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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2677806..2678360- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001054-T1 ID=KJC3_001054-T1|Name=KJC3_001054-T1|organism=Aspergillus niger KJC3|type=mRNA|length=555bp|location=Sequence derived from alignment at ch1:2677806..2678360- (Aspergillus niger KJC3)
CATCAATCAAGTCCATCCACGAACTACACTAGATCGCAAAGATGGTAAGC
AGTGCGGCGCACTGGATGAGTTATTAGTGACAAGACCATACTAATAGTAT
ATATAGGAGAGTCCACATGAGCACCAGCAGGCCCTGCTGCTATCCCGCAT
TATCGGCAACATCGTATGTCACCCAGAGGGCATCCTAGGTTGCAATGGCT
GATCGGCTTTAGGAAAAATTGAATGAGTCAATCATGGTTATGAACAGAAG
CCTCCAGGTAAGCACATTTGCTCGCTTTTCTTCATGATAGAGTACTGATG
GGCTTCATTAGGAGGTCAATATCCAGAACATGAACGTCGAACTCGTCGCA
CAGATGTTCAAGAACTACCAGTCTAACATTCTATTCCATCTAGAAGGTAA
TTTCCCTTAGGATGCTTGGTTGGACTTGGCTGATCAGCATTAGCGACGGA
GAATTTGAAAGATCCATCATCCTCGTCGTCCAGTTCTTGATACCCAACAG
TGTTTCCCAGTTATTTTACCTAGTTATTTGATAATGAAGACATGATACAC
ACGTG back to topCoding sequence (CDS) from alignment at ch1:2677806..2678360- >KJC3_001054-T1 ID=KJC3_001054-T1|Name=KJC3_001054-T1|organism=Aspergillus niger KJC3|type=CDS|length=1185bp|location=Sequence derived from alignment at ch1:2677806..2678360- (Aspergillus niger KJC3)
CGACGGAGAATTTGAAAGATCCATCATCCTCGTCGTCCAGTTCTTGAGAG
GTCAATATCCAGAACATGAACGTCGAACTCGTCGCACAGATGTTCAAGAA
CTACCAGTCTAACATTCTATTCCATCTAGAAGGAAAAATTGAATGAGTCA
ATCATGGTTATGAACAGAAGCCTCCAGGAGAGTCCACATGAGCACCAGCA
GGCCCTGCTGCTATCCCGCATTATCGGCAACATCATGCGACGGAGAATTT
GAAAGATCCATCATCCTCGTCGTCCAGTTCTTGAGAGGTCAATATCCAGA
ACATGAACGTCGAACTCGTCGCACAGATGTTCAAGAACTACCAGTCTAAC
ATTCTATTCCATCTAGAAGGAAAAATTGAATGAGTCAATCATGGTTATGA
ACAGAAGCCTCCAGGAGAGTCCACATGAGCACCAGCAGGCCCTGCTGCTA
TCCCGCATTATCGGCAACATCATGCGACGGAGAATTTGAAAGATCCATCA
TCCTCGTCGTCCAGTTCTTGAGAGGTCAATATCCAGAACATGAACGTCGA
ACTCGTCGCACAGATGTTCAAGAACTACCAGTCTAACATTCTATTCCATC
TAGAAGGAAAAATTGAATGAGTCAATCATGGTTATGAACAGAAGCCTCCA
GGAGAGTCCACATGAGCACCAGCAGGCCCTGCTGCTATCCCGCATTATCG
GCAACATCATGCGACGGAGAATTTGAAAGATCCATCATCCTCGTCGTCCA
GTTCTTGAGAGGTCAATATCCAGAACATGAACGTCGAACTCGTCGCACAG
ATGTTCAAGAACTACCAGTCTAACATTCTATTCCATCTAGAAGGAAAAAT
TGAATGAGTCAATCATGGTTATGAACAGAAGCCTCCAGGAGAGTCCACAT
GAGCACCAGCAGGCCCTGCTGCTATCCCGCATTATCGGCAACATCATGCG
ACGGAGAATTTGAAAGATCCATCATCCTCGTCGTCCAGTTCTTGAGAGGT
CAATATCCAGAACATGAACGTCGAACTCGTCGCACAGATGTTCAAGAACT
ACCAGTCTAACATTCTATTCCATCTAGAAGGAAAAATTGAATGAGTCAAT
CATGGTTATGAACAGAAGCCTCCAGGAGAGTCCACATGAGCACCAGCAGG
CCCTGCTGCTATCCCGCATTATCGGCAACATCATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0072686 | mitotic spindle |
| GO:0042729 | DASH complex |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008608 | attachment of spindle microtubules to kinetochore |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001054-T1.utr3p1 | KJC3_001054-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001054-T1.utr5p1 | KJC3_001054-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013959 |
| DBxref | PFAM:PF08650 |
| Product | DASH complex subunit dad4 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2677806..2678360 - |
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