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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch1:2705943..2708436- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_001068-T1 ID=KJC3_001068-T1|Name=KJC3_001068-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2494bp|location=Sequence derived from alignment at ch1:2705943..2708436- (Aspergillus niger KJC3)
CCAAGGGTTCTGTCTGAAGGTCTCTGTGTCTGAACGCATTCACCCCGCCG
CTGCACCCTTCCCTGTCCCATTGTCTCGCGATCCACGCGCACCAGGACGG
CAATGCTTCTTTCCCAAACCCGGGGGCGTATGCCCTCCACTCTCCGGAGC
ATCGCCAAGCGCTCTTTGCTGAACAGGTATGAATAACGGCCTAGAACATG
AGCTTCATGCTCCAAATTGCTTCAGAATACGGGCTGATTTTAGTTTTACT
CATCCAGTCGCCCTCTGTCTACCACTCTGCCCAAGCAACAGAACGGCAAC
GATGACGAGTATACTGGTCTCAACAAGGTCTCCCGCCACATTACCCAGCC
CATCTCCCAGGGTGCTTCCCAGGCCATGCTGTATGCCGCAGGCCTCACTG
AGGCGGACATGAACAAGGCTCAGGTCGGCATTTCTTCTGTCTGGTACAAT
GGCAACCCCTGCAACATGCATCTGCTCGATCTTAACAACCGTGTCCGCGA
GGGTGTCCAGAAGGCCGGTTTGGTCGGTTTCCAGTTCAACACCGTCGGTG
TTAGCGATGCTATCAGTATGGGTACCAAGGGAATGCGATTCTCTCTCCAG
AGTCGTGATCTGATTGCCGACTCTATCGAGACCGTTATGGGTGGTCAATG
GTATGACGCTAACATCAGCATTCCCGGCTGTGACAAGAACATGCCTGGTG
TGTTGATGGCAATGGGACGAGTGAACCGCCCCAGTTTGATGGTCTACGGT
GGAACCATCAAGCCTGGTTGCGCCTCCATGCAGGGCAACGCCGACATTGA
TATCGTCTCCGCCTTCCAGGCCTATGGTCAGTTCATCAGTAAGGAAATCA
CCGAGCCCCAGAGATTTGACATTATCCGCAACGCCTGCCCTGGAGGTGGT
GCTTGCGGTGGTATGTACACTGCCAATACCATGGCCACTGCTATCGAAGT
CATGGGCATGACCCTTCCTGGATCCTCTTCCAACCCCGCCGAGTCTGACG
CTAAGTACCTTGAATGTCTTGCGGCTGGTGAGGCCATCAAGACCCTGCTC
AAGGAGGACATTCGTCCTTCGGACATCCTGACTCGCCAGGCTTTCGAGAA
CGCCATGGTCTTGGTCAACATCACTGGTGGCTCCACCAACGCCGTTCTTC
ACTTGATTGCCATTGCGGACTCTGTTGGTATCAAGCTCGACATTGAAGAC
TTCCAGTCCGTCTCGGATCGCATTCCTTTCCTGGCGGACCTTAAGCCTTC
CGGCAAGTACGTCATGGCTGACCTTCACAAGATCGGTGGTACCCCCTCCC
TGCTCAAGTTCTTGCTGAAGGAAGGTCTCATCGATGGCTCTGGCATGACT
GTCACTGGTCAGACCCTGGCCAAGAACTTGGAGAATGTGCCGGACTTCCC
TGAGGATCAGAAGATCATCCGTCCCCTGTCCAACCCCATCAAGGAGACTG
GCCACATCCAGATCTTGAGGGGTTCTCTGGCCCCGGGTGGCAGTGTCGGC
