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KJC3_001081-T2, KJC3_001081-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_001081-T2
Unique NameKJC3_001081-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch1:2745779..2747857-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_001081-T2 ID=KJC3_001081-T2|Name=KJC3_001081-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2079bp|location=Sequence derived from alignment at ch1:2745779..2747857- (Aspergillus niger KJC3)
CTACACAGATGATTCCATTCAATTAAATTACTGTTATTATGGAGAGGAGA
GGTCCAACTCCAGGCTCTGGCTCATATGGTAAAGCTTGCAGACAATGCTC
CAAGGCCAAGTGTCGGTGCGTAGCTCGACCCGACGGTACCGGCTGCGAAA
GGTAAGCGTCTAAGTATGAGTATTGACTTGATTCTAATCACCACTCAGAT
GTCTGCGTCTCAAGAAACAATGCCAGCCATCAGAACCAACTCGTAGGAAA
CCTCATCGGAATCCCGAGTCGGGTACGCAGATAGCGAAGCTTGAGGGGAG
GATTGATAGCCTCACGGCAATGCTTCGATCTGTCGCACATGCCGCTGGAG
TATCTAGCAATCTGCAAACTAGTTCGAATGCTAGTACAAATGAAGATCTC
AGCAACTTAGCTATCCCTGACACTAATCATGACAGCGTACTGGTGCCACC
ATCATTCACTACTGCACCGTCTCAATCGACTACGACTCCGTCTCCTTGCA
ATGGCTCGAGCCAGCCATTAGCACCACAGCCACCCCTATATGAGTTGAAC
CTAGACGAGGCATCCTGGTATCTCGAACGCTTCACGACGAACATGCTGCC
ATGCTTCCCTTTCATCTGTCTGCCACCAAACACAACTACGCAGCAGTTGC
AAGAAGACCGGCCATTTCTCCTCGAGGCCATCATTGCGGTAGCTACGCCC
TCAACCCAGGTGAAACTAGCACGCACAGATAGATTGAAATCTCGCTTAAC
TAAGTCAGCTATGCTTGAGAACCAGTCCAGCATTGATATGCTGCTAAGCA
TCCTGACTTACATTGCATGGAGTACGGATCCTTTCGTCAAACGCGCAAGT
AATTTGTCTCGCATGATAATGCTCGCTATTTCTATGGTCTATGATCTCCA
ACTGGACAAGCAGCCACCACCCGAGGTGCCCATAATAGCGAAGATGGCAC
CCGGGCTGGAAAATCCGGAGCAGAATGCAAGTAATAATTCCCTGCAAGGG
ATTTTGGAGCAGCATCGAGCGGCATTGGCTTGCTTTGTTCTCAGCTCGAT
GTAGGCATAGCCCTATCCTTATATTGTCACTGGAGCGTGTCTTTCCACTG
ACATGACTGCACCCCAGCATCTCATCCACCGTTGGCCGCATAGCTTCACT
CCGGTGGAACATCCAAATGGAACATGCCCTAAATATAATCGAGACGAATA
AAGAAAGCCCATCAGACGAGTATCTCACAGCCCAGATCCGTTTACAGATC
CTCGCCCAAAAGGCCTTATCCCTCCGTGACCCAGACGAGCCATCCCCCTC
CACAACACCTCCAGCCACAACCATGTATCTCAAGGTACTCCAAAGACAAC
TAACTGAACTCCAATCCTCAATCCCACCACATCTCCCCCATTACGGTGAG
TAATTACTTTAATTATCCCTAGTCACCCATACTAAATAAACTCCCAGAAC
TCCTCCACCTCCAAACCCACTACATCTCCCTCCTCCTCCACGAAACCCCC
CGCCCCGCCAGCTCCAGCACCCCTCTACTCCCCAGCACCCCAGACTCCCT
