You are here

Home

KJC3_001075-T1, KJC3_001075-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001075-T1
Unique NameKJC3_001075-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2729304..2732816-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001075-T1 ID=KJC3_001075-T1|Name=KJC3_001075-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3513bp|location=Sequence derived from alignment at ch1:2729304..2732816- (Aspergillus niger KJC3)
TGACGGTCAAAGGTCATTACTGTCTCATTTCATCATGATGAACAGCTCGC
TCAGATCAGCTGGAAGCGTCAAAAAGTTTACCGTGACGATTGATTAAGGC
CATCCATTTTGAAGCCGAAGTTCCCACAGACAGAATTGAAGCTATTCATG
TAACTGACGAGTAGTACTGCCGACCCCATCTTCTCATCCTGGACAATAGC
GACTCAGTATTAAGCAAAGGCGCGGATGAAGTCTGGAGGAGGACCTGAGG
CCTGAGGCCAGCAGAGGAACACCCCATGGGCACATGGGCCTTAGTCAGCC
CCCCACAATGCCAGGGGCTCTACACTTAATTACACTTTCTCACATTTCAC
TTGCCTGTTGCCTCTCGCCTTTCTTGCCACCACATTCCAGTCTACGATGA
TCAGCCTCCCACTTCTTTTGCAGTCTGTTGATGTACTATCACCACATGGT
TTTATTAACCAAACATAGACAAGGCACGGAAAAACCGGTCTATAGATGCA
GCCCTTCTGAGATGAGACAGGTCTGAAAGAACTAGTTGACTTGGCCACCG
ACCATTGCAGGGTTCGACCGGAGCCGGGAGTCCCCGAAAATCCCCGATTC
TTGGCACGGTGATCACGGTCAATGACAGGCGTGTAAGCGAAGCGAAGCAT
GCAATTGACTTTTGTTCGCTGAACGCGCTGCTAGCGGGAGAGAAAACGAG
CAGAAGTTGGAGACTACGATAGGTAGGGAGGCCTGATAACTCGGCTAAGG
TGAACAGCAATAACCGTCCAGCCGAAGCGAGGGTGCATGAGGTTAGCTAG
GGCGGGTGGTCGTGGTCTCAGAAGGCCTCATGACCGTCGTTCCGCTGGAA
TTTTGATCGAGTAAAGGAATTGCCTAAACGGGCCAGAATTGGAGATTTGA
TCGAGTAACAGCGGTGAGGAGGCAATCACTTGCAGCAGCCAGCAGGAGAG
GTCCGATGGCGGATGCCGGAGGCGCCCGATACCCCGACCCATGGTTCTAA
CTGGCCCAGGAGATAAGCCGGAAATTCTCTTCACTTTCCCCACGAGGGAA
TACGTCCCGAAGAGGCAACAATGAGGGTGTACAGACAAGGTGGTCGTCTA
GTGGAAAAGGCATCCTCCCGCTTGGAAAGGAGGGGAGGAAGCAGGAGAGG
AGACGGTCAAATATAACCTCCGGCTATCGATATCACGATAAGGATAGTTA
CCGGGGCAGGCAGTCACAGACAAACAGGTCAGGCGTGAAGAAAGAATGGG
CAAGGAAAAAAAAAAGACGCTTGGATGGCAAGCCGGTGGATCCGTCAAAG
GGGGTGGAGCCAGGTTTTTGTTACTCGATGGGATTATTTGGTTCGATCGC
CGTGGGTCTCCAGGGAACAATGGCGGCTTATCTGCGCAGACATTTAAAGC
CCTTATCGCAGCCAGCAATTCGTCCTCTCGCCTTCTTCATCCTTATCAAG
TCATTCATCCCTTGCCTTTTGACGCCGGTGGAGCTTTTCCGGATCAGTCT
ATCGCTTATCTCGTCTTTGCCTCTTTAACTTTTTATCGCCCATCCTGGCT
CTGATTGCTCTGCAGCTTCATCGTTCTTTGCATCTCTGGCTTCTCTTAGC
GCGCAATCCTTCCACGCGATCACCCTCACCATGGAGGCTTCTCAGATCCC
ATCCATTGCAGTGATCGCCTCGTCGCGCGCCGTCATCTCCGGCCGTTTGA
