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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2665818..2667505- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001048-T1 ID=KJC3_001048-T1|Name=KJC3_001048-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1688bp|location=Sequence derived from alignment at ch1:2665818..2667505- (Aspergillus niger KJC3)
TGATTACTCTAGCAAATGCAACTTCCAGCGTTCCCATATTATAGCCTCGT
TCCGAGCTCCTCTCCCCCTTCCCCCCTTCTCCCCTAATTACCACCACCAG
ACAATGCTCCCTATCCCTCCGACAAGAGTCGCCAAACAATTCTTCACACA
TCTCCCGTATTATCTCCAACTACGCGCATCGAAGATCCTCATTTCTAGCT
TTTTCGTCTGGCTTTTAATATTCTACTATTGCCGAGTCACCCTCTGGCGT
GATCCACACTCTGCCTATTTCCAAGACCGCCATGTCTACGAGCTGGATTA
CAGTCTCCACCGCGAACGTGAGGCCTGGCATTTTATCTCACAGCATAATT
CGGGCATAGATCCACCAGATTATGTGAAGAGTGGAAGCACACCATCTGTT
TGTATAGCCATGGTCACTGTTCGACGAGACTCGGACCATTATTTTGAGGC
ATCTGTTGGCTCGCTGTTGGAGGGCCTGGATGAAAGGGAGCGACAAGCGT
TGTATCTCAGTATTCTCTTTGCAGATACAGATCCGAGAGTACATCCCAGT
TGGGATCAGAAATGGGTGGGCAGGCTCGTGGACTCAGCGGATAGTTATAA
CGTGACAGAAGGACAACTTCAGCATTTGCAGGACCTGGAGAAAGAGAAGA
ATTTCTATGAGAAGGGAGTCTTGTGAGTCCGTTTTTCCCAAGTCCTTGAT
TCATTACCATCTGCTTCCAGGACCGAGCCAGCTAATAGTCTGTAGCGATT
ATATATACGCCCTACGAGCCTGTCAGGAAGTAAACGCCCCCTACACCATC
ATTTTCGAAGACGACATCATCGTTGCCACAGGGTGGTTCTCGAAGACTCT
GAAGGCGCTCTCCGATATTTCACAACGGAATCAACAGCCAAGGAATTCCT
GGATCTATCTCCGTCTTTTCTACACCGAGACCTCATTGGGCTGGAGCGAT
TCCGACATGGCATACACAAACATGACCCTGATATTTGGCCTTCTCATGCT
GTCTACATTCTCATCCTTATCAATGCTTCGGCACACTCGGTTCCAACGGC
TGCACCTTGACACCCTGAGCATCGTGGTTATTTCTATGATATGCGTTCCA
GCCTTCACCGCACTCGTATACATGGCCGGAAAATACAACGTAATGCCGCT
CCATGGTGTTGTCGAGATGAACCAGTATGGATGTTGCACCCAGGGCTTGG
TGTTTCCGAGGGAAAGTGTGGATGGTCTGATTGAGTTCTTGAGCGCAAGA
GGACATGGTCAGACGGACTCTATGATAGAAGAATACGCTGATCAGAGCCA
GTTGACTCGATACGCTCTCGCACCGCCCCAGCTGCAGCATGTGGGGTTGA
AGTCGAGCCGGAACAATCTTGACATCAATACTCAGAGTACGTGGGCATTT
TGGTTCGAGACCAATGATCCGGCCAATTTGAGAAGAGAGCACGCTACGCT
TCTGGAAGATGATGATGTGGAGAGGATGTTGAACGTATAGACACCATCAG
AATATAATTCTCGATCTGAAAATAGTTGAAGGCGAATTGTTAATTCCACC
AGATCACTGGAAAGCGATGGAAGTGCCTATGATTGGGCCAATTTCGCCCG
ATGCCCAAGTTTAGAATGGACATCAATGTACACTGTGATCTATTTAGATT
GTATATAGTAGATTTAGAGTTGGTGTACCGACACACAG back to topCoding sequence (CDS) from alignment at ch1:2665818..2667505- >KJC3_001048-T1 ID=KJC3_001048-T1|Name=KJC3_001048-T1|organism=Aspergillus niger KJC3|type=CDS|length=2628bp|location=Sequence derived from alignment at ch1:2665818..2667505- (Aspergillus niger KJC3)
CGATTATATATACGCCCTACGAGCCTGTCAGGAAGTAAACGCCCCCTACA
CCATCATTTTCGAAGACGACATCATCGTTGCCACAGGGTGGTTCTCGAAG
ACTCTGAAGGCGCTCTCCGATATTTCACAACGGAATCAACAGCCAAGGAA
TTCCTGGATCTATCTCCGTCTTTTCTACACCGAGACCTCATTGGGCTGGA
GCGATTCCGACATGGCATACACAAACATGACCCTGATATTTGGCCTTCTC
ATGCTGTCTACATTCTCATCCTTATCAATGCTTCGGCACACTCGGTTCCA
ACGGCTGCACCTTGACACCCTGAGCATCGTGGTTATTTCTATGATATGCG