AAGATCACTGGTAAGGAAGGAACCGTCTTCACTGGAAAGGCTCGCGTCTT
TGACGACGAGGATGATTTCATTGCTGCTCTCGAGCGCAACGAGATCAAGA
AGGAGGAGAAGACTGTTGTTGTCATCCGCTACACTGGTCCTAAGGGAGGA
CCTGGCATGCCCGGTAAGTCGCTACAGCAAAACTTTCCCCTATCACTGCG
CACGTGTGTCGGTAAAGCTAATTAAAGTGTGACGAGTAGAAATGCTGAAG
CCCTCTTCCGCCCTGATGGGTGCCGGTCTCGGACAGTCCTGCGCTCTGAT
CACCGATGGCCGTTTCTCTGGTGGTTCTCACGGTTTCTTGATCGGACACA
TTGTTCCCGAAGCCGCCGTCGGTGGCCCCATTGGCTTGGTTAAGGATGGT
GATGTCATCACCATTGACGCCGAGAAGCGTGTTCTGGACCTTGATGTTGA
GGAGACCGAGCTCGCGCAAAGAAGAAAGCAGTGGGAAGCCGACAGGGCTG
CTGGCAAGCTCCCTCCCACCGGCCTGACCCTGAGAGGTACTCTCGGCAAG
TACGCTAGGTACGTAATACTCTTTTAATTGGCATAGCATCTGTCAATAAG
ATGCATATCCGTGACCCATATCTGAACACGATACTAACATCACACTATAG
AACCGTCAAGGATGCCAGCCACGGCTGTATCACCGACTCTCTCGAATAAA
CGGAATGGCATATGTGATTATATGTCCTTCTTTGCGTTTATATATCTCTT
CGAAAGTAACATGTGTCTTATATCAATTTCTTTTTCCTTTTCAGCTACTC
TATCTGGGATGATTTTGGGTCGTTTTGAGTCTGGGACCGCACGTGGCTAC
TGTTTTGTATAGGCGAATTGAAACGAACCAAAAGTGCTGCTTGTTATGAC
CTCACTATATGGTCTCGTGTATTTACTGAAGATCAAATACAGCAAATAAT
ATTGTTAAGAAAATATGTACTCTTCATGAACGGCGAGAGAGGGC back to topCoding sequence (CDS) from alignment at ch1:2705943..2708436- >KJC3_001068-T1 ID=KJC3_001068-T1|Name=KJC3_001068-T1|organism=Aspergillus niger KJC3|type=CDS|length=7392bp|location=Sequence derived from alignment at ch1:2705943..2708436- (Aspergillus niger KJC3)
AACCGTCAAGGATGCCAGCCACGGCTGTATCACCGACTCTCTCGAATAAA
AATGCTGAAGCCCTCTTCCGCCCTGATGGGTGCCGGTCTCGGACAGTCCT
GCGCTCTGATCACCGATGGCCGTTTCTCTGGTGGTTCTCACGGTTTCTTG
ATCGGACACATTGTTCCCGAAGCCGCCGTCGGTGGCCCCATTGGCTTGGT
TAAGGATGGTGATGTCATCACCATTGACGCCGAGAAGCGTGTTCTGGACC
TTGATGTTGAGGAGACCGAGCTCGCGCAAAGAAGAAAGCAGTGGGAAGCC
GACAGGGCTGCTGGCAAGCTCCCTCCCACCGGCCTGACCCTGAGAGGTAC
TCTCGGCAAGTACGCTAGTCGCCCTCTGTCTACCACTCTGCCCAAGCAAC
AGAACGGCAACGATGACGAGTATACTGGTCTCAACAAGGTCTCCCGCCAC
ATTACCCAGCCCATCTCCCAGGGTGCTTCCCAGGCCATGCTGTATGCCGC
AGGCCTCACTGAGGCGGACATGAACAAGGCTCAGGTCGGCATTTCTTCTG
TCTGGTACAATGGCAACCCCTGCAACATGCATCTGCTCGATCTTAACAAC