CATCAGCCACTATTGTCATCTCTCGCACCACCGGCAAGATCACGGCTGTC
TTTGATTCGGTGATCCCGGCTTCTGATTTCCCTGCTGGCACCCCCTATAC
TGATTATTCCCCCCACGTTCTGCTCCCCGGTCTGGTTGACGCCCATGTCC
ACCTGAACGAGCCGGGCCGCACCGAATGGGAGGGCTTCTACACCGGCACC
CAGGCGGCCGCTTTTGGCGGTGTCACCACGGTCATCGACATGCCCCTGAA
TGCTATCCCTCCCACCACCACGGTGGCCAACTTCAAGGAGAAACTCCGTG
CTGCCCAAGGGAAGTGCTGGGTTGATGTCGGTTTCTATGGCGGCATCATC
CCCGGCAATGCCGGCGACTTGAAAGCCCTTGTCCAGGAGGGTGTTCGCGG
CTTCAAGGGCTTCCTCATTGACAGCGGAGTAAGTCACGAGTTATCTTTTT
GCAAGGGACGTAAGTGTGCTGACACATGGCTGTAGGTCGACGAATTCCCC
GCCGTGTCTTCCGAAGACATCCGTAAGGCCATGGCTGAACTAGCGGATGA
GCCTACGACGCTCATGTTTCACGCCGAGATGCTGCCGCCCTCCACTGCAG
CCGAGGAGAAGGACCAAGCTCTCGAAGGTCCCGCAGAGGCGTATTCGACT
TTCCTCGCATCCCGTCCGTCGGCCTTTGAAACTTGTGCCGTGGAGGAGAT
CATTACCCTGTCTCAGGTGGCCCCCAAGCTCCCCCTCCACATTGTTCACC
TGTCTGCCATGGAAGCCATCCCTCTGTTGCGCAAAGCTCGCGCTGATGGC
GTCCCTATCACTGCGGAGACCTGCTTCCACTACCTGTCCTTAGCGGCCGA
GGAGATCCGGGATGGAGACACCCGCCACAAGTGTTGTCCACCCATCCGTT
CCCAGTCAAACCAGGACGCTCTTTGGGATGAGTTGGAGCGCCATGCGGAA
GATGGCGTGATTCAGACTGTTGTCTCGGACCACTCCCCCTGCACCCCTGA
TCTCAAGCTCCTACCATCGCACGTGCCTGGCTGCTGCCCGGACAGTACTC
AAGTTGACAATGAGGGTAGCTTCCTTTCCGCCTGGGGCGGTATCTCCTCA
GTGGGCCTCGGCCTTCCCATCCTGTGGACGGAGCTTAGCCGTCGCAAGGC
CTTGAAAGCTGCAGACGAAACCACGACCCAACAGGCCCTGCAGGACGTTG
TACGACTCTGCTGCACCAACACGGCCGTCCAGGTTGGCCTGCAGCACCAA
AAGGGAGACCTGGTTCCCGGCCACGACGCCGACATTTGTGTCTTCGATGA
CACCGCGGAATGGATCGTCGAACCCAGCACCATGCTCTTCCGCAACAAGT
GCTCACCGTACCAGGGCCGCAAGCTTCGTGGAATGGTCCGCGAGACCTGG
CTGCGTGGCGAGAAGATCTTCAGTCGCGACGATGGCTTCAGCACCAAGAC
GCCCTCCGGCGGCCTGCTTCTCGAGAAGCGTGCTTGTTAAGACCTCTCAT
CTCTCCTACCTGTCCCGAGTCACTCATCATCACCCTTTAGGACTGTTGAC
AGCCCAACAAGCGGATGATTCGACATCTCCTCGACACAATCACCTCTTTT
CTGCCGCAAGCATCCTTATCATCTCATATACACACACGCACACACGACCT
GGCATGATACCCGCAACCTGATGATTTACTAATAATGAGCATTCGCAGCA
TATACATCAGCGCATAGACTAGTATCCCATAAGCGACGGTGCAGACATTC
AGTTACTTATGCACCTCGATAGACACGAATATATCATCATCTTACTGGAA
CTCTTTCTCTTCT
back to top

Coding sequence (CDS) from alignment at ch1:2729304..2732816-

>KJC3_001075-T1 ID=KJC3_001075-T1|Name=KJC3_001075-T1|organism=Aspergillus niger KJC3|type=CDS|length=3006bp|location=Sequence derived from alignment at ch1:2729304..2732816- (Aspergillus niger KJC3)
GTCGACGAATTCCCCGCCGTGTCTTCCGAAGACATCCGTAAGGCCATGGC