AACCTCCCTCTGGAACTCAGTCCAAGCCATTAAATCCTGGCTCTCGACGT
TCCAAACCCTCCCCGCATCAACCATCACCGGATTCCCTTTCTTCATGTGG
TTCCAACTCGTCCGATGCATCGTACTCCTGAAACATCTCTCCACGTTCGA
GGACCCAGCATGGGACCGCGATGCCGTGCGGCAGGAGGTGGATATGCTGG
CGTTGCTGGAGTGGATGGGGGAGAAGGCTGAGATGGCTAGTTTGGAGGCT
GGGGAGGGGTCGGATGATGATTTGTTTCGGAGAGTGGGGAGGATGTTGAG
GTTGGCGAGGGAGTGGGTGGTTAAGAAGATGAGGGGGGAGGTGGGTGGGG
ATGGATTGGTGTCTGAGGAGAATAGTGAGGGTAGTAATGAAGGTAGTAGT
GGTACAATGGGTATAGATATGGATATGGATATGACTGATATGGCGTGGAT
GCATGCGCTGGAATCTGGGGATGGAGGTTGGCTTGAGGAGGTGCTGGGGT
GGTCGCCGCTTGCTGTTCATAATATCTAG
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Coding sequence (CDS) from alignment at ch1:2745779..2747857-

>KJC3_001081-T2 ID=KJC3_001081-T2|Name=KJC3_001081-T2|organism=Aspergillus niger KJC3|type=CDS|length=4104bp|location=Sequence derived from alignment at ch1:2745779..2747857- (Aspergillus niger KJC3)
AACTCCTCCACCTCCAAACCCACTACATCTCCCTCCTCCTCCACGAAACC
CCCCGCCCCGCCAGCTCCAGCACCCCTCTACTCCCCAGCACCCCAGACTC
CCTAACCTCCCTCTGGAACTCAGTCCAAGCCATTAAATCCTGGCTCTCGA
CGTTCCAAACCCTCCCCGCATCAACCATCACCGGATTCCCTTTCTTCATG
TGGTTCCAACTCGTCCGATGCATCGTACTCCTGAAACATCTCTCCACGTT
CGAGGACCCAGCATGGGACCGCGATGCCGTGCGGCAGGAGGTGGATATGC
TGGCGTTGCTGGAGTGGATGGGGGAGAAGGCTGAGATGGCTAGTTTGGAG
GCTGGGGAGGGGTCGGATGATGATTTGTTTCGGAGAGTGGGGAGGATGTT
GAGGTTGGCGAGGGAGTGGGTGGTTAAGAAGATGAGGGGGGAGGTGGGTG
GGGATGGATTGGTGTCTGAGGAGAATAGTGAGGGTAGTAATGAAGGTAGT
AGTGGTACAATGGGTATAGATATGGATATGGATATGACTGATATGGCGTG
GATGCATGCGCTGGAATCTGGGGATGGAGGTTGGCTTGAGGAGGTGCTGG
GGTGGTCGCCGCTTGCTGTTCATAATATCTAGCATCTCATCCACCGTTGG
CCGCATAGCTTCACTCCGGTGGAACATCCAAATGGAACATGCCCTAAATA
TAATCGAGACGAATAAAGAAAGCCCATCAGACGAGTATCTCACAGCCCAG
ATCCGTTTACAGATCCTCGCCCAAAAGGCCTTATCCCTCCGTGACCCAGA
CGAGCCATCCCCCTCCACAACACCTCCAGCCACAACCATGTATCTCAAGG
TACTCCAAAGACAACTAACTGAACTCCAATCCTCAATCCCACCACATCTC
CCCCATTACGATGCTGCCATGCTTCCCTTTCATCTGTCTGCCACCAAACA
CAACTACGCAGCAGTTGCAAGAAGACCGGCCATTTCTCCTCGAGGCCATC
ATTGCGGTAGCTACGCCCTCAACCCAGGTGAAACTAGCACGCACAGATAG
ATTGAAATCTCGCTTAACTAAGTCAGCTATGCTTGAGAACCAGTCCAGCA
TTGATATGCTGCTAAGCATCCTGACTTACATTGCATGGAGTACGGATCCT
