCGCCGTATCCGCCAGTCACCGCTATACTCTGCACAGACACCATTCAAG
GGTGACTTCCATCGCTTGGCGCGTCGGCTCTGTGGCCGGTCGGTGGGGCT
TGTGCTTGGTGGTGGAGGTGCCAGAGGTATTGCCCAGGTCGGGGTAATCA
AAGCTCTAGAAGAAGCAGGCATCCCCATTGATATCATTGGCGGCACTTCG
ATTGGTTCTTTCATTGGAGCTCTGTATGCACGGGATGCTGACGTTGTACC
CATGTATGGTCGTGCAAAGAAGTTTGCGGGCCGCATGGGAAGCATCTGGC
GATTCGCCCTGGACCTGACCTACCCTACTGTTTCCTATACCACTGGGCAT
GAATTCAACCGTGGCATCTTCAAGACGTTTGGGGATAGTCAGATTGAAGA
CTTCTGGCTCGAGTTCTACTGCAACACCACCAACATTAGCCGATCGCGTG
CCGAATATCACTCTTCTGGCTACACGTGGCGGTACGTACGTGCATCCATG
TCATTAGCTGGCTTGATCCCGCCGATCTGCGACGAAGGTAGCATGCTGCT
TGATGGCGGCTACATTGACAATCTTACGGTCGACCATATGAAAGGGCTGG
GGGCGGATGTGATTTTTGCGGTGGACGTGGGATCGATTGATGACAACACC
CCGCAAGTGTATGGCGACTCCCTGTCCGGGTTCTGGGCAGTGGTGAACCG
CTGGAATCCGTTCAGCTCGTGTCCTAACCCACCAACGCTGTCTGAGATTC
AAGCACGCCTGGCGTATGTGTCGTCGATCGAGAACCTCGAACGTGCCAAA
AATACCCCTGGGTGCCTGTACATGCGCCCGCCCATTGATCCATACGGGAC
GCTGGACTTTGCGAAGTTTGACGAGATCTACCAACTGGGCTATGCGTATG
GTAAGAATTACTTGGAAAAGCTGAAGCGGGAGGGATCACTTCCGCTTCCC
GAAGAGACCGAGGAGAAGAAGAAGCTCCAGCGGACGCTGGCGCCCCGTCG
CGCGAGTATCTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006629 | lipid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001043-T1.utr5p1 | KJC3_001043-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001043-T1.utr3p1 | KJC3_001043-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092603EH |
| DBxref | InterPro:IPR016035 |
| DBxref | InterPro:IPR018490 |
| DBxref | InterPro:IPR014710 |
| DBxref | InterPro:IPR002641 |
| DBxref | InterPro:IPR000595 |
| DBxref | PFAM:PF00027 |
| Product | phosphatidylcholine and lysophosphatidylcholine phospholipase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2647550..2652876 + |
|