TTCCAGCCTTCACCGCACTCGTATACATGGCCGGAAAATACAACGTAATG
CCGCTCCATGGTGTTGTCGAGATGAACCAGTATGGATGTTGCACCCAGGG
CTTGGTGTTTCCGAGGGAAAGTGTGGATGGTCTGATTGAGTTCTTGAGCG
CAAGAGGACATGGTCAGACGGACTCTATGATAGAAGAATACGCTGATCAG
AGCCAGTTGACTCGATACGCTCTCGCACCGCCCCAGCTGCAGCATGTGGG
GTTGAAGTCGAGCCGGAACAATCTTGACATCAATACTCAGAGTACGTGGG
CATTTTGGTTCGAGACCAATGATCCGGCCAATTTGAGAAGAGAGCACGCT
ACGCTTCTGGAAGATGATGATGTGGAGAGGATGTTGAACGTATAGATGCT
CCCTATCCCTCCGACAAGAGTCGCCAAACAATTCTTCACACATCTCCCGT
ATTATCTCCAACTACGCGCATCGAAGATCCTCATTTCTAGCTTTTTCGTC
TGGCTTTTAATATTCTACTATTGCCGAGTCACCCTCTGGCGTGATCCACA
CTCTGCCTATTTCCAAGACCGCCATGTCTACGAGCTGGATTACAGTCTCC
ACCGCGAACGTGAGGCCTGGCATTTTATCTCACAGCATAATTCGGGCATA
GATCCACCAGATTATGTGAAGAGTGGAAGCACACCATCTGTTTGTATAGC
CATGGTCACTGTTCGACGAGACTCGGACCATTATTTTGAGGCATCTGTTG
GCTCGCTGTTGGAGGGCCTGGATGAAAGGGAGCGACAAGCGTTGTATCTC
AGTATTCTCTTTGCAGATACAGATCCGAGAGTACATCCCAGTTGGGATCA
GAAATGGGTGGGCAGGCTCGTGGACTCAGCGGATAGTTATAACGTGACAG
AAGGACAACTTCAGCATTTGCAGGACCTGGAGAAAGAGAAGAATTTCTAT
GAGAAGGGAGTCTTCGATTATATATACGCCCTACGAGCCTGTCAGGAAGT
AAACGCCCCCTACACCATCATTTTCGAAGACGACATCATCGTTGCCACAG
GGTGGTTCTCGAAGACTCTGAAGGCGCTCTCCGATATTTCACAACGGAAT
CAACAGCCAAGGAATTCCTGGATCTATCTCCGTCTTTTCTACACCGAGAC
CTCATTGGGCTGGAGCGATTCCGACATGGCATACACAAACATGACCCTGA
TATTTGGCCTTCTCATGCTGTCTACATTCTCATCCTTATCAATGCTTCGG
CACACTCGGTTCCAACGGCTGCACCTTGACACCCTGAGCATCGTGGTTAT
TTCTATGATATGCGTTCCAGCCTTCACCGCACTCGTATACATGGCCGGAA
AATACAACGTAATGCCGCTCCATGGTGTTGTCGAGATGAACCAGTATGGA
TGTTGCACCCAGGGCTTGGTGTTTCCGAGGGAAAGTGTGGATGGTCTGAT
TGAGTTCTTGAGCGCAAGAGGACATGGTCAGACGGACTCTATGATAGAAG
AATACGCTGATCAGAGCCAGTTGACTCGATACGCTCTCGCACCGCCCCAG
CTGCAGCATGTGGGGTTGAAGTCGAGCCGGAACAATCTTGACATCAATAC
TCAGAGTACGTGGGCATTTTGGTTCGAGACCAATGATCCGGCCAATTTGA
GAAGAGAGCACGCTACGCTTCTGGAAGATGATGATGTGGAGAGGATGTTG
AACGTATAGATGCTCCCTATCCCTCCGACAAGAGTCGCCAAACAATTCTT
CACACATCTCCCGTATTATCTCCAACTACGCGCATCGAAGATCCTCATTT
CTAGCTTTTTCGTCTGGCTTTTAATATTCTACTATTGCCGAGTCACCCTC
TGGCGTGATCCACACTCTGCCTATTTCCAAGACCGCCATGTCTACGAGCT
GGATTACAGTCTCCACCGCGAACGTGAGGCCTGGCATTTTATCTCACAGC
ATAATTCGGGCATAGATCCACCAGATTATGTGAAGAGTGGAAGCACACCA
TCTGTTTGTATAGCCATGGTCACTGTTCGACGAGACTCGGACCATTATTT
TGAGGCATCTGTTGGCTCGCTGTTGGAGGGCCTGGATGAAAGGGAGCGAC
AAGCGTTGTATCTCAGTATTCTCTTTGCAGATACAGATCCGAGAGTACAT
CCCAGTTGGGATCAGAAATGGGTGGGCAGGCTCGTGGACTCAGCGGATAG
TTATAACGTGACAGAAGGACAACTTCAGCATTTGCAGGACCTGGAGAAAG
AGAAGAATTTCTATGAGAAGGGAGTCTT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001048-T1.utr3p1 | KJC3_001048-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001048-T1.utr5p1 | KJC3_001048-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | PFAM:PF04666 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2665818..2667505 - |
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