TTCGTCAAACGCGCAAGTAATTTGTCTCGCATGATAATGCTCGCTATTTC
TATGGTCTATGATCTCCAACTGGACAAGCAGCCACCACCCGAGGTGCCCA
TAATAGCGAAGATGGCACCCGGGCTGGAAAATCCGGAGCAGAATGCAAGT
AATAATTCCCTGCAAGGGATTTTGGAGCAGCATCGAGCGGCATTGGCTTG
CTTTGTTCTCAGCTCGATAACTCCTCCACCTCCAAACCCACTACATCTCC
CTCCTCCTCCACGAAACCCCCCGCCCCGCCAGCTCCAGCACCCCTCTACT
CCCCAGCACCCCAGACTCCCTAACCTCCCTCTGGAACTCAGTCCAAGCCA
TTAAATCCTGGCTCTCGACGTTCCAAACCCTCCCCGCATCAACCATCACC
GGATTCCCTTTCTTCATGTGGTTCCAACTCGTCCGATGCATCGTACTCCT
GAAACATCTCTCCACGTTCGAGGACCCAGCATGGGACCGCGATGCCGTGC
GGCAGGAGGTGGATATGCTGGCGTTGCTGGAGTGGATGGGGGAGAAGGCT
GAGATGGCTAGTTTGGAGGCTGGGGAGGGGTCGGATGATGATTTGTTTCG
GAGAGTGGGGAGGATGTTGAGGTTGGCGAGGGAGTGGGTGGTTAAGAAGA
TGAGGGGGGAGGTGGGTGGGGATGGATTGGTGTCTGAGGAGAATAGTGAG
GGTAGTAATGAAGGTAGTAGTGGTACAATGGGTATAGATATGGATATGGA
TATGACTGATATGGCGTGGATGCATGCGCTGGAATCTGGGGATGGAGGTT
GGCTTGAGGAGGTGCTGGGGTGGTCGCCGCTTGCTGTTCATAATATCTAG
CATCTCATCCACCGTTGGCCGCATAGCTTCACTCCGGTGGAACATCCAAA
TGGAACATGCCCTAAATATAATCGAGACGAATAAAGAAAGCCCATCAGAC
GAGTATCTCACAGCCCAGATCCGTTTACAGATCCTCGCCCAAAAGGCCTT
ATCCCTCCGTGACCCAGACGAGCCATCCCCCTCCACAACACCTCCAGCCA
CAACCATGTATCTCAAGGTACTCCAAAGACAACTAACTGAACTCCAATCC
TCAATCCCACCACATCTCCCCCATTACGATGCTGCCATGCTTCCCTTTCA
TCTGTCTGCCACCAAACACAACTACGCAGCAGTTGCAAGAAGACCGGCCA
TTTCTCCTCGAGGCCATCATTGCGGTAGCTACGCCCTCAACCCAGGTGAA
ACTAGCACGCACAGATAGATTGAAATCTCGCTTAACTAAGTCAGCTATGC
TTGAGAACCAGTCCAGCATTGATATGCTGCTAAGCATCCTGACTTACATT
GCATGGAGTACGGATCCTTTCGTCAAACGCGCAAGTAATTTGTCTCGCAT
GATAATGCTCGCTATTTCTATGGTCTATGATCTCCAACTGGACAAGCAGC
CACCACCCGAGGTGCCCATAATAGCGAAGATGGCACCCGGGCTGGAAAAT
CCGGAGCAGAATGCAAGTAATAATTCCCTGCAAGGGATTTTGGAGCAGCA
TCGAGCGGCATTGGCTTGCTTTGTTCTCAGCTCGATAACTCCTCCACCTC
CAAACCCACTACATCTCCCTCCTCCTCCACGAAACCCCCCGCCCCGCCAG
CTCCAGCACCCCTCTACTCCCCAGCACCCCAGACTCCCTAACCTCCCTCT
GGAACTCAGTCCAAGCCATTAAATCCTGGCTCTCGACGTTCCAAACCCTC
CCCGCATCAACCATCACCGGATTCCCTTTCTTCATGTGGTTCCAACTCGT
CCGATGCATCGTACTCCTGAAACATCTCTCCACGTTCGAGGACCCAGCAT
GGGACCGCGATGCCGTGCGGCAGGAGGTGGATATGCTGGCGTTGCTGGAG
TGGATGGGGGAGAAGGCTGAGATGGCTAGTTTGGAGGCTGGGGAGGGGTC
GGATGATGATTTGTTTCGGAGAGTGGGGAGGATGTTGAGGTTGGCGAGGG
AGTGGGTGGTTAAGAAGATGAGGGGGGAGGTGGGTGGGGATGGATTGGTG