CGTGTCCGCGAGGGTGTCCAGAAGGCCGGTTTGGTCGGTTTCCAGTTCAA
CACCGTCGGTGTTAGCGATGCTATCAGTATGGGTACCAAGGGAATGCGAT
TCTCTCTCCAGAGTCGTGATCTGATTGCCGACTCTATCGAGACCGTTATG
GGTGGTCAATGGTATGACGCTAACATCAGCATTCCCGGCTGTGACAAGAA
CATGCCTGGTGTGTTGATGGCAATGGGACGAGTGAACCGCCCCAGTTTGA
TGGTCTACGGTGGAACCATCAAGCCTGGTTGCGCCTCCATGCAGGGCAAC
GCCGACATTGATATCGTCTCCGCCTTCCAGGCCTATGGTCAGTTCATCAG
TAAGGAAATCACCGAGCCCCAGAGATTTGACATTATCCGCAACGCCTGCC
CTGGAGGTGGTGCTTGCGGTGGTATGTACACTGCCAATACCATGGCCACT
GCTATCGAAGTCATGGGCATGACCCTTCCTGGATCCTCTTCCAACCCCGC
CGAGTCTGACGCTAAGTACCTTGAATGTCTTGCGGCTGGTGAGGCCATCA
AGACCCTGCTCAAGGAGGACATTCGTCCTTCGGACATCCTGACTCGCCAG
GCTTTCGAGAACGCCATGGTCTTGGTCAACATCACTGGTGGCTCCACCAA
CGCCGTTCTTCACTTGATTGCCATTGCGGACTCTGTTGGTATCAAGCTCG
ACATTGAAGACTTCCAGTCCGTCTCGGATCGCATTCCTTTCCTGGCGGAC
CTTAAGCCTTCCGGCAAGTACGTCATGGCTGACCTTCACAAGATCGGTGG
TACCCCCTCCCTGCTCAAGTTCTTGCTGAAGGAAGGTCTCATCGATGGCT
CTGGCATGACTGTCACTGGTCAGACCCTGGCCAAGAACTTGGAGAATGTG
CCGGACTTCCCTGAGGATCAGAAGATCATCCGTCCCCTGTCCAACCCCAT
CAAGGAGACTGGCCACATCCAGATCTTGAGGGGTTCTCTGGCCCCGGGTG
GCAGTGTCGGCAAGATCACTGGTAAGGAAGGAACCGTCTTCACTGGAAAG
GCTCGCGTCTTTGACGACGAGGATGATTTCATTGCTGCTCTCGAGCGCAA
CGAGATCAAGAAGGAGGAGAAGACTGTTGTTGTCATCCGCTACACTGGTC
CTAAGGGAGGACCTGGCATGCCCGATGCTTCTTTCCCAAACCCGGGGGCG
TATGCCCTCCACTCTCCGGAGCATCGCCAAGCGCTCTTTGCTGAACAGAA
CCGTCAAGGATGCCAGCCACGGCTGTATCACCGACTCTCTCGAATAAAAA
TGCTGAAGCCCTCTTCCGCCCTGATGGGTGCCGGTCTCGGACAGTCCTGC
GCTCTGATCACCGATGGCCGTTTCTCTGGTGGTTCTCACGGTTTCTTGAT
CGGACACATTGTTCCCGAAGCCGCCGTCGGTGGCCCCATTGGCTTGGTTA
AGGATGGTGATGTCATCACCATTGACGCCGAGAAGCGTGTTCTGGACCTT
GATGTTGAGGAGACCGAGCTCGCGCAAAGAAGAAAGCAGTGGGAAGCCGA
CAGGGCTGCTGGCAAGCTCCCTCCCACCGGCCTGACCCTGAGAGGTACTC
TCGGCAAGTACGCTAGTCGCCCTCTGTCTACCACTCTGCCCAAGCAACAG
AACGGCAACGATGACGAGTATACTGGTCTCAACAAGGTCTCCCGCCACAT
TACCCAGCCCATCTCCCAGGGTGCTTCCCAGGCCATGCTGTATGCCGCAG
GCCTCACTGAGGCGGACATGAACAAGGCTCAGGTCGGCATTTCTTCTGTC
TGGTACAATGGCAACCCCTGCAACATGCATCTGCTCGATCTTAACAACCG
TGTCCGCGAGGGTGTCCAGAAGGCCGGTTTGGTCGGTTTCCAGTTCAACA
