You are here

Home

KJC3_001079-T1, KJC3_001079-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001079-T1
Unique NameKJC3_001079-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2740943..2742843-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001079-T1 ID=KJC3_001079-T1|Name=KJC3_001079-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1901bp|location=Sequence derived from alignment at ch1:2740943..2742843- (Aspergillus niger KJC3)
AGCTGGAAAAAATAATTGCTCCCGGCTGGCGGGCCTTGAAATGCTGCGGG
TGGCTGATTTGGCAGGCAAGCGGGCCTTGGTTGACAGGCATCCCCGGCCT
TGCCTGAATGCCTCGATGCCTGCAAAACTCGGCATTCATAGCCGACCTCG
TGTTCTCCTCGCTTCTCTTTGTCCAACTTCGCCTTGACAACGCCCGGTGC
TCTTCAGCTATTGTTCTTCGGAATAATCTTAACCAGAATCATCCCGCCGC
TATTGCTGTTATGATTCTCTTCTTGTGTGGTTAAACACATCCCTCCTAAC
AACCAAATCTCTTATTCCGGACTGCTGCGCGTCCCGGCATCCAAAGGCTA
TCACTCTTCAAGCAAATATGGCTCCCGTTGGTCTCCTGACTAAACTCAGG
ACTTTAATCACCAAGGACTATGGTAAACTTGTGAACTATAAGATTCTTCT
ATCTTTGTCTGACTTATTCCGTAGATGAGCCTGCCATTTCAACACAAACA
GCCGCCTTTCTCTCGGTATGCATTTCTGACCATCAGCTCCTACCAACTCT
CCCACGTGCTTTTGGCCTTCTTATTGCTCTTCTGGCCAGTATCTGATTCA
AGTACTAGGTTTGCCTCACCCTCGTCTATGTGGTTCCCTTTTATGTGAAC
CCGACGACCCGGCCATCGCCCACCCTGAGTAGAGATGCGCCGTCGGTAAT
CCGGGCCAGAATTAGAGCAGTGACATTTTCATGCACCATTAGCAGCCTGG
TCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCCTCTTTCTCTCGAGCT
CTCCATTTCCTGGGGTGGTGGCCTATTGGTCTCGTGGATATCTTCCGCGG
CCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACTGTTTGAGCGCGGTG
TTGCCGAGGGCGAGTGGAGAGAGTGGATTCGGGGAGGAAGAGTCACTGCA
TCGCTTCGCAGCTGGATTGGATGGAGGAATTATGTCGCGGTAAGTCCAGT
TTGCGACGGCAATGTCTGGCTTTAAGATTAACTGGGCGATGCAGGGTCCC
ATCACCGAGGAGGTCATGTTCCGCTCAGCCATTGTCCCCCTTCATCTCCT
TGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCTATTTCG
GCATTGCTCACGTACACCATTTCTACGAGTTTCGCCTCACGCATCCTGAT
ACATCGATTATCGCAGCGATATTGAGATCAGTCTTTCAATTCGGTTACAC
AACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTGGCTCTC
TTCTGGCAGTTATTCTTGCCCACACTTTCTGCAACTGGTGCGGATTACCG
CGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCCCCCATGGT
CAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTCTTGGCT
GGACCGTCGCATACTACGTAATCCTGGTCGCGGGAGCTATTGGCTTCTTC
CAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCCAGCTTTTC
TGGTGCGACAAAATAAATATATTAATGAGAAACCAGCATCTAGCGGGCGG
ATGATCTGAAGGATTGCAGCATCGACTTTTTGTCTGTCTCGTGCCAAATC
GCGAGCTTTTCGGCCCATGGATTTGTCTGCCATTATAGCGACAAGCATTA
TTGTGAATAGCTTGACCGCATGCATCCTTGTTATGACCATAGTATTGTTA
ATGTCCAACTCCTCAGTTTGATCGAAGTGCACTATTATATATGCATCATG
GCGTTTCGTTGCAGCACTACAGGCAGTCTAGGATTTGGGCACTTGTTGAG
CAAAGGTTTAACAATAATATATGAAATTAATATGTACTATTCAAGTGAGA
A
back to top

Coding sequence (CDS) from alignment at ch1:2740943..2742843-

>KJC3_001079-T1 ID=KJC3_001079-T1|Name=KJC3_001079-T1|organism=Aspergillus niger KJC3|type=CDS|length=3996bp|location=Sequence derived from alignment at ch1:2740943..2742843- (Aspergillus niger KJC3)
GGTCCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATTGTCCCCCTTCA
TCTCCTTGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCT
ATTTCGGCATTGCTCACGTACACCATTTCTACGAGTTTCGCCTCACGCAT
CCTGATACATCGATTATCGCAGCGATATTGAGATCAGTCTTTCAATTCGG
TTACACAACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTG
GCTCTCTTCTGGCAGTTATTCTTGCCCACACTTTCTGCAACTGGTGCGGA
TTACCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCCCC
CATGGTCAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTC
TTGGCTGGACCGTCGCATACTACGTAATCCTGGTCGCGGGAGCTATTGGC
TTCTTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCCAG
CTTTTCTGGTGCGACAAAATAAGTTTGCCTCACCCTCGTCTATGTGGTTC
CCTTTTATGTGAACCCGACGACCCGGCCATCGCCCACCCTGAGTAGAGAT
GCGCCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCAC
CATTAGCAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCCT
CTTTCTCTCGAGCTCTCCATTTCCTGGGGTGGTGGCCTATTGGTCTCGTG
GATATCTTCCGCGGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACT
GTTTGAGCGCGGTGTTGCCGAGGGCGAGTGGAGAGAGTGGATTCGGGGAG
GAAGAGTCACTGCATCGCTTCGCAGCTGGATTGGATGGAGGAATTATGTC
GCGATGAGCCTGCCATTTCAACACAAACAGCCGCCTTTCTCTCGATGGCT
CCCGTTGGTCTCCTGACTAAACTCAGGACTTTAATCACCAAGGACTATGG
GTCCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATTGTCCCCCTTCAT
CTCCTTGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCTA
TTTCGGCATTGCTCACGTACACCATTTCTACGAGTTTCGCCTCACGCATC
CTGATACATCGATTATCGCAGCGATATTGAGATCAGTCTTTCAATTCGGT
TACACAACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTGG
CTCTCTTCTGGCAGTTATTCTTGCCCACACTTTCTGCAACTGGTGCGGAT
TACCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCCCCC
ATGGTCAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTCT
TGGCTGGACCGTCGCATACTACGTAATCCTGGTCGCGGGAGCTATTGGCT
TCTTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCCAGC
TTTTCTGGTGCGACAAAATAAGTTTGCCTCACCCTCGTCTATGTGGTTCC
CTTTTATGTGAACCCGACGACCCGGCCATCGCCCACCCTGAGTAGAGATG
CGCCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCACC
ATTAGCAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCCTC
TTTCTCTCGAGCTCTCCATTTCCTGGGGTGGTGGCCTATTGGTCTCGTGG
ATATCTTCCGCGGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACTG
TTTGAGCGCGGTGTTGCCGAGGGCGAGTGGAGAGAGTGGATTCGGGGAGG
AAGAGTCACTGCATCGCTTCGCAGCTGGATTGGATGGAGGAATTATGTCG
CGATGAGCCTGCCATTTCAACACAAACAGCCGCCTTTCTCTCGATGGCTC
CCGTTGGTCTCCTGACTAAACTCAGGACTTTAATCACCAAGGACTATGGG
TCCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATTGTCCCCCTTCATC
TCCTTGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCTAT
TTCGGCATTGCTCACGTACACCATTTCTACGAGTTTCGCCTCACGCATCC
TGATACATCGATTATCGCAGCGATATTGAGATCAGTCTTTCAATTCGGTT
ACACAACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTGGC
TCTCTTCTGGCAGTTATTCTTGCCCACACTTTCTGCAACTGGTGCGGATT
ACCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCCCCCA
TGGTCAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTCTT
GGCTGGACCGTCGCATACTACGTAATCCTGGTCGCGGGAGCTATTGGCTT
CTTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCCAGCT
TTTCTGGTGCGACAAAATAAGTTTGCCTCACCCTCGTCTATGTGGTTCCC
TTTTATGTGAACCCGACGACCCGGCCATCGCCCACCCTGAGTAGAGATGC
GCCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCACCA
TTAGCAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCCTCT
TTCTCTCGAGCTCTCCATTTCCTGGGGTGGTGGCCTATTGGTCTCGTGGA
TATCTTCCGCGGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACTGT
TTGAGCGCGGTGTTGCCGAGGGCGAGTGGAGAGAGTGGATTCGGGGAGGA
AGAGTCACTGCATCGCTTCGCAGCTGGATTGGATGGAGGAATTATGTCGC
GATGAGCCTGCCATTTCAACACAAACAGCCGCCTTTCTCTCGATGGCTCC
CGTTGGTCTCCTGACTAAACTCAGGACTTTAATCACCAAGGACTATGGGT
CCCATCACCGAGGAGGTCATGTTCCGCTCAGCCATTGTCCCCCTTCATCT
CCTTGCCAAGGTTGATCCCGGCCGCATTGTATTTGTGGCTCCTCTCTATT
TCGGCATTGCTCACGTACACCATTTCTACGAGTTTCGCCTCACGCATCCT
GATACATCGATTATCGCAGCGATATTGAGATCAGTCTTTCAATTCGGTTA
CACAACGATTTTCGGCTGGTATGCCACCTTTGTCTACCTTCGTACTGGCT
CTCTTCTGGCAGTTATTCTTGCCCACACTTTCTGCAACTGGTGCGGATTA
CCGCGATTGTGGGGAAGAGTAGAGGCGGGCGTACCCATCGGGCCCCCCAT
GGTCAAAGGAAAAGGATCCTCAGACGTGACATACGGTCAACTCAGTCTTG
GCTGGACCGTCGCATACTACGTAATCCTGGTCGCGGGAGCTATTGGCTTC
TTCCAAACGCTATGGCCTTTGACAGAATCATTGAACGCATTGGCCAGCTT
TTCTGGTGCGACAAAATAAGTTTGCCTCACCCTCGTCTATGTGGTTCCCT
TTTATGTGAACCCGACGACCCGGCCATCGCCCACCCTGAGTAGAGATGCG
CCGTCGGTAATCCGGGCCAGAATTAGAGCAGTGACATTTTCATGCACCAT
TAGCAGCCTGGTCGTCTTATGGCTAGTTGCTGCCAAAGAAAACGCCTCTT
TCTCTCGAGCTCTCCATTTCCTGGGGTGGTGGCCTATTGGTCTCGTGGAT
ATCTTCCGCGGCCTGCTTCTCACAGCCATCCTTTTCGCCGGTCCACTGTT
TGAGCGCGGTGTTGCCGAGGGCGAGTGGAGAGAGTGGATTCGGGGAGGAA
GAGTCACTGCATCGCTTCGCAGCTGGATTGGATGGAGGAATTATGTCGCG
ATGAGCCTGCCATTTCAACACAAACAGCCGCCTTTCTCTCGATGGCTCCC
GTTGGTCTCCTGACTAAACTCAGGACTTTAATCACCAAGGACTATG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0004197cysteine-type endopeptidase activity
Vocabulary: Biological Process
TermDefinition
GO:0071586CAAX-box protein processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001079KJC3_001079Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001079-T1KJC3_001079-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001079-T1.cdsKJC3_001079-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001079-T1.utr3p1KJC3_001079-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001079-T1.exon4KJC3_001079-T1.exon4Aspergillus niger KJC3exon
KJC3_001079-T1.exon3KJC3_001079-T1.exon3Aspergillus niger KJC3exon
KJC3_001079-T1.exon2KJC3_001079-T1.exon2Aspergillus niger KJC3exon
KJC3_001079-T1.exon1KJC3_001079-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001079-T1.utr5p1KJC3_001079-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09263IMF
NoteMEROPS:MER0004246
DBxrefInterPro:IPR003675
DBxrefPFAM:PF02517
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2740943..2742843 -
Powered by Drupal