TCTGAGGAGAATAGTGAGGGTAGTAATGAAGGTAGTAGTGGTACAATGGG
TATAGATATGGATATGGATATGACTGATATGGCGTGGATGCATGCGCTGG
AATCTGGGGATGGAGGTTGGCTTGAGGAGGTGCTGGGGTGGTCGCCGCTT
GCTGTTCATAATATCTAGCATCTCATCCACCGTTGGCCGCATAGCTTCAC
TCCGGTGGAACATCCAAATGGAACATGCCCTAAATATAATCGAGACGAAT
AAAGAAAGCCCATCAGACGAGTATCTCACAGCCCAGATCCGTTTACAGAT
CCTCGCCCAAAAGGCCTTATCCCTCCGTGACCCAGACGAGCCATCCCCCT
CCACAACACCTCCAGCCACAACCATGTATCTCAAGGTACTCCAAAGACAA
CTAACTGAACTCCAATCCTCAATCCCACCACATCTCCCCCATTACGATGC
TGCCATGCTTCCCTTTCATCTGTCTGCCACCAAACACAACTACGCAGCAG
TTGCAAGAAGACCGGCCATTTCTCCTCGAGGCCATCATTGCGGTAGCTAC
GCCCTCAACCCAGGTGAAACTAGCACGCACAGATAGATTGAAATCTCGCT
TAACTAAGTCAGCTATGCTTGAGAACCAGTCCAGCATTGATATGCTGCTA
AGCATCCTGACTTACATTGCATGGAGTACGGATCCTTTCGTCAAACGCGC
AAGTAATTTGTCTCGCATGATAATGCTCGCTATTTCTATGGTCTATGATC
TCCAACTGGACAAGCAGCCACCACCCGAGGTGCCCATAATAGCGAAGATG
GCACCCGGGCTGGAAAATCCGGAGCAGAATGCAAGTAATAATTCCCTGCA
AGGGATTTTGGAGCAGCATCGAGCGGCATTGGCTTGCTTTGTTCTCAGCT
CGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0042025host cell nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_001081KJC3_001081Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001081-T2KJC3_001081-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001081-T2.cdsKJC3_001081-T2.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001081-T2.exon5KJC3_001081-T2.exon5Aspergillus niger KJC3exon
KJC3_001081-T2.exon4KJC3_001081-T2.exon4Aspergillus niger KJC3exon
KJC3_001081-T2.exon3KJC3_001081-T2.exon3Aspergillus niger KJC3exon
KJC3_001081-T2.exon2KJC3_001081-T2.exon2Aspergillus niger KJC3exon
KJC3_001081-T2.exon1KJC3_001081-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_001081-T2.utr5p3KJC3_001081-T2.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_001081-T2.utr5p2KJC3_001081-T2.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_001081-T2.utr5p1KJC3_001081-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR001138
DBxrefInterPro:IPR036864
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch1supercontigch1:2745779..2747857 -
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