CCGTCGGTGTTAGCGATGCTATCAGTATGGGTACCAAGGGAATGCGATTC
TCTCTCCAGAGTCGTGATCTGATTGCCGACTCTATCGAGACCGTTATGGG
TGGTCAATGGTATGACGCTAACATCAGCATTCCCGGCTGTGACAAGAACA
TGCCTGGTGTGTTGATGGCAATGGGACGAGTGAACCGCCCCAGTTTGATG
GTCTACGGTGGAACCATCAAGCCTGGTTGCGCCTCCATGCAGGGCAACGC
CGACATTGATATCGTCTCCGCCTTCCAGGCCTATGGTCAGTTCATCAGTA
AGGAAATCACCGAGCCCCAGAGATTTGACATTATCCGCAACGCCTGCCCT
GGAGGTGGTGCTTGCGGTGGTATGTACACTGCCAATACCATGGCCACTGC
TATCGAAGTCATGGGCATGACCCTTCCTGGATCCTCTTCCAACCCCGCCG
AGTCTGACGCTAAGTACCTTGAATGTCTTGCGGCTGGTGAGGCCATCAAG
ACCCTGCTCAAGGAGGACATTCGTCCTTCGGACATCCTGACTCGCCAGGC
TTTCGAGAACGCCATGGTCTTGGTCAACATCACTGGTGGCTCCACCAACG
CCGTTCTTCACTTGATTGCCATTGCGGACTCTGTTGGTATCAAGCTCGAC
ATTGAAGACTTCCAGTCCGTCTCGGATCGCATTCCTTTCCTGGCGGACCT
TAAGCCTTCCGGCAAGTACGTCATGGCTGACCTTCACAAGATCGGTGGTA
CCCCCTCCCTGCTCAAGTTCTTGCTGAAGGAAGGTCTCATCGATGGCTCT
GGCATGACTGTCACTGGTCAGACCCTGGCCAAGAACTTGGAGAATGTGCC
GGACTTCCCTGAGGATCAGAAGATCATCCGTCCCCTGTCCAACCCCATCA
AGGAGACTGGCCACATCCAGATCTTGAGGGGTTCTCTGGCCCCGGGTGGC
AGTGTCGGCAAGATCACTGGTAAGGAAGGAACCGTCTTCACTGGAAAGGC
TCGCGTCTTTGACGACGAGGATGATTTCATTGCTGCTCTCGAGCGCAACG
AGATCAAGAAGGAGGAGAAGACTGTTGTTGTCATCCGCTACACTGGTCCT
AAGGGAGGACCTGGCATGCCCGATGCTTCTTTCCCAAACCCGGGGGCGTA
TGCCCTCCACTCTCCGGAGCATCGCCAAGCGCTCTTTGCTGAACAGAACC
GTCAAGGATGCCAGCCACGGCTGTATCACCGACTCTCTCGAATAAAAATG
CTGAAGCCCTCTTCCGCCCTGATGGGTGCCGGTCTCGGACAGTCCTGCGC
TCTGATCACCGATGGCCGTTTCTCTGGTGGTTCTCACGGTTTCTTGATCG
GACACATTGTTCCCGAAGCCGCCGTCGGTGGCCCCATTGGCTTGGTTAAG
GATGGTGATGTCATCACCATTGACGCCGAGAAGCGTGTTCTGGACCTTGA
TGTTGAGGAGACCGAGCTCGCGCAAAGAAGAAAGCAGTGGGAAGCCGACA
GGGCTGCTGGCAAGCTCCCTCCCACCGGCCTGACCCTGAGAGGTACTCTC
GGCAAGTACGCTAGTCGCCCTCTGTCTACCACTCTGCCCAAGCAACAGAA
CGGCAACGATGACGAGTATACTGGTCTCAACAAGGTCTCCCGCCACATTA
CCCAGCCCATCTCCCAGGGTGCTTCCCAGGCCATGCTGTATGCCGCAGGC
CTCACTGAGGCGGACATGAACAAGGCTCAGGTCGGCATTTCTTCTGTCTG
GTACAATGGCAACCCCTGCAACATGCATCTGCTCGATCTTAACAACCGTG
TCCGCGAGGGTGTCCAGAAGGCCGGTTTGGTCGGTTTCCAGTTCAACACC