TGAACTAGCGGATGAGCCTACGACGCTCATGTTTCACGCCGAGATGCTGC
CGCCCTCCACTGCAGCCGAGGAGAAGGACCAAGCTCTCGAAGGTCCCGCA
GAGGCGTATTCGACTTTCCTCGCATCCCGTCCGTCGGCCTTTGAAACTTG
TGCCGTGGAGGAGATCATTACCCTGTCTCAGGTGGCCCCCAAGCTCCCCC
TCCACATTGTTCACCTGTCTGCCATGGAAGCCATCCCTCTGTTGCGCAAA
GCTCGCGCTGATGGCGTCCCTATCACTGCGGAGACCTGCTTCCACTACCT
GTCCTTAGCGGCCGAGGAGATCCGGGATGGAGACACCCGCCACAAGTGTT
GTCCACCCATCCGTTCCCAGTCAAACCAGGACGCTCTTTGGGATGAGTTG
GAGCGCCATGCGGAAGATGGCGTGATTCAGACTGTTGTCTCGGACCACTC
CCCCTGCACCCCTGATCTCAAGCTCCTACCATCGCACGTGCCTGGCTGCT
GCCCGGACAGTACTCAAGTTGACAATGAGGGTAGCTTCCTTTCCGCCTGG
GGCGGTATCTCCTCAGTGGGCCTCGGCCTTCCCATCCTGTGGACGGAGCT
TAGCCGTCGCAAGGCCTTGAAAGCTGCAGACGAAACCACGACCCAACAGG
CCCTGCAGGACGTTGTACGACTCTGCTGCACCAACACGGCCGTCCAGGTT
GGCCTGCAGCACCAAAAGGGAGACCTGGTTCCCGGCCACGACGCCGACAT
TTGTGTCTTCGATGACACCGCGGAATGGATCGTCGAACCCAGCACCATGC
TCTTCCGCAACAAGTGCTCACCGTACCAGGGCCGCAAGCTTCGTGGAATG
GTCCGCGAGACCTGGCTGCGTGGCGAGAAGATCTTCAGTCGCGACGATGG
CTTCAGCACCAAGACGCCCTCCGGCGGCCTGCTTCTCGAGAAGCGTGCTT
GTTAAATGGAGGCTTCTCAGATCCCATCCATTGCAGTGATCGCCTCGTCG
CGCGCCGTCATCTCCGGCCGTTTGACATCAGCCACTATTGTCATCTCTCG
CACCACCGGCAAGATCACGGCTGTCTTTGATTCGGTGATCCCGGCTTCTG
ATTTCCCTGCTGGCACCCCCTATACTGATTATTCCCCCCACGTTCTGCTC
CCCGGTCTGGTTGACGCCCATGTCCACCTGAACGAGCCGGGCCGCACCGA
ATGGGAGGGCTTCTACACCGGCACCCAGGCGGCCGCTTTTGGCGGTGTCA
CCACGGTCATCGACATGCCCCTGAATGCTATCCCTCCCACCACCACGGTG
GCCAACTTCAAGGAGAAACTCCGTGCTGCCCAAGGGAAGTGCTGGGTTGA
TGTCGGTTTCTATGGCGGCATCATCCCCGGCAATGCCGGCGACTTGAAAG
CCCTTGTCCAGGAGGGTGTTCGCGGCTTCAAGGGCTTCCTCATTGACAGC
GGAGTCGACGAATTCCCCGCCGTGTCTTCCGAAGACATCCGTAAGGCCAT
GGCTGAACTAGCGGATGAGCCTACGACGCTCATGTTTCACGCCGAGATGC
TGCCGCCCTCCACTGCAGCCGAGGAGAAGGACCAAGCTCTCGAAGGTCCC
GCAGAGGCGTATTCGACTTTCCTCGCATCCCGTCCGTCGGCCTTTGAAAC
TTGTGCCGTGGAGGAGATCATTACCCTGTCTCAGGTGGCCCCCAAGCTCC
CCCTCCACATTGTTCACCTGTCTGCCATGGAAGCCATCCCTCTGTTGCGC
AAAGCTCGCGCTGATGGCGTCCCTATCACTGCGGAGACCTGCTTCCACTA
CCTGTCCTTAGCGGCCGAGGAGATCCGGGATGGAGACACCCGCCACAAGT
GTTGTCCACCCATCCGTTCCCAGTCAAACCAGGACGCTCTTTGGGATGAG
TTGGAGCGCCATGCGGAAGATGGCGTGATTCAGACTGTTGTCTCGGACCA
CTCCCCCTGCACCCCTGATCTCAAGCTCCTACCATCGCACGTGCCTGGCT
GCTGCCCGGACAGTACTCAAGTTGACAATGAGGGTAGCTTCCTTTCCGCC
TGGGGCGGTATCTCCTCAGTGGGCCTCGGCCTTCCCATCCTGTGGACGGA
GCTTAGCCGTCGCAAGGCCTTGAAAGCTGCAGACGAAACCACGACCCAAC
