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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2680402..2681114+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001056-T1 ID=KJC3_001056-T1|Name=KJC3_001056-T1|organism=Aspergillus niger KJC3|type=mRNA|length=713bp|location=Sequence derived from alignment at ch1:2680402..2681114+ (Aspergillus niger KJC3)
ATGCCTACAATGTGGTTGTCCGATAATCAGAGTAAGAAACGCCTACTTTG
CACACTTCGCACGAAAGCATATCCGGGTCATTGGCTAACGCACGTCCTTC
CTACAACAGAGATCGGAGTTATCTTCTGCTCAGCTGGTATGTCTACCTAA
CAGGCTTGCGACGACCTATACAACCAACCGCTCCATACACATACTAACGA
TGTCCCCCAACAGGAGGCTTGTTCCTCTTCGGCGGAGTCCTAATGTTCTT
CGATCGCTCACTGTACGTCCATATCCAACCCAACTCTATAATCCAAATAC
ATAATATAACTAACAAAACTAACAATCTAGCCTGGCAATGGGAAACGTAC
GCCGTCCTAAACTACCCTACTCCAATGCGATATGTGGGAACCCCCAACTA
ACCCACTCCACCGCAGATCCTCTTCCTCATCGGCCTCACCCTAATAATCG
GCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGC
ACCGCTGCCTTCACCGCTGGAATCCTACTCATTCTCCTCCGCTGGCCGCT
AACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTCGGCGACT
TCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCA
TTTATTCAAAAGGTTCTGGAGACGCTGGCGGGTGGAAGAAGGAATGCGGA
GTTGCCTGTATAG back to topCoding sequence (CDS) from alignment at ch1:2680402..2681114+ >KJC3_001056-T1 ID=KJC3_001056-T1|Name=KJC3_001056-T1|organism=Aspergillus niger KJC3|type=CDS|length=2100bp|location=Sequence derived from alignment at ch1:2680402..2681114+ (Aspergillus niger KJC3)
ATGCCTACAATGTGGTTGTCCGATAATCAGAAGATCGGAGTTATCTTCTG
CTCAGCTGGAGGCTTGTTCCTCTTCGGCGGAGTCCTAATGTTCTTCGATC
GCTCACTCCTGGCAATGGGAAACATCCTCTTCCTCATCGGCCTCACCCTA
ATAATCGGCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACT
CAAGGGCACCGCTGCCTTCACCGCTGGAATCCTACTCATTCTCCTCCGCT
GGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTC
GGCGACTTCCTGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGT
GGGACCATTTATTCAAAAGGTTCTGGAGACGCTGGCGGGTGGAAGAAGGA
ATGCGGAGTTGCCTGTATAGATGCCTACAATGTGGTTGTCCGATAATCAG
AAGATCGGAGTTATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTTCGGCGG
AGTCCTAATGTTCTTCGATCGCTCACTCCTGGCAATGGGAAACATCCTCT
TCCTCATCGGCCTCACCCTAATAATCGGCCTCGAAAAGACCTTCGCCTTC
TTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCTGGAAT
CCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGT
ACGGTCTCTTCATCCTCTTCGGCGACTTCCTGATCACAATTGGCCAGTTC
GCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTGGAGAC
GCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAGATGCCTACAA
TGTGGTTGTCCGATAATCAGAAGATCGGAGTTATCTTCTGCTCAGCTGGA
GGCTTGTTCCTCTTCGGCGGAGTCCTAATGTTCTTCGATCGCTCACTCCT
GGCAATGGGAAACATCCTCTTCCTCATCGGCCTCACCCTAATAATCGGCC
TCGAAAAGACCTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACC
GCTGCCTTCACCGCTGGAATCCTACTCATTCTCCTCCGCTGGCCGCTAAC
CGGGTTCATAATCGAGTTGTACGGTCTCTTCATCCTCTTCGGCGACTTCC
TGATCACAATTGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTT
ATTCAAAAGGTTCTGGAGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTT
GCCTGTATAGATGCCTACAATGTGGTTGTCCGATAATCAGAAGATCGGAG
TTATCTTCTGCTCAGCTGGAGGCTTGTTCCTCTTCGGCGGAGTCCTAATG
TTCTTCGATCGCTCACTCCTGGCAATGGGAAACATCCTCTTCCTCATCGG
CCTCACCCTAATAATCGGCCTCGAAAAGACCTTCGCCTTCTTCTCCCGTC
GCCAAAAACTCAAGGGCACCGCTGCCTTCACCGCTGGAATCCTACTCATT
CTCCTCCGCTGGCCGCTAACCGGGTTCATAATCGAGTTGTACGGTCTCTT
CATCCTCTTCGGCGACTTCCTGATCACAATTGGCCAGTTCGCGGGGAATA
TCCCCGTCGTGGGACCATTTATTCAAAAGGTTCTGGAGACGCTGGCGGGT
GGAAGAAGGAATGCGGAGTTGCCTGTATAGATGCCTACAATGTGGTTGTC
CGATAATCAGAAGATCGGAGTTATCTTCTGCTCAGCTGGAGGCTTGTTCC
TCTTCGGCGGAGTCCTAATGTTCTTCGATCGCTCACTCCTGGCAATGGGA
AACATCCTCTTCCTCATCGGCCTCACCCTAATAATCGGCCTCGAAAAGAC
CTTCGCCTTCTTCTCCCGTCGCCAAAAACTCAAGGGCACCGCTGCCTTCA
CCGCTGGAATCCTACTCATTCTCCTCCGCTGGCCGCTAACCGGGTTCATA
ATCGAGTTGTACGGTCTCTTCATCCTCTTCGGCGACTTCCTGATCACAAT
TGGCCAGTTCGCGGGGAATATCCCCGTCGTGGGACCATTTATTCAAAAGG
TTCTGGAGACGCTGGCGGGTGGAAGAAGGAATGCGGAGTTGCCTGTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016192 | vesicle-mediated transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007305 |
| DBxref | PFAM:PF04178 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2680402..2681114 + |
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