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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2678483..2679935+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001055-T1 ID=KJC3_001055-T1|Name=KJC3_001055-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1453bp|location=Sequence derived from alignment at ch1:2678483..2679935+ (Aspergillus niger KJC3)
CTTATTCTGTAACTTCACTACTTTTTTTTCATTCTATCTCCGGAATATCA
GTAATTATTACTGCGCCATCTGATAATCAAAGTTGGTGACATTGGTGCGC
ATCGTGCATTCTTCCTTCACAACTTGAGCAAGGCCTGGACGAGGACGACT
TAGCACCGCCAGACTCCCAGTTCGGATTCAGCAATCAACCCTCCACAACT
GATCAATACTCCGGCCTCATCCCTTCATCCAAAGCTCACTCGCATCTCAA
CGCCCCATCATCGCCATGGCTCCTCTGACCCCCGCCGAACAGGAGAATCA
CCAAGCGCTTCTCGATCGCCTTGACATTGCGGCAGTTCCCCGTCCGTTCC
GCAATCCGAATTGGAAGCCATCGCAGCGTCGCAACAAGAACGTGAAGCAG
CTTATTTCTGAGAGCTCTAGGAAGGAGGCGTCCGTCATGGCGACACAGTC
CAATTCTGGCGCAACCACCCCGCTCGCAGCTACGTCCGCCAGCACCGACG
GCAGCCAAACCCCTGCCGATGGCACACCCCGAACGAACATCGCGCAGGCT
GCGCAGAACCTCTCCACACTGGTGTTGGAAAAGAACGCACGAGCTGCATT
TACATCTGGACCTGCCGTAACGTACACGAATATCGAATCCGCGCCCTCGT
TGCACCCGTCGCAGCAAACCCGCTACTGCGATATAACCGGCCTACCTGCG
CCATACACAGATCCCAAGACCAGACTGAGGTACCACGATAAGGAGATCTT
TGGTGTGATCAGGACACTTGGTCAGGGAGTGCCGGAGAGCTATTTGGAAC
TAAGGGCTGCCCATGTTGTTCTTAAATGATGCGATGATTTTGCTACGGAA
ATGTTTGTTTTATTTGTAAGATATCAGGGTAAGGCGCTGAATTTCTGTAC
AGAGATAATGCATTCGAATCTTAACGAAGGTCCTGCCAGATAGCAGCCTA
ATCTAATACGCGATTTATGTACGGCCAACACAGTCAAGCCCTTTCCACCC
ACCATGCCCCTCTCGAGACAGGTTCAAAGAAAGCGCTCCGGCTTATTCGT
GACCTTATAAAAGTTTATCTTCGCCTTGTGCAAGTTGCACTCGACTAGTA
CCGAAGCTCCAGGAACGGAGCATCAGTTACAGCATCCGAAGATGCTGTTG
CCGCGGCGTGAAATGAGAGTTTAGCCCAAGGGCTCGCTAGGTATAAACCG
GCAGGATATTTGCAGTAACAGAGTGGCTAATTGAAGCCATCTTGATACCT
CATACCGTTGTATGCACTCCTTTTGTAGAAGCGATGCGTGTCTCCTGCAT
TGATGCATTAATCATGTCGTAGAGGTATTGCACACGAGAGGCTTGACTAG
ATGTTCCATCATCAAAGACCATAGTCAATGGCATGCAATCTGAAGAATGT
TGTCGACACGCATCGTTCTCCCCCGATGGTAAACATTAGGAGGTAGAATC
GGT back to topCoding sequence (CDS) from alignment at ch1:2678483..2679935+ >KJC3_001055-T1 ID=KJC3_001055-T1|Name=KJC3_001055-T1|organism=Aspergillus niger KJC3|type=CDS|length=564bp|location=Sequence derived from alignment at ch1:2678483..2679935+ (Aspergillus niger KJC3)
ATGGCTCCTCTGACCCCCGCCGAACAGGAGAATCACCAAGCGCTTCTCGA
TCGCCTTGACATTGCGGCAGTTCCCCGTCCGTTCCGCAATCCGAATTGGA
AGCCATCGCAGCGTCGCAACAAGAACGTGAAGCAGCTTATTTCTGAGAGC
TCTAGGAAGGAGGCGTCCGTCATGGCGACACAGTCCAATTCTGGCGCAAC
CACCCCGCTCGCAGCTACGTCCGCCAGCACCGACGGCAGCCAAACCCCTG
CCGATGGCACACCCCGAACGAACATCGCGCAGGCTGCGCAGAACCTCTCC
ACACTGGTGTTGGAAAAGAACGCACGAGCTGCATTTACATCTGGACCTGC
CGTAACGTACACGAATATCGAATCCGCGCCCTCGTTGCACCCGTCGCAGC
AAACCCGCTACTGCGATATAACCGGCCTACCTGCGCCATACACAGATCCC
AAGACCAGACTGAGGTACCACGATAAGGAGATCTTTGGTGTGATCAGGAC
ACTTGGTCAGGGAGTGCCGGAGAGCTATTTGGAACTAAGGGCTGCCCATG
TTGTTCTTAAATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001055-T1.utr5p1 | KJC3_001055-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264I14 |
| DBxref | InterPro:IPR013272 |
| DBxref | PFAM:PF08265 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2678483..2679935 + |
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