|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2653628..2654682+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001044-T1 ID=KJC3_001044-T1|Name=KJC3_001044-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1055bp|location=Sequence derived from alignment at ch1:2653628..2654682+ (Aspergillus niger KJC3)
ATGGTCCAATCGCTGGGTCTGCCCATGTGCTCGAGAAGCCTGTATACATG
GTGCTTCACCCTGTTTTGCTTGGGGCTCCTGGCTCTACTGTACGTCAGGC
TATTGAGGGATGATCTCATCTTAGTTCTCGGTGCGTTTCCACCTCTAAGC
TCATCGATTTAATTAGCTAGGGTCCCTAACGCTATGCAGGTCGAGTCGAG
AAACATCCGGCTAGGCGCAAACATAACGCACTGGTTCTGGCGAAGACTAG
CTCTGAAGATGTCACCTGGGCTTATGCTCTCAAACCCCAGTAAGTGTTCT
AGACTCCAGTTCGATCCGATCGAAATACCATCACGACATGCTCACGAGTT
AGATAGTTGGAAACCTTACATCTACACCTCCGACAAAGAGCCTGGATACC
GCCCTATCCCGGCGAACAAGGCCCGCGAAGGCATGGCATACCTGACGCAC
ATCATTGAACACTACGACTACCTTGCGGATGTTACGGCCTTCATGCATGC
CTCTGCCACTCAGTGGCACAACGATGTCGGCGACACGGCTTCGTCCTCTC
TGCTTCAAAAACTCAGCCTGGACGCCGTGAATAAGGCTGGGTATGCGAAT
CTCCGCTGTGAGCACCGTCCAGGATGTCCCGTAGCCGTGCGCCCCTTTGA
TCCAGCCATGGAGTCGAACCATAACGTGGTGTATCGCAACTTCACCTCAA
TCTACATGGATATGTTCTCCGTGCCGCGGGAGCAGGTCCCTACCGAGATC
GGTGGGGTCTGCTGTGGTCAGTTTGTGCTCACAAGGGACCGGATCCGGGA
GCGGCCACGAGATGACTATGTGCGAATGCGCGACTGGGCTCTAGCGACCG
ATATGGATACTTTTGCAGCGGGGTCGGTCTTCGAGATGCTCTGGCATATC
ATCTTTCTTGAGCAGCCAGTGTCGTATGTTTTGCCCAATCCTAAACGCCG
CAAATTTTTGAGAAAAAGCTGACTCGACATATTAGATGCCCCGATGTCCA
ACAGTGTTATTGTGAGCTTTATAATATTTGCCCAGAGATCGATTCTGGCT
CTTGA back to topCoding sequence (CDS) from alignment at ch1:2653628..2654682+ >KJC3_001044-T1 ID=KJC3_001044-T1|Name=KJC3_001044-T1|organism=Aspergillus niger KJC3|type=CDS|length=3468bp|location=Sequence derived from alignment at ch1:2653628..2654682+ (Aspergillus niger KJC3)
ATGGTCCAATCGCTGGGTCTGCCCATGTGCTCGAGAAGCCTGTATACATG
GTGCTTCACCCTGTTTTGCTTGGGGCTCCTGGCTCTACTGTACGTCAGGC
TATTGAGGGATGATCTCATCTTAGTTCTCGGTCGAGTCGAGAAACATCCG
GCTAGGCGCAAACATAACGCACTGGTTCTGGCGAAGACTAGCTCTGAAGA
TGTCACCTGGGCTTATGCTCTCAAACCCCATTGGAAACCTTACATCTACA
CCTCCGACAAAGAGCCTGGATACCGCCCTATCCCGGCGAACAAGGCCCGC
GAAGGCATGGCATACCTGACGCACATCATTGAACACTACGACTACCTTGC
GGATGTTACGGCCTTCATGCATGCCTCTGCCACTCAGTGGCACAACGATG
TCGGCGACACGGCTTCGTCCTCTCTGCTTCAAAAACTCAGCCTGGACGCC
GTGAATAAGGCTGGGTATGCGAATCTCCGCTGTGAGCACCGTCCAGGATG
TCCCGTAGCCGTGCGCCCCTTTGATCCAGCCATGGAGTCGAACCATAACG
TGGTGTATCGCAACTTCACCTCAATCTACATGGATATGTTCTCCGTGCCG
CGGGAGCAGGTCCCTACCGAGATCGGTGGGGTCTGCTGTGGTCAGTTTGT
GCTCACAAGGGACCGGATCCGGGAGCGGCCACGAGATGACTATGTGCGAA
TGCGCGACTGGGCTCTAGCGACCGATATGGATACTTTTGCAGCGGGGTCG
GTCTTCGAGATGCTCTGGCATATCATCTTTCTTGAGCAGCCAGTGTCATG
CCCCGATGTCCAACAGTGTTATTGTGAGCTTTATAATATTTGCCCAGAGA
TCGATTCTGGCTCTTGAATGGTCCAATCGCTGGGTCTGCCCATGTGCTCG
AGAAGCCTGTATACATGGTGCTTCACCCTGTTTTGCTTGGGGCTCCTGGC
TCTACTGTACGTCAGGCTATTGAGGGATGATCTCATCTTAGTTCTCGGTC