GTCGGTGTTAGCGATGCTATCAGTATGGGTACCAAGGGAATGCGATTCTC
TCTCCAGAGTCGTGATCTGATTGCCGACTCTATCGAGACCGTTATGGGTG
GTCAATGGTATGACGCTAACATCAGCATTCCCGGCTGTGACAAGAACATG
CCTGGTGTGTTGATGGCAATGGGACGAGTGAACCGCCCCAGTTTGATGGT
CTACGGTGGAACCATCAAGCCTGGTTGCGCCTCCATGCAGGGCAACGCCG
ACATTGATATCGTCTCCGCCTTCCAGGCCTATGGTCAGTTCATCAGTAAG
GAAATCACCGAGCCCCAGAGATTTGACATTATCCGCAACGCCTGCCCTGG
AGGTGGTGCTTGCGGTGGTATGTACACTGCCAATACCATGGCCACTGCTA
TCGAAGTCATGGGCATGACCCTTCCTGGATCCTCTTCCAACCCCGCCGAG
TCTGACGCTAAGTACCTTGAATGTCTTGCGGCTGGTGAGGCCATCAAGAC
CCTGCTCAAGGAGGACATTCGTCCTTCGGACATCCTGACTCGCCAGGCTT
TCGAGAACGCCATGGTCTTGGTCAACATCACTGGTGGCTCCACCAACGCC
GTTCTTCACTTGATTGCCATTGCGGACTCTGTTGGTATCAAGCTCGACAT
TGAAGACTTCCAGTCCGTCTCGGATCGCATTCCTTTCCTGGCGGACCTTA
AGCCTTCCGGCAAGTACGTCATGGCTGACCTTCACAAGATCGGTGGTACC
CCCTCCCTGCTCAAGTTCTTGCTGAAGGAAGGTCTCATCGATGGCTCTGG
CATGACTGTCACTGGTCAGACCCTGGCCAAGAACTTGGAGAATGTGCCGG
ACTTCCCTGAGGATCAGAAGATCATCCGTCCCCTGTCCAACCCCATCAAG
GAGACTGGCCACATCCAGATCTTGAGGGGTTCTCTGGCCCCGGGTGGCAG
TGTCGGCAAGATCACTGGTAAGGAAGGAACCGTCTTCACTGGAAAGGCTC
GCGTCTTTGACGACGAGGATGATTTCATTGCTGCTCTCGAGCGCAACGAG
ATCAAGAAGGAGGAGAAGACTGTTGTTGTCATCCGCTACACTGGTCCTAA
GGGAGGACCTGGCATGCCCGATGCTTCTTTCCCAAACCCGGGGGCGTATG
CCCTCCACTCTCCGGAGCATCGCCAAGCGCTCTTTGCTGAACAGAACCGT
CAAGGATGCCAGCCACGGCTGTATCACCGACTCTCTCGAATAAAAATGCT
GAAGCCCTCTTCCGCCCTGATGGGTGCCGGTCTCGGACAGTCCTGCGCTC
TGATCACCGATGGCCGTTTCTCTGGTGGTTCTCACGGTTTCTTGATCGGA
CACATTGTTCCCGAAGCCGCCGTCGGTGGCCCCATTGGCTTGGTTAAGGA
TGGTGATGTCATCACCATTGACGCCGAGAAGCGTGTTCTGGACCTTGATG
TTGAGGAGACCGAGCTCGCGCAAAGAAGAAAGCAGTGGGAAGCCGACAGG
GCTGCTGGCAAGCTCCCTCCCACCGGCCTGACCCTGAGAGGTACTCTCGG
CAAGTACGCTAGTCGCCCTCTGTCTACCACTCTGCCCAAGCAACAGAACG
GCAACGATGACGAGTATACTGGTCTCAACAAGGTCTCCCGCCACATTACC
CAGCCCATCTCCCAGGGTGCTTCCCAGGCCATGCTGTATGCCGCAGGCCT
CACTGAGGCGGACATGAACAAGGCTCAGGTCGGCATTTCTTCTGTCTGGT
ACAATGGCAACCCCTGCAACATGCATCTGCTCGATCTTAACAACCGTGTC
CGCGAGGGTGTCCAGAAGGCCGGTTTGGTCGGTTTCCAGTTCAACACCGT