AGGCCCTGCAGGACGTTGTACGACTCTGCTGCACCAACACGGCCGTCCAG
GTTGGCCTGCAGCACCAAAAGGGAGACCTGGTTCCCGGCCACGACGCCGA
CATTTGTGTCTTCGATGACACCGCGGAATGGATCGTCGAACCCAGCACCA
TGCTCTTCCGCAACAAGTGCTCACCGTACCAGGGCCGCAAGCTTCGTGGA
ATGGTCCGCGAGACCTGGCTGCGTGGCGAGAAGATCTTCAGTCGCGACGA
TGGCTTCAGCACCAAGACGCCCTCCGGCGGCCTGCTTCTCGAGAAGCGTG
CTTGTTAAATGGAGGCTTCTCAGATCCCATCCATTGCAGTGATCGCCTCG
TCGCGCGCCGTCATCTCCGGCCGTTTGACATCAGCCACTATTGTCATCTC
TCGCACCACCGGCAAGATCACGGCTGTCTTTGATTCGGTGATCCCGGCTT
CTGATTTCCCTGCTGGCACCCCCTATACTGATTATTCCCCCCACGTTCTG
CTCCCCGGTCTGGTTGACGCCCATGTCCACCTGAACGAGCCGGGCCGCAC
CGAATGGGAGGGCTTCTACACCGGCACCCAGGCGGCCGCTTTTGGCGGTG
TCACCACGGTCATCGACATGCCCCTGAATGCTATCCCTCCCACCACCACG
GTGGCCAACTTCAAGGAGAAACTCCGTGCTGCCCAAGGGAAGTGCTGGGT
TGATGTCGGTTTCTATGGCGGCATCATCCCCGGCAATGCCGGCGACTTGA
AAGCCCTTGTCCAGGAGGGTGTTCGCGGCTTCAAGGGCTTCCTCATTGAC
AGCGGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000256allantoin catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016810hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
GO:0016812hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides
GO:0004038allantoinase activity
GO:0008270zinc ion binding
GO:0050897cobalt ion binding
GO:0016787hydrolase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001075KJC3_001075Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001075-T1KJC3_001075-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001075-T1.cdsKJC3_001075-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001075-T1.utr3p1KJC3_001075-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001075-T1.exon3KJC3_001075-T1.exon3Aspergillus niger KJC3exon
KJC3_001075-T1.exon2KJC3_001075-T1.exon2Aspergillus niger KJC3exon
KJC3_001075-T1.exon1KJC3_001075-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001075-T1.utr5p2KJC3_001075-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001075-T1.utr5p1KJC3_001075-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteMEROPS:MER0005767
DBxrefInterPro:IPR011059
DBxrefInterPro:IPR032466
DBxrefInterPro:IPR002195
DBxrefInterPro:IPR017593
DBxrefInterPro:IPR006680
DBxrefPFAM:PF01979
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2729304..2732816 -
Powered by Drupal