GAGTCGAGAAACATCCGGCTAGGCGCAAACATAACGCACTGGTTCTGGCG
AAGACTAGCTCTGAAGATGTCACCTGGGCTTATGCTCTCAAACCCCATTG
GAAACCTTACATCTACACCTCCGACAAAGAGCCTGGATACCGCCCTATCC
CGGCGAACAAGGCCCGCGAAGGCATGGCATACCTGACGCACATCATTGAA
CACTACGACTACCTTGCGGATGTTACGGCCTTCATGCATGCCTCTGCCAC
TCAGTGGCACAACGATGTCGGCGACACGGCTTCGTCCTCTCTGCTTCAAA
AACTCAGCCTGGACGCCGTGAATAAGGCTGGGTATGCGAATCTCCGCTGT
GAGCACCGTCCAGGATGTCCCGTAGCCGTGCGCCCCTTTGATCCAGCCAT
GGAGTCGAACCATAACGTGGTGTATCGCAACTTCACCTCAATCTACATGG
ATATGTTCTCCGTGCCGCGGGAGCAGGTCCCTACCGAGATCGGTGGGGTC
TGCTGTGGTCAGTTTGTGCTCACAAGGGACCGGATCCGGGAGCGGCCACG
AGATGACTATGTGCGAATGCGCGACTGGGCTCTAGCGACCGATATGGATA
CTTTTGCAGCGGGGTCGGTCTTCGAGATGCTCTGGCATATCATCTTTCTT
GAGCAGCCAGTGTCATGCCCCGATGTCCAACAGTGTTATTGTGAGCTTTA
TAATATTTGCCCAGAGATCGATTCTGGCTCTTGAATGGTCCAATCGCTGG
GTCTGCCCATGTGCTCGAGAAGCCTGTATACATGGTGCTTCACCCTGTTT
TGCTTGGGGCTCCTGGCTCTACTGTACGTCAGGCTATTGAGGGATGATCT
CATCTTAGTTCTCGGTCGAGTCGAGAAACATCCGGCTAGGCGCAAACATA
ACGCACTGGTTCTGGCGAAGACTAGCTCTGAAGATGTCACCTGGGCTTAT
GCTCTCAAACCCCATTGGAAACCTTACATCTACACCTCCGACAAAGAGCC
TGGATACCGCCCTATCCCGGCGAACAAGGCCCGCGAAGGCATGGCATACC
TGACGCACATCATTGAACACTACGACTACCTTGCGGATGTTACGGCCTTC
ATGCATGCCTCTGCCACTCAGTGGCACAACGATGTCGGCGACACGGCTTC
GTCCTCTCTGCTTCAAAAACTCAGCCTGGACGCCGTGAATAAGGCTGGGT
ATGCGAATCTCCGCTGTGAGCACCGTCCAGGATGTCCCGTAGCCGTGCGC
CCCTTTGATCCAGCCATGGAGTCGAACCATAACGTGGTGTATCGCAACTT
CACCTCAATCTACATGGATATGTTCTCCGTGCCGCGGGAGCAGGTCCCTA
CCGAGATCGGTGGGGTCTGCTGTGGTCAGTTTGTGCTCACAAGGGACCGG
ATCCGGGAGCGGCCACGAGATGACTATGTGCGAATGCGCGACTGGGCTCT
AGCGACCGATATGGATACTTTTGCAGCGGGGTCGGTCTTCGAGATGCTCT
GGCATATCATCTTTCTTGAGCAGCCAGTGTCATGCCCCGATGTCCAACAG
TGTTATTGTGAGCTTTATAATATTTGCCCAGAGATCGATTCTGGCTCTTG
AATGGTCCAATCGCTGGGTCTGCCCATGTGCTCGAGAAGCCTGTATACAT
GGTGCTTCACCCTGTTTTGCTTGGGGCTCCTGGCTCTACTGTACGTCAGG
CTATTGAGGGATGATCTCATCTTAGTTCTCGGTCGAGTCGAGAAACATCC
GGCTAGGCGCAAACATAACGCACTGGTTCTGGCGAAGACTAGCTCTGAAG
ATGTCACCTGGGCTTATGCTCTCAAACCCCATTGGAAACCTTACATCTAC
ACCTCCGACAAAGAGCCTGGATACCGCCCTATCCCGGCGAACAAGGCCCG
CGAAGGCATGGCATACCTGACGCACATCATTGAACACTACGACTACCTTG
CGGATGTTACGGCCTTCATGCATGCCTCTGCCACTCAGTGGCACAACGAT
GTCGGCGACACGGCTTCGTCCTCTCTGCTTCAAAAACTCAGCCTGGACGC
CGTGAATAAGGCTGGGTATGCGAATCTCCGCTGTGAGCACCGTCCAGGAT
GTCCCGTAGCCGTGCGCCCCTTTGATCCAGCCATGGAGTCGAACCATAAC
GTGGTGTATCGCAACTTCACCTCAATCTACATGGATATGTTCTCCGTGCC
GCGGGAGCAGGTCCCTACCGAGATCGGTGGGGTCTGCTGTGGTCAGTTTG
TGCTCACAAGGGACCGGATCCGGGAGCGGCCACGAGATGACTATGTGCGA
ATGCGCGACTGGGCTCTAGCGACCGATATGGATACTTTTGCAGCGGGGTC
GGTCTTCGAGATGCTCTGGCATATCATCTTTCTTGAGCAGCCAGTGTCAT
GCCCCGATGTCCAACAGTGTTATTGTGAGCTTTATAATATTTGCCCAGAG
ATCGATTCTGGCTCTTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021838 |
| DBxref | PFAM:PF11913 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2653628..2654682 + |
|