CGGTGTTAGCGATGCTATCAGTATGGGTACCAAGGGAATGCGATTCTCTC
TCCAGAGTCGTGATCTGATTGCCGACTCTATCGAGACCGTTATGGGTGGT
CAATGGTATGACGCTAACATCAGCATTCCCGGCTGTGACAAGAACATGCC
TGGTGTGTTGATGGCAATGGGACGAGTGAACCGCCCCAGTTTGATGGTCT
ACGGTGGAACCATCAAGCCTGGTTGCGCCTCCATGCAGGGCAACGCCGAC
ATTGATATCGTCTCCGCCTTCCAGGCCTATGGTCAGTTCATCAGTAAGGA
AATCACCGAGCCCCAGAGATTTGACATTATCCGCAACGCCTGCCCTGGAG
GTGGTGCTTGCGGTGGTATGTACACTGCCAATACCATGGCCACTGCTATC
GAAGTCATGGGCATGACCCTTCCTGGATCCTCTTCCAACCCCGCCGAGTC
TGACGCTAAGTACCTTGAATGTCTTGCGGCTGGTGAGGCCATCAAGACCC
TGCTCAAGGAGGACATTCGTCCTTCGGACATCCTGACTCGCCAGGCTTTC
GAGAACGCCATGGTCTTGGTCAACATCACTGGTGGCTCCACCAACGCCGT
TCTTCACTTGATTGCCATTGCGGACTCTGTTGGTATCAAGCTCGACATTG
AAGACTTCCAGTCCGTCTCGGATCGCATTCCTTTCCTGGCGGACCTTAAG
CCTTCCGGCAAGTACGTCATGGCTGACCTTCACAAGATCGGTGGTACCCC
CTCCCTGCTCAAGTTCTTGCTGAAGGAAGGTCTCATCGATGGCTCTGGCA
TGACTGTCACTGGTCAGACCCTGGCCAAGAACTTGGAGAATGTGCCGGAC
TTCCCTGAGGATCAGAAGATCATCCGTCCCCTGTCCAACCCCATCAAGGA
GACTGGCCACATCCAGATCTTGAGGGGTTCTCTGGCCCCGGGTGGCAGTG
TCGGCAAGATCACTGGTAAGGAAGGAACCGTCTTCACTGGAAAGGCTCGC
GTCTTTGACGACGAGGATGATTTCATTGCTGCTCTCGAGCGCAACGAGAT
CAAGAAGGAGGAGAAGACTGTTGTTGTCATCCGCTACACTGGTCCTAAGG
GAGGACCTGGCATGCCCGATGCTTCTTTCCCAAACCCGGGGGCGTATGCC
CTCCACTCTCCGGAGCATCGCCAAGCGCTCTTTGCTGAACAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0004160 | dihydroxy-acid dehydratase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009082 | branched-chain amino acid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001068-T1.utr3p1 | KJC3_001068-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_001068-T1.utr5p1 | KJC3_001068-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037237 |
| DBxref | InterPro:IPR020558 |
| DBxref | InterPro:IPR000581 |
| DBxref | InterPro:IPR004404 |
| DBxref | InterPro:IPR042096 |
| DBxref | PFAM:PF00920 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch1 | supercontig | ch1:2705943..2708436 - |
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